Pathway Human Homo sapiens
Class I MHC mediated antigen processing & presentation
R-HSA-983169 in Reactome release 97: under Adaptive Immune System, with 376 genes placed in it by the mapping files and 4 child pathways in the hierarchy.
The same number in the other species
Reactome writes the mouse and rat events it infers from a human pathway under the human number with the species token. A door opens only where that species' own list in this release holds the id: R-MMU-983169 (mouse), R-RNO-983169 (rat). Whether the event was inferred from this one is what the record says.
01The record
Reactome's own record of this pathway
What this tells you
The pathway list, the hierarchy and the genes on this page are read from the files Reactome publishes for Reactome release 97, built into this site on 2026-09-09: the pathway list, the hierarchy relationship file and the two gene mapping files. The record card is the one live read, Reactome's own record of this pathway.
Reactome's download page describes the mapping files: Mapping files link the source database identifier to the lowest level pathway diagram or subset of the pathway, all levels of the pathway hierarchy or database identifier to all reactions.
[R13] The gene list here is the all-levels mapping of NCBI Gene ids, filled from the all-levels mapping of Ensembl ids where the NCBI file has no row for a gene; each row names which file it came from by the shape of its source id. Each row carries the evidence codes the file writes for it, as written and unranked, and both where the file writes both; no page of Reactome's documentation the survey read defines the codes, so this page does not expand them. A gene id the identity files do not name is kept as the source's own id with no door rather than turned into a symbol.
On citing what a search finds, Reactome says: It should be remembered that while we strive to contain the most current and accurate data, Reactome should not be used in citations where other primary sources of information are available.
[R12] The record card prints the literature Reactome attaches to a curated pathway for that reason. The data are public domain: All data in the Reactome database and files derived from that data are licensed under the Creative Commons Public Domain Dedication (CC0). User may copy, modify, and distribute these data, even for commercial purposes, without asking for permission. Attribution is encouraged but not required.
[R10] The pathway illustrations are licensed apart, under CC BY 4.0, and none is shown here.
A gene on this list is one Reactome places in this pathway in this release, and that is all the row says: it does not say the gene is expressed in a tissue or associated with a disease, which are the other two explorers' questions, read from other sources. Reactome's papers of record are [R01] [R02].
- [R01] Ragueneau E, Gong C, Sinquin P, Sevilla C, Beavers D, Grentner A, et al. (2026). The Reactome Knowledgebase 2026. Nucleic Acids Research 54:D673-D681. PMID 41251150, doi 10.1093/nar/gkaf1223.
- [R02] Milacic M, Beavers D, Conley P, Gong C, Gillespie M, Griss J, et al. (2024). The Reactome Pathway Knowledgebase 2024. Nucleic Acids Research 52:D672-D678. PMID 37941124, doi 10.1093/nar/gkad1025.
- [R10] Reactome, reactome.org. License Agreement. https://reactome.org/license, read 2026-09-09.
- [R12] Reactome, reactome.org. Citing us. https://reactome.org/cite, read 2026-09-09.
- [R13] Reactome, reactome.org. Download. https://reactome.org/download-data, read 2026-09-09.
02The genes
Genes Reactome places in this human pathway
The mapping files place 376 genes in this human pathway; showing 101 to 200, in pages of 100, sorted by symbol for reading. The order carries no ranking.
