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Pathway Human Homo sapiens

Interferon gamma signaling

R-HSA-877300 in Reactome release 97: under Interferon Signaling, with 98 genes placed in it by the mapping files and 2 child pathways in the hierarchy.

The same number in the other species

Reactome writes the mouse and rat events it infers from a human pathway under the human number with the species token. A door opens only where that species' own list in this release holds the id: R-MMU-877300 (mouse), R-RNO-877300 (rat). Whether the event was inferred from this one is what the record says.

01The record

Reactome's own record of this pathway

What this tells you

The pathway list, the hierarchy and the genes on this page are read from the files Reactome publishes for Reactome release 97, built into this site on 2026-09-09: the pathway list, the hierarchy relationship file and the two gene mapping files. The record card is the one live read, Reactome's own record of this pathway.

Reactome's download page describes the mapping files: Mapping files link the source database identifier to the lowest level pathway diagram or subset of the pathway, all levels of the pathway hierarchy or database identifier to all reactions. [R13] The gene list here is the all-levels mapping of NCBI Gene ids, filled from the all-levels mapping of Ensembl ids where the NCBI file has no row for a gene; each row names which file it came from by the shape of its source id. Each row carries the evidence codes the file writes for it, as written and unranked, and both where the file writes both; no page of Reactome's documentation the survey read defines the codes, so this page does not expand them. A gene id the identity files do not name is kept as the source's own id with no door rather than turned into a symbol.

On citing what a search finds, Reactome says: It should be remembered that while we strive to contain the most current and accurate data, Reactome should not be used in citations where other primary sources of information are available. [R12] The record card prints the literature Reactome attaches to a curated pathway for that reason. The data are public domain: All data in the Reactome database and files derived from that data are licensed under the Creative Commons Public Domain Dedication (CC0). User may copy, modify, and distribute these data, even for commercial purposes, without asking for permission. Attribution is encouraged but not required. [R10] The pathway illustrations are licensed apart, under CC BY 4.0, and none is shown here.

A gene on this list is one Reactome places in this pathway in this release, and that is all the row says: it does not say the gene is expressed in a tissue or associated with a disease, which are the other two explorers' questions, read from other sources. Reactome's papers of record are [R01] [R02].

  1. [R01] Ragueneau E, Gong C, Sinquin P, Sevilla C, Beavers D, Grentner A, et al. (2026). The Reactome Knowledgebase 2026. Nucleic Acids Research 54:D673-D681. PMID 41251150, doi 10.1093/nar/gkaf1223.
  2. [R02] Milacic M, Beavers D, Conley P, Gong C, Gillespie M, Griss J, et al. (2024). The Reactome Pathway Knowledgebase 2024. Nucleic Acids Research 52:D672-D678. PMID 37941124, doi 10.1093/nar/gkad1025.
  3. [R10] Reactome, reactome.org. License Agreement. https://reactome.org/license, read 2026-09-09.
  4. [R12] Reactome, reactome.org. Citing us. https://reactome.org/cite, read 2026-09-09.
  5. [R13] Reactome, reactome.org. Download. https://reactome.org/download-data, read 2026-09-09.
Reading this pathway's record from Reactome (the pathway record).Still reading. A first read of a pathway can take a while; this page waits up to 35 seconds for it, and its scripts then bring in the panel, or a line saying what did not arrive.

02The genes

Genes Reactome places in this human pathway

The mapping files place 98 genes in this human pathway; showing 1 to 98, in pages of 100, sorted by symbol for reading. The order carries no ranking.

