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Order

Pathway Rat Rattus norvegicus

Read this first

Every rat pathway in Reactome is electronically inferred from the curated human one; Reactome's own sentence about that stands beside the record below.

Signaling by Interleukins

R-RNO-449147 in Reactome release 97: under Cytokine Signaling in Immune system, with 266 genes placed in it by the mapping files and 11 child pathways in the hierarchy.

The same number in the other species

Reactome writes the mouse and rat events it infers from a human pathway under the human number with the species token. A door opens only where that species' own list in this release holds the id: R-HSA-449147 (human), R-MMU-449147 (mouse). Whether the event was inferred from this one is what the record says.

01The record

Reactome's own record of this pathway

What this tells you

The pathway list, the hierarchy and the genes on this page are read from the files Reactome publishes for Reactome release 97, built into this site on 2026-09-09: the pathway list, the hierarchy relationship file and the two gene mapping files. The record card is the one live read, Reactome's own record of this pathway.

Reactome's download page describes the mapping files: Mapping files link the source database identifier to the lowest level pathway diagram or subset of the pathway, all levels of the pathway hierarchy or database identifier to all reactions. [R13] The gene list here is the all-levels mapping of NCBI Gene ids, filled from the all-levels mapping of Ensembl ids where the NCBI file has no row for a gene; each row names which file it came from by the shape of its source id. Each row carries the evidence codes the file writes for it, as written and unranked, and both where the file writes both; no page of Reactome's documentation the survey read defines the codes, so this page does not expand them. A gene id the identity files do not name is kept as the source's own id with no door rather than turned into a symbol.

Every rat pathway in Reactome is inferred from the curated human one: We use the set of manually curated human reactions to electronically infer reactions in fourteen evolutionarily divergent eukaryotic species for which high-quality whole-genome sequence data are available, and hence a comprehensive and high-quality set of protein predictions exists. [R11] Reactome's own sentence about what that produces is printed beside the record: The electronically inferred reactions presented in Reactome are thus not data, but hypotheses useful to direct the design of confirmatory experiments. [R11]

On citing what a search finds, Reactome says: It should be remembered that while we strive to contain the most current and accurate data, Reactome should not be used in citations where other primary sources of information are available. [R12] The record card prints the literature Reactome attaches to a curated pathway for that reason. The data are public domain: All data in the Reactome database and files derived from that data are licensed under the Creative Commons Public Domain Dedication (CC0). User may copy, modify, and distribute these data, even for commercial purposes, without asking for permission. Attribution is encouraged but not required. [R10] The pathway illustrations are licensed apart, under CC BY 4.0, and none is shown here.

A gene on this list is one Reactome places in this pathway in this release, and that is all the row says: it does not say the gene is expressed in a tissue or associated with a disease, which are the other two explorers' questions, read from other sources. Reactome's papers of record are [R01] [R02].

  1. [R01] Ragueneau E, Gong C, Sinquin P, Sevilla C, Beavers D, Grentner A, et al. (2026). The Reactome Knowledgebase 2026. Nucleic Acids Research 54:D673-D681. PMID 41251150, doi 10.1093/nar/gkaf1223.
  2. [R02] Milacic M, Beavers D, Conley P, Gong C, Gillespie M, Griss J, et al. (2024). The Reactome Pathway Knowledgebase 2024. Nucleic Acids Research 52:D672-D678. PMID 37941124, doi 10.1093/nar/gkad1025.
  3. [R10] Reactome, reactome.org. License Agreement. https://reactome.org/license, read 2026-09-09.
  4. [R11] Reactome, reactome.org. Computationally inferred events. https://reactome.org/documentation/inferred-events, read 2026-09-09.
  5. [R12] Reactome, reactome.org. Citing us. https://reactome.org/cite, read 2026-09-09.
  6. [R13] Reactome, reactome.org. Download. https://reactome.org/download-data, read 2026-09-09.
Reading this pathway's record from Reactome (the pathway record).Still reading. A first read of a pathway can take a while; this page waits up to 35 seconds for it, and its scripts then bring in the panel, or a line saying what did not arrive.