| Gene | Authority id | Mapping file id | Evidence codes |
|---|---|---|---|
| GeneFBXO44 | AuthorityHGNC:24847 | Mapping file id93611 NCBI file | EvidenceTAS |
| GeneFBXO6 | AuthorityHGNC:13585 | Mapping file id26270 NCBI file | EvidenceTAS |
| GeneFBXO7 | AuthorityHGNC:13586 | Mapping file id25793 NCBI file | EvidenceTAS |
| GeneFBXO9 | AuthorityHGNC:13588 | Mapping file id26268 NCBI file | EvidenceTAS |
| GeneFBXW10 | AuthorityHGNC:1211 | Mapping file id10517 NCBI file | EvidenceTAS |
| GeneFBXW11 | AuthorityHGNC:13607 | Mapping file id23291 NCBI file | EvidenceTAS |
| GeneFBXW12 | AuthorityHGNC:20729 | Mapping file id285231 NCBI file | EvidenceTAS |
| GeneFBXW2 | AuthorityHGNC:13608 | Mapping file id26190 NCBI file | EvidenceTAS |
| GeneFBXW4 | AuthorityHGNC:10847 | Mapping file id6468 NCBI file | EvidenceTAS |
| GeneFBXW5 | AuthorityHGNC:13613 | Mapping file id54461 NCBI file | EvidenceTAS |
| GeneFBXW7 | AuthorityHGNC:16712 | Mapping file id55294 NCBI file | EvidenceTAS |
| GeneFBXW8 | AuthorityHGNC:13597 | Mapping file id26259 NCBI file | EvidenceTAS |
| GeneFBXW9 | AuthorityHGNC:28136 | Mapping file id84261 NCBI file | EvidenceTAS |
| GeneFCGR1A | AuthorityHGNC:3613 | Mapping file id2209 NCBI file | EvidenceIEA, TAS |
| GeneFCGR1BP | AuthorityHGNC:3614 | Mapping file idENSG00000198019 Ensembl file | EvidenceIEA, TAS |
| GeneFGA | AuthorityHGNC:3661 | Mapping file id2243 NCBI file | EvidenceTAS |
| GeneFGB | AuthorityHGNC:3662 | Mapping file id2244 NCBI file | EvidenceTAS |
| GeneFGG | AuthorityHGNC:3694 | Mapping file id2266 NCBI file | EvidenceTAS |
| GeneFZR1 | AuthorityHGNC:24824 | Mapping file id51343 NCBI file | EvidenceTAS |
| GeneGAN | AuthorityHGNC:4137 | Mapping file id8139 NCBI file | EvidenceTAS |
| GeneGLMN | AuthorityHGNC:14373 | Mapping file id11146 NCBI file | EvidenceTAS |
| GeneGPR75-ASB3 | AuthorityHGNC:40043 | Mapping file id100302652 NCBI file | EvidenceTAS |
| GeneHACE1 | AuthorityHGNC:21033 | Mapping file id57531 NCBI file | EvidenceTAS |
| GeneHECTD1 | AuthorityHGNC:20157 | Mapping file id25831 NCBI file | EvidenceTAS |
| GeneHECTD2 | AuthorityHGNC:26736 | Mapping file id143279 NCBI file | EvidenceTAS |
| GeneHECTD3 | AuthorityHGNC:26117 | Mapping file id79654 NCBI file | EvidenceTAS |
| GeneHECW2 | AuthorityHGNC:29853 | Mapping file id57520 NCBI file | EvidenceTAS |
| GeneHERC1 | AuthorityHGNC:4867 | Mapping file id8925 NCBI file | EvidenceTAS |
| GeneHERC2 | AuthorityHGNC:4868 | Mapping file id8924 NCBI file | EvidenceTAS |
| GeneHERC3 | AuthorityHGNC:4876 | Mapping file id8916 NCBI file | EvidenceTAS |
| GeneHERC4 | AuthorityHGNC:24521 | Mapping file id26091 NCBI file | EvidenceTAS |
| GeneHERC5 | AuthorityHGNC:24368 | Mapping file id51191 NCBI file | EvidenceTAS |
| GeneHERC6 | AuthorityHGNC:26072 | Mapping file id55008 NCBI file | EvidenceTAS |
| GeneHLA-A | AuthorityHGNC:4931 | Mapping file id3105 NCBI file | EvidenceIEA, TAS |
| GeneHLA-B | AuthorityHGNC:4932 | Mapping file id3106 NCBI file | EvidenceIEA, TAS |
| GeneHLA-C | AuthorityHGNC:4933 | Mapping file id3107 NCBI file | EvidenceIEA, TAS |
| GeneHLA-E | AuthorityHGNC:4962 | Mapping file id3133 NCBI file | EvidenceIEA, TAS |
| GeneHLA-F | AuthorityHGNC:4963 | Mapping file id3134 NCBI file | EvidenceIEA, TAS |
| GeneHLA-G | AuthorityHGNC:4964 | Mapping file id3135 NCBI file | EvidenceIEA, TAS |
