Pathway Human Homo sapiens
Transcriptional Regulation by TP53
R-HSA-3700989 in Reactome release 97: under Generic Transcription Pathway, with 361 genes placed in it by the mapping files and 5 child pathways in the hierarchy.
The same number in the other species
Reactome writes the mouse and rat events it infers from a human pathway under the human number with the species token. A door opens only where that species' own list in this release holds the id: R-MMU-3700989 (mouse), R-RNO-3700989 (rat). Whether the event was inferred from this one is what the record says.
01The record
Reactome's own record of this pathway
What this tells you
The pathway list, the hierarchy and the genes on this page are read from the files Reactome publishes for Reactome release 97, built into this site on 2026-09-09: the pathway list, the hierarchy relationship file and the two gene mapping files. The record card is the one live read, Reactome's own record of this pathway.
Reactome's download page describes the mapping files: Mapping files link the source database identifier to the lowest level pathway diagram or subset of the pathway, all levels of the pathway hierarchy or database identifier to all reactions.
[R13] The gene list here is the all-levels mapping of NCBI Gene ids, filled from the all-levels mapping of Ensembl ids where the NCBI file has no row for a gene; each row names which file it came from by the shape of its source id. Each row carries the evidence codes the file writes for it, as written and unranked, and both where the file writes both; no page of Reactome's documentation the survey read defines the codes, so this page does not expand them. A gene id the identity files do not name is kept as the source's own id with no door rather than turned into a symbol.
On citing what a search finds, Reactome says: It should be remembered that while we strive to contain the most current and accurate data, Reactome should not be used in citations where other primary sources of information are available.
[R12] The record card prints the literature Reactome attaches to a curated pathway for that reason. The data are public domain: All data in the Reactome database and files derived from that data are licensed under the Creative Commons Public Domain Dedication (CC0). User may copy, modify, and distribute these data, even for commercial purposes, without asking for permission. Attribution is encouraged but not required.
[R10] The pathway illustrations are licensed apart, under CC BY 4.0, and none is shown here.
A gene on this list is one Reactome places in this pathway in this release, and that is all the row says: it does not say the gene is expressed in a tissue or associated with a disease, which are the other two explorers' questions, read from other sources. Reactome's papers of record are [R01] [R02].
- [R01] Ragueneau E, Gong C, Sinquin P, Sevilla C, Beavers D, Grentner A, et al. (2026). The Reactome Knowledgebase 2026. Nucleic Acids Research 54:D673-D681. PMID 41251150, doi 10.1093/nar/gkaf1223.
- [R02] Milacic M, Beavers D, Conley P, Gong C, Gillespie M, Griss J, et al. (2024). The Reactome Pathway Knowledgebase 2024. Nucleic Acids Research 52:D672-D678. PMID 37941124, doi 10.1093/nar/gkad1025.
- [R10] Reactome, reactome.org. License Agreement. https://reactome.org/license, read 2026-09-09.
- [R12] Reactome, reactome.org. Citing us. https://reactome.org/cite, read 2026-09-09.
- [R13] Reactome, reactome.org. Download. https://reactome.org/download-data, read 2026-09-09.
02The genes
Genes Reactome places in this human pathway
The mapping files place 361 genes in this human pathway; showing 101 to 200, in pages of 100, sorted by symbol for reading. The order carries no ranking.