02The genes

Genes Reactome places in this rat pathway

The mapping files place 266 genes in this rat pathway; showing 201 to 266, in pages of 100, sorted by symbol for reading. The order carries no ranking.

Genes Reactome places in this rat pathway, page 3 of 3
GenePsmd13Authority365388Mapping file id365388 NCBI fileEvidenceIEA
GenePsmd14Authority311078Mapping file id311078 NCBI fileEvidenceIEA
GenePsmd2Authority287984Mapping file id287984 NCBI fileEvidenceIEA
GenePsmd3Authority287670Mapping file idENSRNOG00000028103 Ensembl fileEvidenceIEA
GenePsmd6Authority289924Mapping file idENSRNOG00000006751 Ensembl fileEvidenceIEA
GenePsmd7Authority307821Mapping file idENSRNOG00000014097 Ensembl fileEvidenceIEA
GenePsmd8Authority292766Mapping file id292766 NCBI fileEvidenceIEA
GenePtk2bAuthority50646Mapping file id50646 NCBI fileEvidenceIEA
GenePtpn11Authority25622Mapping file id25622 NCBI fileEvidenceIEA
GenePtpn6Authority116689Mapping file id116689 NCBI fileEvidenceIEA
GenePtprz1Authority25613Mapping file id25613 NCBI fileEvidenceIEA
GeneRapgef1Authority63881Mapping file idENSRNOG00000014316 Ensembl fileEvidenceIEA
GeneRelaAuthority309165Mapping file idENSRNOG00000030888 Ensembl fileEvidenceIEA
GeneRipk2Authority362491Mapping file id362491 NCBI fileEvidenceIEA
GeneRps27aAuthority100912032Mapping file id100912032 NCBI fileEvidenceIEA
GeneRps6ka1Authority81771Mapping file id81771 NCBI fileEvidenceIEA
GeneRps6ka2Authority117269Mapping file id117269 NCBI fileEvidenceIEA
GeneRps6ka3Authority501560Mapping file id501560 NCBI fileEvidenceIEA
GeneRps6ka5Authority314384Mapping file idENSRNOG00000004362 Ensembl fileEvidenceIEA
GeneS100bAuthority25742Mapping file id25742 NCBI fileEvidenceIEA
GeneSdc1Authority25216Mapping file id25216 NCBI fileEvidenceIEA
GeneShc1Authority85385Mapping file id85385 NCBI fileEvidenceIEA
GeneSkp1Authority287280Mapping file id287280 NCBI fileEvidenceIEA
GeneSnap25Authority25012Mapping file id25012 NCBI fileEvidenceIEA
GeneSocs3Authority89829Mapping file id89829 NCBI fileEvidenceIEA
GeneSocs5Authority500616Mapping file id500616 NCBI fileEvidenceIEA
GeneSos1Authority313845Mapping file id313845 NCBI fileEvidenceIEA
GeneSos2Authority85384Mapping file idENSRNOG00000004826 Ensembl fileEvidenceIEA
GeneSqstm1Authority113894Mapping file id113894 NCBI fileEvidenceIEA
GeneStat1Authority25124Mapping file idENSRNOG00000014079 Ensembl fileEvidenceIEA
GeneStat2Authority288774Mapping file idENSRNOG00000031081 Ensembl fileEvidenceIEA
GeneStat3Authority25125Mapping file id25125 NCBI fileEvidenceIEA
GeneStat5aAuthority24918Mapping file id24918 NCBI fileEvidenceIEA
GeneStat5bAuthority25126Mapping file id25126 NCBI fileEvidenceIEA
GeneStat6Authority362896Mapping file idENSRNOG00000025023 Ensembl fileEvidenceIEA
GeneStx1aAuthority116470Mapping file id116470 NCBI fileEvidenceIEA
GeneStx3Authority81802Mapping file id81802 NCBI fileEvidenceIEA
GeneStx4Authority81803Mapping file id81803 NCBI fileEvidenceIEA
GeneStxbp2Authority81804Mapping file id81804 NCBI fileEvidenceIEA
GeneSykAuthority25155Mapping file id25155 NCBI fileEvidenceIEA