| GeneHMGB1 | AuthorityHGNC:4983 | Mapping file id3146 NCBI file | EvidenceTAS |
| GeneHSPA5 | AuthorityHGNC:5238 | Mapping file id3309 NCBI file | EvidenceIEA, TAS |
| GeneHUWE1 | AuthorityHGNC:30892 | Mapping file id10075 NCBI file | EvidenceTAS |
| GeneIKBKB | AuthorityHGNC:5960 | Mapping file id3551 NCBI file | EvidenceTAS |
| GeneIKBKG | AuthorityHGNC:5961 | Mapping file id8517 NCBI file | EvidenceTAS |
| GeneITCH | AuthorityHGNC:13890 | Mapping file id83737 NCBI file | EvidenceTAS |
| GeneITGAV | AuthorityHGNC:6150 | Mapping file id3685 NCBI file | EvidenceTAS |
| GeneITGB5 | AuthorityHGNC:6160 | Mapping file id3693 NCBI file | EvidenceTAS |
| GeneKBTBD13 | AuthorityHGNC:37227 | Mapping file id390594 NCBI file | EvidenceTAS |
| GeneKBTBD6 | AuthorityHGNC:25340 | Mapping file id89890 NCBI file | EvidenceTAS |
| GeneKBTBD7 | AuthorityHGNC:25266 | Mapping file id84078 NCBI file | EvidenceTAS |
| GeneKBTBD8 | AuthorityHGNC:30691 | Mapping file id84541 NCBI file | EvidenceTAS |
| GeneKCTD6 | AuthorityHGNC:22235 | Mapping file id200845 NCBI file | EvidenceTAS |
| GeneKCTD7 | AuthorityHGNC:21957 | Mapping file id154881 NCBI file | EvidenceTAS |
| GeneKEAP1 | AuthorityHGNC:23177 | Mapping file id9817 NCBI file | EvidenceTAS |
| GeneKLHL11 | AuthorityHGNC:19008 | Mapping file id55175 NCBI file | EvidenceTAS |
| GeneKLHL13 | AuthorityHGNC:22931 | Mapping file id90293 NCBI file | EvidenceTAS |
| GeneKLHL2 | AuthorityHGNC:6353 | Mapping file id11275 NCBI file | EvidenceTAS |
| GeneKLHL20 | AuthorityHGNC:25056 | Mapping file id27252 NCBI file | EvidenceTAS |
| GeneKLHL21 | AuthorityHGNC:29041 | Mapping file id9903 NCBI file | EvidenceTAS |
| GeneKLHL22 | AuthorityHGNC:25888 | Mapping file id84861 NCBI file | EvidenceTAS |
| GeneKLHL25 | AuthorityHGNC:25732 | Mapping file id64410 NCBI file | EvidenceTAS |
| GeneKLHL3 | AuthorityHGNC:6354 | Mapping file id26249 NCBI file | EvidenceTAS |
| GeneKLHL41 | AuthorityHGNC:16905 | Mapping file id10324 NCBI file | EvidenceTAS |
| GeneKLHL42 | AuthorityHGNC:29252 | Mapping file id57542 NCBI file | EvidenceTAS |
| GeneKLHL5 | AuthorityHGNC:6356 | Mapping file id51088 NCBI file | EvidenceTAS |
| GeneKLHL9 | AuthorityHGNC:18732 | Mapping file id55958 NCBI file | EvidenceTAS |
| GeneLMO7 | AuthorityHGNC:6646 | Mapping file id4008 NCBI file | EvidenceTAS |
| GeneLNPEP | AuthorityHGNC:6656 | Mapping file id4012 NCBI file | EvidenceTAS |
| GeneLNX1 | AuthorityHGNC:6657 | Mapping file id84708 NCBI file | EvidenceTAS |
| GeneLONRF1 | AuthorityHGNC:26302 | Mapping file id91694 NCBI file | EvidenceTAS |
| GeneLRR1 | AuthorityHGNC:19742 | Mapping file id122769 NCBI file | EvidenceTAS |
| GeneLRRC41 | AuthorityHGNC:16917 | Mapping file id10489 NCBI file | EvidenceTAS |
| GeneLRSAM1 | AuthorityHGNC:25135 | Mapping file id90678 NCBI file | EvidenceTAS |
| GeneLTN1 | AuthorityHGNC:13082 | Mapping file id26046 NCBI file | EvidenceTAS |
| GeneLY96 | AuthorityHGNC:17156 | Mapping file id23643 NCBI file | EvidenceTAS |
| GeneMEX3C | AuthorityHGNC:28040 | Mapping file id51320 NCBI file | EvidenceTAS |
| GeneMGRN1 | AuthorityHGNC:20254 | Mapping file id23295 NCBI file | EvidenceTAS |
| GeneMIB2 | AuthorityHGNC:30577 | Mapping file id142678 NCBI file | EvidenceTAS |
| GeneMKRN1 | AuthorityHGNC:7112 | Mapping file id23608 NCBI file | EvidenceTAS |
| GeneMRC1 | AuthorityHGNC:7228 | Mapping file id4360 NCBI file | EvidenceIEA, TAS |