| Gene | Authority id | Mapping file id | Evidence codes |
|---|---|---|---|
| GeneCTDP1 | AuthorityHGNC:2498 | Mapping file id9150 NCBI file | EvidenceTAS |
| GeneCYCS | AuthorityHGNC:19986 | Mapping file id54205 NCBI file | EvidenceTAS |
| GeneDAXX | AuthorityHGNC:2681 | Mapping file id1616 NCBI file | EvidenceTAS |
| GeneDDB2 | AuthorityHGNC:2718 | Mapping file id1643 NCBI file | EvidenceTAS |
| GeneDDIT4 | AuthorityHGNC:24944 | Mapping file id54541 NCBI file | EvidenceTAS |
| GeneDNA2 | AuthorityHGNC:2939 | Mapping file id1763 NCBI file | EvidenceTAS |
| GeneDYRK2 | AuthorityHGNC:3093 | Mapping file id8445 NCBI file | EvidenceTAS |
| GeneE2F1 | AuthorityHGNC:3113 | Mapping file id1869 NCBI file | EvidenceTAS |
| GeneE2F4 | AuthorityHGNC:3118 | Mapping file id1874 NCBI file | EvidenceTAS |
| GeneE2F7 | AuthorityHGNC:23820 | Mapping file id144455 NCBI file | EvidenceTAS |
| GeneE2F8 | AuthorityHGNC:24727 | Mapping file id79733 NCBI file | EvidenceTAS |
| GeneEHMT1 | AuthorityHGNC:24650 | Mapping file id79813 NCBI file | EvidenceTAS |
| GeneEHMT2 | AuthorityHGNC:14129 | Mapping file id10919 NCBI file | EvidenceTAS |
| GeneELL | AuthorityHGNC:23114 | Mapping file id8178 NCBI file | EvidenceTAS |
| GeneELOA | AuthorityHGNC:11620 | Mapping file id6924 NCBI file | EvidenceTAS |
| GeneELOA2 | AuthorityHGNC:30771 | Mapping file id51224 NCBI file | EvidenceTAS |
| GeneELOB | AuthorityHGNC:11619 | Mapping file id6923 NCBI file | EvidenceTAS |
| GeneELOC | AuthorityHGNC:11617 | Mapping file id6921 NCBI file | EvidenceTAS |
| GeneEP300 | AuthorityHGNC:3373 | Mapping file id2033 NCBI file | EvidenceTAS |
| GeneERCC2 | AuthorityHGNC:3434 | Mapping file id2068 NCBI file | EvidenceTAS |
| GeneERCC3 | AuthorityHGNC:3435 | Mapping file id2071 NCBI file | EvidenceTAS |
| GeneEXO1 | AuthorityHGNC:3511 | Mapping file id9156 NCBI file | EvidenceTAS |
| GeneFANCC | AuthorityHGNC:3584 | Mapping file id2176 NCBI file | EvidenceTAS |
| GeneFANCD2 | AuthorityHGNC:3585 | Mapping file id2177 NCBI file | EvidenceTAS |
| GeneFANCI | AuthorityHGNC:25568 | Mapping file id55215 NCBI file | EvidenceTAS |
| GeneFAS | AuthorityHGNC:11920 | Mapping file id355 NCBI file | EvidenceTAS |
| GeneFOS | AuthorityHGNC:3796 | Mapping file id2353 NCBI file | EvidenceTAS |
| GeneG6PD | AuthorityHGNC:4057 | Mapping file id2539 NCBI file | EvidenceTAS |
| GeneGADD45A | AuthorityHGNC:4095 | Mapping file id1647 NCBI file | EvidenceTAS |
| GeneGATAD2A | AuthorityHGNC:29989 | Mapping file id54815 NCBI file | EvidenceTAS |
| GeneGATAD2B | AuthorityHGNC:30778 | Mapping file id57459 NCBI file | EvidenceTAS |
| GeneGLS | AuthorityHGNC:4331 | Mapping file id2744 NCBI file | EvidenceTAS |
| GeneGLS2 | AuthorityHGNC:29570 | Mapping file id27165 NCBI file | EvidenceTAS |
| GeneGPI | AuthorityHGNC:4458 | Mapping file id2821 NCBI file | EvidenceTAS |
| GeneGPX2 | AuthorityHGNC:4554 | Mapping file id2877 NCBI file | EvidenceTAS |
| GeneGSR | AuthorityHGNC:4623 | Mapping file id2936 NCBI file | EvidenceTAS |
| GeneGTF2F1 | AuthorityHGNC:4652 | Mapping file id2962 NCBI file | EvidenceTAS |
| GeneGTF2F2 | AuthorityHGNC:4653 | Mapping file id2963 NCBI file | EvidenceTAS |
| GeneGTF2H1 | AuthorityHGNC:4655 | Mapping file id2965 NCBI file | EvidenceTAS |
| GeneGTF2H2 | AuthorityHGNC:4656 | Mapping file id2966 NCBI file | EvidenceTAS |