Genes Reactome places in this human pathway, page 1 of 1
GeneB2MAuthorityHGNC:914Mapping file id567 NCBI fileEvidenceTAS
GeneCAMK2AAuthorityHGNC:1460Mapping file id815 NCBI fileEvidenceTAS
GeneCAMK2BAuthorityHGNC:1461Mapping file id816 NCBI fileEvidenceTAS
GeneCAMK2DAuthorityHGNC:1462Mapping file id817 NCBI fileEvidenceTAS
GeneCAMK2GAuthorityHGNC:1463Mapping file id818 NCBI fileEvidenceTAS
GeneCD44AuthorityHGNC:1681Mapping file id960 NCBI fileEvidenceTAS
GeneCIITAAuthorityHGNC:7067Mapping file id4261 NCBI fileEvidenceTAS
GeneFCGR1AAuthorityHGNC:3613Mapping file id2209 NCBI fileEvidenceTAS
GeneFCGR1BPAuthorityHGNC:3614Mapping file idENSG00000198019 Ensembl fileEvidenceTAS
GeneGBP1AuthorityHGNC:4182Mapping file id2633 NCBI fileEvidenceTAS
GeneGBP2AuthorityHGNC:4183Mapping file id2634 NCBI fileEvidenceTAS
GeneGBP3AuthorityHGNC:4184Mapping file id2635 NCBI fileEvidenceTAS
GeneGBP4AuthorityHGNC:20480Mapping file id115361 NCBI fileEvidenceTAS
GeneGBP5AuthorityHGNC:19895Mapping file id115362 NCBI fileEvidenceTAS
GeneGBP6AuthorityHGNC:25395Mapping file id163351 NCBI fileEvidenceTAS
GeneGBP7AuthorityHGNC:29606Mapping file id388646 NCBI fileEvidenceTAS
GeneHLA-AAuthorityHGNC:4931Mapping file id3105 NCBI fileEvidenceTAS
GeneHLA-BAuthorityHGNC:4932Mapping file id3106 NCBI fileEvidenceTAS
GeneHLA-CAuthorityHGNC:4933Mapping file id3107 NCBI fileEvidenceTAS
GeneHLA-DPA1AuthorityHGNC:4938Mapping file id3113 NCBI fileEvidenceTAS
GeneHLA-DPB1AuthorityHGNC:4940Mapping file id3115 NCBI fileEvidenceTAS
GeneHLA-DQA1AuthorityHGNC:4942Mapping file id3117 NCBI fileEvidenceTAS
GeneHLA-DQA2AuthorityHGNC:4943Mapping file id3118 NCBI fileEvidenceTAS
GeneHLA-DQB1AuthorityHGNC:4944Mapping file id3119 NCBI fileEvidenceTAS
GeneHLA-DQB2AuthorityHGNC:4945Mapping file id3120 NCBI fileEvidenceTAS
GeneHLA-DRAAuthorityHGNC:4947Mapping file id3122 NCBI fileEvidenceTAS
GeneHLA-DRB1AuthorityHGNC:4948Mapping file id3123 NCBI fileEvidenceTAS
GeneHLA-DRB3AuthorityHGNC:4951Mapping file id3125 NCBI fileEvidenceTAS
GeneHLA-DRB4AuthorityHGNC:4952Mapping file id3126 NCBI fileEvidenceTAS
GeneHLA-DRB5AuthorityHGNC:4953Mapping file id3127 NCBI fileEvidenceTAS
GeneHLA-EAuthorityHGNC:4962Mapping file id3133 NCBI fileEvidenceTAS
GeneHLA-FAuthorityHGNC:4963Mapping file id3134 NCBI fileEvidenceTAS
GeneHLA-GAuthorityHGNC:4964Mapping file id3135 NCBI fileEvidenceTAS
GeneHLA-HAuthorityHGNC:4965Mapping file idENSG00000206341 Ensembl fileEvidenceTAS
GeneICAM1AuthorityHGNC:5344Mapping file id3383 NCBI fileEvidenceTAS
GeneIFI30AuthorityHGNC:5398Mapping file id10437 NCBI fileEvidenceTAS
GeneIFNGAuthorityHGNC:5438Mapping file id3458 NCBI fileEvidenceIEA, TAS
GeneIFNGR1AuthorityHGNC:5439Mapping file id3459 NCBI fileEvidenceIEA, TAS