GeneTab1Authority315139Mapping file idENSRNOG00000017285 Ensembl fileEvidenceIEA
GeneTab2Authority308267Mapping file id308267 NCBI fileEvidenceIEA
GeneTab3Authority317546Mapping file id317546 NCBI fileEvidenceIEA
GeneTbk1Authority299827Mapping file id299827 NCBI fileEvidenceIEA
GeneTecAuthority84492Mapping file id84492 NCBI fileEvidenceIEA
GeneTifaAuthority310877Mapping file id310877 NCBI fileEvidenceIEA
GeneTnip2Authority305451Mapping file idENSRNOG00000013805 Ensembl fileEvidenceIEA
GeneTollipAuthority361677Mapping file id361677 NCBI fileEvidenceIEA
GeneTraf2Authority311786Mapping file idENSRNOG00000006238 Ensembl fileEvidenceIEA
GeneTraf6Authority311245Mapping file id311245 NCBI fileEvidenceIEA
GeneTslpAuthority688621Mapping file id688621 NCBI fileEvidenceIEA
GeneTxlnaAuthority682457Mapping file id682457 NCBI fileEvidenceIEA
GeneTyk2Authority100361294Mapping file id100361294 NCBI fileEvidenceIEA
GeneUba52Authority64156Mapping file id64156 NCBI fileEvidenceIEA
GeneUbbAuthority192255Mapping file id192255 NCBI fileEvidenceIEA
GeneUbcAuthority50522Mapping file id50522 NCBI fileEvidenceIEA
GeneUbe2nAuthority116725Mapping file id116725 NCBI fileEvidenceIEA
GeneUbe2v1Authority296390Mapping file idENSRNOG00000025580 Ensembl fileEvidenceIEA
GeneUbe2v1l1Authority679539Mapping file idENSRNOG00000067007 Ensembl fileEvidenceIEA
GeneUsp14Authority291796Mapping file idENSRNOG00000014981 Ensembl fileEvidenceIEA
GeneUsp18Authority312688Mapping file id312688 NCBI fileEvidenceIEA
GeneVamp2Authority24803Mapping file id24803 NCBI fileEvidenceIEA
GeneVamp7Authority85491Mapping file id85491 NCBI fileEvidenceIEA
GeneVav1Authority25156Mapping file idENSRNOG00000050430 Ensembl fileEvidenceIEA
GeneVrk3Authority361565Mapping file idENSRNOG00000026517 Ensembl fileEvidenceIEA
GeneYwhazAuthority25578Mapping file id25578 NCBI fileEvidenceIEA

Evidence codes on this page: IEA, as the mapping file writes them; a row carrying two was written twice by the file, once under each. The mapping file id says which file placed the gene: an NCBI Gene id from NCBI2Reactome_All_Levels.txt, an Ensembl gene id from Ensembl2Reactome_All_Levels.txt. The two files can disagree about a code, so a row's codes are the one file's view. Measured by this site's build over this release on 2026-09-09: the two files disagree on none of the 64,140 rat pairs both place.

  • Reactome mapping files, the rat rows for this pathway · Reactome release 97 · read · Reactome downloads"NCBI2Reactome_All_Levels.txt" and "Ensembl2Reactome_All_Levels.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.

03The hierarchy

Parents and children in this release's hierarchy

Reactome's hierarchy is a graph rather than a tree: a pathway can sit under more than one parent, and the gene counts are each pathway's own placements at every level under it, so a parent's count is not the sum of its children's.

  • Reactome, the rat pathway list and hierarchy relationship file · Reactome release 97 · read · Reactome downloads"ReactomePathways.txt" and "ReactomePathwaysRelation.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.