| GeneGTF2H3 | AuthorityHGNC:4657 | Mapping file id2967 NCBI file | EvidenceTAS |
| GeneGTF2H4 | AuthorityHGNC:4658 | Mapping file id2968 NCBI file | EvidenceTAS |
| GeneGTF2H5 | AuthorityHGNC:21157 | Mapping file id404672 NCBI file | EvidenceTAS |
| GeneHDAC1 | AuthorityHGNC:4852 | Mapping file id3065 NCBI file | EvidenceTAS |
| GeneHDAC2 | AuthorityHGNC:4853 | Mapping file id3066 NCBI file | EvidenceTAS |
| GeneHIGD1C | AuthorityHGNC:28044 | Mapping file id613227 NCBI file | EvidenceTAS |
| GeneHIPK1 | AuthorityHGNC:19006 | Mapping file id204851 NCBI file | EvidenceTAS |
| GeneHIPK2 | AuthorityHGNC:14402 | Mapping file id28996 NCBI file | EvidenceTAS |
| GeneHUS1 | AuthorityHGNC:5309 | Mapping file id3364 NCBI file | EvidenceTAS |
| GeneIGFBP3 | AuthorityHGNC:5472 | Mapping file id3486 NCBI file | EvidenceTAS |
| GeneING2 | AuthorityHGNC:6063 | Mapping file id3622 NCBI file | EvidenceTAS |
| GeneING5 | AuthorityHGNC:19421 | Mapping file id84289 NCBI file | EvidenceTAS |
| GeneJMY | AuthorityHGNC:28916 | Mapping file id133746 NCBI file | EvidenceTAS |
| GeneJUN | AuthorityHGNC:6204 | Mapping file id3725 NCBI file | EvidenceTAS |
| GeneKAT5 | AuthorityHGNC:5275 | Mapping file id10524 NCBI file | EvidenceTAS |
| GeneKAT6A | AuthorityHGNC:13013 | Mapping file id7994 NCBI file | EvidenceTAS |
| GeneKMT5A | AuthorityHGNC:29489 | Mapping file id387893 NCBI file | EvidenceTAS |
| GeneL3MBTL1 | AuthorityHGNC:15905 | Mapping file id26013 NCBI file | EvidenceTAS |
| GeneLAMTOR1 | AuthorityHGNC:26068 | Mapping file id55004 NCBI file | EvidenceTAS |
| GeneLAMTOR2 | AuthorityHGNC:29796 | Mapping file id28956 NCBI file | EvidenceTAS |
| GeneLAMTOR3 | AuthorityHGNC:15606 | Mapping file id8649 NCBI file | EvidenceTAS |
| GeneLAMTOR4 | AuthorityHGNC:33772 | Mapping file id389541 NCBI file | EvidenceTAS |
| GeneLAMTOR5 | AuthorityHGNC:17955 | Mapping file id10542 NCBI file | EvidenceTAS |
| GeneMAP2K6 | AuthorityHGNC:6846 | Mapping file id5608 NCBI file | EvidenceTAS |
| GeneMAPK11 | AuthorityHGNC:6873 | Mapping file id5600 NCBI file | EvidenceTAS |
| GeneMAPK14 | AuthorityHGNC:6876 | Mapping file id1432 NCBI file | EvidenceTAS |
| GeneMAPKAP1 | AuthorityHGNC:18752 | Mapping file id79109 NCBI file | EvidenceTAS |
| GeneMAPKAPK5 | AuthorityHGNC:6889 | Mapping file id8550 NCBI file | EvidenceTAS |
| GeneMBD3 | AuthorityHGNC:6918 | Mapping file id53615 NCBI file | EvidenceTAS |
| GeneMDC1 | AuthorityHGNC:21163 | Mapping file id9656 NCBI file | EvidenceTAS |
| GeneMDM2 | AuthorityHGNC:6973 | Mapping file id4193 NCBI file | EvidenceTAS |
| GeneMDM4 | AuthorityHGNC:6974 | Mapping file id4194 NCBI file | EvidenceTAS |
| GeneMEAF6 | AuthorityHGNC:25674 | Mapping file id64769 NCBI file | EvidenceTAS |
| GeneMLH1 | AuthorityHGNC:7127 | Mapping file id4292 NCBI file | EvidenceTAS |
| GeneMLST8 | AuthorityHGNC:24825 | Mapping file id64223 NCBI file | EvidenceTAS |
| GeneMNAT1 | AuthorityHGNC:7181 | Mapping file id4331 NCBI file | EvidenceTAS |
| GeneMOV10 | AuthorityHGNC:7200 | Mapping file id4343 NCBI file | EvidenceTAS |
| GeneMRE11 | AuthorityHGNC:7230 | Mapping file id4361 NCBI file | EvidenceTAS |
| GeneMSH2 | AuthorityHGNC:7325 | Mapping file id4436 NCBI file | EvidenceTAS |
| GeneMT-CO1 | AuthorityHGNC:7419 | Mapping file id4512 NCBI file | EvidenceTAS |