GeneIFNGR2AuthorityHGNC:5440Mapping file id3460 NCBI fileEvidenceIEA, TAS
GeneIRF1AuthorityHGNC:6116Mapping file id3659 NCBI fileEvidenceTAS
GeneIRF2AuthorityHGNC:6117Mapping file id3660 NCBI fileEvidenceTAS
GeneIRF3AuthorityHGNC:6118Mapping file id3661 NCBI fileEvidenceTAS
GeneIRF4AuthorityHGNC:6119Mapping file id3662 NCBI fileEvidenceTAS
GeneIRF5AuthorityHGNC:6120Mapping file id3663 NCBI fileEvidenceTAS
GeneIRF6AuthorityHGNC:6121Mapping file id3664 NCBI fileEvidenceTAS
GeneIRF7AuthorityHGNC:6122Mapping file id3665 NCBI fileEvidenceTAS
GeneIRF8AuthorityHGNC:5358Mapping file id3394 NCBI fileEvidenceTAS
GeneIRF9AuthorityHGNC:6131Mapping file id10379 NCBI fileEvidenceTAS
GeneJAK1AuthorityHGNC:6190Mapping file id3716 NCBI fileEvidenceIEA, TAS
GeneJAK2AuthorityHGNC:6192Mapping file id3717 NCBI fileEvidenceIEA, TAS
GeneMAPK1AuthorityHGNC:6871Mapping file id5594 NCBI fileEvidenceTAS
GeneMAPK3AuthorityHGNC:6877Mapping file id5595 NCBI fileEvidenceTAS
GeneMID1AuthorityHGNC:7095Mapping file id4281 NCBI fileEvidenceTAS
GeneMT2AAuthorityHGNC:7406Mapping file id4502 NCBI fileEvidenceTAS
GeneNCAM1AuthorityHGNC:7656Mapping file id4684 NCBI fileEvidenceTAS
GeneOAS1AuthorityHGNC:8086Mapping file id4938 NCBI fileEvidenceTAS
GeneOAS2AuthorityHGNC:8087Mapping file id4939 NCBI fileEvidenceTAS
GeneOAS3AuthorityHGNC:8088Mapping file id4940 NCBI fileEvidenceTAS
GeneOASLAuthorityHGNC:8090Mapping file id8638 NCBI fileEvidenceTAS
GenePIAS1AuthorityHGNC:2752Mapping file id8554 NCBI fileEvidenceTAS
GenePMLAuthorityHGNC:9113Mapping file id5371 NCBI fileEvidenceTAS
GenePRKCDAuthorityHGNC:9399Mapping file id5580 NCBI fileEvidenceTAS
GenePTAFRAuthorityHGNC:9582Mapping file id5724 NCBI fileEvidenceTAS
GenePTPN1AuthorityHGNC:9642Mapping file id5770 NCBI fileEvidenceIEA
GenePTPN11AuthorityHGNC:9644Mapping file id5781 NCBI fileEvidenceIEA
GenePTPN2AuthorityHGNC:9650Mapping file id5771 NCBI fileEvidenceTAS
GenePTPN6AuthorityHGNC:9658Mapping file id5777 NCBI fileEvidenceIEA, TAS
GeneRAF1AuthorityHGNC:9829Mapping file id5894 NCBI fileEvidenceTAS
GeneSMAD7AuthorityHGNC:6773Mapping file id4092 NCBI fileEvidenceTAS
GeneSOCS1AuthorityHGNC:19383Mapping file id8651 NCBI fileEvidenceTAS
GeneSOCS3AuthorityHGNC:19391Mapping file id9021 NCBI fileEvidenceTAS
GeneSP100AuthorityHGNC:11206Mapping file id6672 NCBI fileEvidenceTAS
GeneSTAT1AuthorityHGNC:11362Mapping file id6772 NCBI fileEvidenceTAS
GeneSUMO1AuthorityHGNC:12502Mapping file id7341 NCBI fileEvidenceTAS
GeneTRIM10AuthorityHGNC:10072Mapping file id10107 NCBI fileEvidenceTAS
GeneTRIM14AuthorityHGNC:16283Mapping file id9830 NCBI fileEvidenceTAS
GeneTRIM17AuthorityHGNC:13430Mapping file id51127 NCBI fileEvidenceTAS
GeneTRIM2AuthorityHGNC:15974Mapping file id23321 NCBI fileEvidenceTAS