| GeneMRC2 | AuthorityHGNC:16875 | Mapping file id9902 NCBI file | EvidenceIEA, TAS |
| GeneMYD88 | AuthorityHGNC:7562 | Mapping file id4615 NCBI file | EvidenceTAS |
| GeneMYLIP | AuthorityHGNC:21155 | Mapping file id29116 NCBI file | EvidenceTAS |
| GeneNCF1 | AuthorityHGNC:7660 | Mapping file id653361 NCBI file | EvidenceTAS |
| GeneNCF2 | AuthorityHGNC:7661 | Mapping file id4688 NCBI file | EvidenceTAS |
| GeneNCF4 | AuthorityHGNC:7662 | Mapping file id4689 NCBI file | EvidenceTAS |
| GeneNEDD4 | AuthorityHGNC:7727 | Mapping file id4734 NCBI file | EvidenceTAS |
| GeneNEDD4L | AuthorityHGNC:7728 | Mapping file id23327 NCBI file | EvidenceTAS |
| GeneNPEPPS | AuthorityHGNC:7900 | Mapping file id9520 NCBI file | EvidenceTAS |
| GenePDIA3 | AuthorityHGNC:4606 | Mapping file id2923 NCBI file | EvidenceIEA, TAS |
| GenePIK3C3 | AuthorityHGNC:8974 | Mapping file id5289 NCBI file | EvidenceTAS |
| GenePIK3R4 | AuthorityHGNC:8982 | Mapping file id30849 NCBI file | EvidenceTAS |
| GenePJA1 | AuthorityHGNC:16648 | Mapping file id64219 NCBI file | EvidenceTAS |
| GenePJA2 | AuthorityHGNC:17481 | Mapping file id9867 NCBI file | EvidenceTAS |
| GenePRKN | AuthorityHGNC:8607 | Mapping file id5071 NCBI file | EvidenceTAS |
| GenePSMA1 | AuthorityHGNC:9530 | Mapping file id5682 NCBI file | EvidenceIEA, TAS |
| GenePSMA2 | AuthorityHGNC:9531 | Mapping file id5683 NCBI file | EvidenceIEA, TAS |
| GenePSMA3 | AuthorityHGNC:9532 | Mapping file id5684 NCBI file | EvidenceIEA, TAS |
| GenePSMA4 | AuthorityHGNC:9533 | Mapping file id5685 NCBI file | EvidenceIEA, TAS |
| GenePSMA5 | AuthorityHGNC:9534 | Mapping file id5686 NCBI file | EvidenceIEA, TAS |
Evidence codes on this page: IEA, TAS, as the mapping file writes them; a row carrying two was written twice by the file, once under each. The mapping file id says which file placed the gene: an NCBI Gene id from NCBI2Reactome_All_Levels.txt, an Ensembl gene id from Ensembl2Reactome_All_Levels.txt. The two files can disagree about a code, so a row's codes are the one file's view. Measured by this site's build over this release on 2026-09-09: of the 138,908 human pathway-gene pairs both files place, 207 (0.149 per cent, over 47 genes) carry TAS in the Ensembl file where the NCBI rows carry IEA alone.
- Reactome mapping files, the human rows for this pathway · Reactome release 97 · read · Reactome downloads"NCBI2Reactome_All_Levels.txt" and "Ensembl2Reactome_All_Levels.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.
03The hierarchy
Parents and children in this release's hierarchy
Children
- Antigen Presentation: Folding, assembly and peptide loading of class I MHCR-HSA-98317030 genes
- Antigen processing-Cross presentationR-HSA-123697599 genes
- Antigen processing: Ub, ATP-independent proteasomal degradationR-HSA-991263319 genes
- Antigen processing: Ubiquitination & Proteasome degradationR-HSA-983168296 genes
Reactome's hierarchy is a graph rather than a tree: a pathway can sit under more than one parent, and the gene counts are each pathway's own placements at every level under it, so a parent's count is not the sum of its children's.
- Reactome, the human pathway list and hierarchy relationship file · Reactome release 97 · read · Reactome downloads"ReactomePathways.txt" and "ReactomePathwaysRelation.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.