| GeneMT-CO2 | AuthorityHGNC:7421 | Mapping file id4513 NCBI file | EvidenceTAS |
| GeneMT-CO3 | AuthorityHGNC:7422 | Mapping file id4514 NCBI file | EvidenceTAS |
| GeneMTA2 | AuthorityHGNC:7411 | Mapping file id9219 NCBI file | EvidenceTAS |
| GeneMTOR | AuthorityHGNC:3942 | Mapping file id2475 NCBI file | EvidenceTAS |
| GeneNBN | AuthorityHGNC:7652 | Mapping file id4683 NCBI file | EvidenceTAS |
| GeneNDRG1 | AuthorityHGNC:7679 | Mapping file id10397 NCBI file | EvidenceTAS |
| GeneNELFA | AuthorityHGNC:12768 | Mapping file id7469 NCBI file | EvidenceTAS |
| GeneNELFB | AuthorityHGNC:24324 | Mapping file id25920 NCBI file | EvidenceTAS |
| GeneNELFCD | AuthorityHGNC:15934 | Mapping file id51497 NCBI file | EvidenceTAS |
| GeneNELFE | AuthorityHGNC:13974 | Mapping file id7936 NCBI file | EvidenceTAS |
| GeneNLRC4 | AuthorityHGNC:16412 | Mapping file id58484 NCBI file | EvidenceTAS |
| GeneNOC2L | AuthorityHGNC:24517 | Mapping file id26155 NCBI file | EvidenceTAS |
| GeneNPM1 | AuthorityHGNC:7910 | Mapping file id4869 NCBI file | EvidenceTAS |
| GeneNUAK1 | AuthorityHGNC:14311 | Mapping file id9891 NCBI file | EvidenceTAS |
| GenePCBP4 | AuthorityHGNC:8652 | Mapping file id57060 NCBI file | EvidenceTAS |
| GenePCNA | AuthorityHGNC:8729 | Mapping file id5111 NCBI file | EvidenceTAS |
| GenePDPK1 | AuthorityHGNC:8816 | Mapping file id5170 NCBI file | EvidenceTAS |
| GenePERP | AuthorityHGNC:17637 | Mapping file id64065 NCBI file | EvidenceTAS |
| GenePHF20 | AuthorityHGNC:16098 | Mapping file id51230 NCBI file | EvidenceTAS |
| GenePIDD1 | AuthorityHGNC:16491 | Mapping file id55367 NCBI file | EvidenceTAS |
Evidence codes on this page: TAS, as the mapping file writes them; a row carrying two was written twice by the file, once under each. The mapping file id says which file placed the gene: an NCBI Gene id from NCBI2Reactome_All_Levels.txt, an Ensembl gene id from Ensembl2Reactome_All_Levels.txt. The two files can disagree about a code, so a row's codes are the one file's view. Measured by this site's build over this release on 2026-09-09: of the 138,908 human pathway-gene pairs both files place, 207 (0.149 per cent, over 47 genes) carry TAS in the Ensembl file where the NCBI rows carry IEA alone.
- Reactome mapping files, the human rows for this pathway · Reactome release 97 · read · Reactome downloads"NCBI2Reactome_All_Levels.txt" and "Ensembl2Reactome_All_Levels.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.
03The hierarchy
Parents and children in this release's hierarchy
Children
- Regulation of TP53 ActivityR-HSA-5633007161 genes
- TP53 Regulates Metabolic GenesR-HSA-562889784 genes
- TP53 Regulates Transcription of Cell Cycle GenesR-HSA-679131249 genes
- TP53 Regulates Transcription of Cell Death GenesR-HSA-563300844 genes
- TP53 Regulates Transcription of DNA Repair GenesR-HSA-679664862 genes
Reactome's hierarchy is a graph rather than a tree: a pathway can sit under more than one parent, and the gene counts are each pathway's own placements at every level under it, so a parent's count is not the sum of its children's.
- Reactome, the human pathway list and hierarchy relationship file · Reactome release 97 · read · Reactome downloads"ReactomePathways.txt" and "ReactomePathwaysRelation.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.