GeneTRIM21AuthorityHGNC:11312Mapping file id6737 NCBI fileEvidenceTAS
GeneTRIM22AuthorityHGNC:16379Mapping file id10346 NCBI fileEvidenceTAS
GeneTRIM25AuthorityHGNC:12932Mapping file id7706 NCBI fileEvidenceTAS
GeneTRIM26AuthorityHGNC:12962Mapping file id7726 NCBI fileEvidenceTAS
GeneTRIM29AuthorityHGNC:17274Mapping file id23650 NCBI fileEvidenceTAS
GeneTRIM3AuthorityHGNC:10064Mapping file id10612 NCBI fileEvidenceTAS
GeneTRIM31AuthorityHGNC:16289Mapping file id11074 NCBI fileEvidenceTAS
GeneTRIM34AuthorityHGNC:10063Mapping file id53840 NCBI fileEvidenceTAS
GeneTRIM35AuthorityHGNC:16285Mapping file id23087 NCBI fileEvidenceTAS
GeneTRIM38AuthorityHGNC:10059Mapping file id10475 NCBI fileEvidenceTAS
GeneTRIM45AuthorityHGNC:19018Mapping file id80263 NCBI fileEvidenceTAS
GeneTRIM46AuthorityHGNC:19019Mapping file id80128 NCBI fileEvidenceTAS
GeneTRIM48AuthorityHGNC:19021Mapping file id79097 NCBI fileEvidenceTAS
GeneTRIM5AuthorityHGNC:16276Mapping file id85363 NCBI fileEvidenceTAS
GeneTRIM6AuthorityHGNC:16277Mapping file id117854 NCBI fileEvidenceTAS
GeneTRIM62AuthorityHGNC:25574Mapping file id55223 NCBI fileEvidenceTAS
GeneTRIM68AuthorityHGNC:21161Mapping file id55128 NCBI fileEvidenceTAS
GeneTRIM8AuthorityHGNC:15579Mapping file id81603 NCBI fileEvidenceTAS
GeneVCAM1AuthorityHGNC:12663Mapping file id7412 NCBI fileEvidenceTAS
GeneYBX1AuthorityHGNC:8014Mapping file id4904 NCBI fileEvidenceTAS

Evidence codes on this page: IEA, TAS, as the mapping file writes them; a row carrying two was written twice by the file, once under each. The mapping file id says which file placed the gene: an NCBI Gene id from NCBI2Reactome_All_Levels.txt, an Ensembl gene id from Ensembl2Reactome_All_Levels.txt. The two files can disagree about a code, so a row's codes are the one file's view. Measured by this site's build over this release on 2026-09-09: of the 138,908 human pathway-gene pairs both files place, 207 (0.149 per cent, over 47 genes) carry TAS in the Ensembl file where the NCBI rows carry IEA alone.

  • Reactome mapping files, the human rows for this pathway · Reactome release 97 · read · Reactome downloads"NCBI2Reactome_All_Levels.txt" and "Ensembl2Reactome_All_Levels.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.

03The hierarchy

Parents and children in this release's hierarchy

Reactome's hierarchy is a graph rather than a tree: a pathway can sit under more than one parent, and the gene counts are each pathway's own placements at every level under it, so a parent's count is not the sum of its children's.

  • Reactome, the human pathway list and hierarchy relationship file · Reactome release 97 · read · Reactome downloads"ReactomePathways.txt" and "ReactomePathwaysRelation.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.