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Pathway Human Homo sapiens

Class I MHC mediated antigen processing & presentation

R-HSA-983169 in Reactome release 97: under Adaptive Immune System, with 376 genes placed in it by the mapping files and 4 child pathways in the hierarchy.

The same number in the other species

Reactome writes the mouse and rat events it infers from a human pathway under the human number with the species token. A door opens only where that species' own list in this release holds the id: R-MMU-983169 (mouse), R-RNO-983169 (rat). Whether the event was inferred from this one is what the record says.

01The record

Reactome's own record of this pathway

What this tells you

The pathway list, the hierarchy and the genes on this page are read from the files Reactome publishes for Reactome release 97, built into this site on 2026-09-09: the pathway list, the hierarchy relationship file and the two gene mapping files. The record card is the one live read, Reactome's own record of this pathway.

Reactome's download page describes the mapping files: Mapping files link the source database identifier to the lowest level pathway diagram or subset of the pathway, all levels of the pathway hierarchy or database identifier to all reactions. [R13] The gene list here is the all-levels mapping of NCBI Gene ids, filled from the all-levels mapping of Ensembl ids where the NCBI file has no row for a gene; each row names which file it came from by the shape of its source id. Each row carries the evidence codes the file writes for it, as written and unranked, and both where the file writes both; no page of Reactome's documentation the survey read defines the codes, so this page does not expand them. A gene id the identity files do not name is kept as the source's own id with no door rather than turned into a symbol.

On citing what a search finds, Reactome says: It should be remembered that while we strive to contain the most current and accurate data, Reactome should not be used in citations where other primary sources of information are available. [R12] The record card prints the literature Reactome attaches to a curated pathway for that reason. The data are public domain: All data in the Reactome database and files derived from that data are licensed under the Creative Commons Public Domain Dedication (CC0). User may copy, modify, and distribute these data, even for commercial purposes, without asking for permission. Attribution is encouraged but not required. [R10] The pathway illustrations are licensed apart, under CC BY 4.0, and none is shown here.

A gene on this list is one Reactome places in this pathway in this release, and that is all the row says: it does not say the gene is expressed in a tissue or associated with a disease, which are the other two explorers' questions, read from other sources. Reactome's papers of record are [R01] [R02].

  1. [R01] Ragueneau E, Gong C, Sinquin P, Sevilla C, Beavers D, Grentner A, et al. (2026). The Reactome Knowledgebase 2026. Nucleic Acids Research 54:D673-D681. PMID 41251150, doi 10.1093/nar/gkaf1223.
  2. [R02] Milacic M, Beavers D, Conley P, Gong C, Gillespie M, Griss J, et al. (2024). The Reactome Pathway Knowledgebase 2024. Nucleic Acids Research 52:D672-D678. PMID 37941124, doi 10.1093/nar/gkad1025.
  3. [R10] Reactome, reactome.org. License Agreement. https://reactome.org/license, read 2026-09-09.
  4. [R12] Reactome, reactome.org. Citing us. https://reactome.org/cite, read 2026-09-09.
  5. [R13] Reactome, reactome.org. Download. https://reactome.org/download-data, read 2026-09-09.
Reading this pathway's record from Reactome (the pathway record).Still reading. A first read of a pathway can take a while; this page waits up to 35 seconds for it, and its scripts then bring in the panel, or a line saying what did not arrive.

02The genes

Genes Reactome places in this human pathway

The mapping files place 376 genes in this human pathway; showing 101 to 200, in pages of 100, sorted by symbol for reading. The order carries no ranking.

Genes Reactome places in this human pathway, page 2 of 4
GeneFBXO44AuthorityHGNC:24847Mapping file id93611 NCBI fileEvidenceTAS
GeneFBXO6AuthorityHGNC:13585Mapping file id26270 NCBI fileEvidenceTAS
GeneFBXO7AuthorityHGNC:13586Mapping file id25793 NCBI fileEvidenceTAS
GeneFBXO9AuthorityHGNC:13588Mapping file id26268 NCBI fileEvidenceTAS
GeneFBXW10AuthorityHGNC:1211Mapping file id10517 NCBI fileEvidenceTAS
GeneFBXW11AuthorityHGNC:13607Mapping file id23291 NCBI fileEvidenceTAS
GeneFBXW12AuthorityHGNC:20729Mapping file id285231 NCBI fileEvidenceTAS
GeneFBXW2AuthorityHGNC:13608Mapping file id26190 NCBI fileEvidenceTAS
GeneFBXW4AuthorityHGNC:10847Mapping file id6468 NCBI fileEvidenceTAS
GeneFBXW5AuthorityHGNC:13613Mapping file id54461 NCBI fileEvidenceTAS
GeneFBXW7AuthorityHGNC:16712Mapping file id55294 NCBI fileEvidenceTAS
GeneFBXW8AuthorityHGNC:13597Mapping file id26259 NCBI fileEvidenceTAS
GeneFBXW9AuthorityHGNC:28136Mapping file id84261 NCBI fileEvidenceTAS
GeneFCGR1AAuthorityHGNC:3613Mapping file id2209 NCBI fileEvidenceIEA, TAS
GeneFCGR1BPAuthorityHGNC:3614Mapping file idENSG00000198019 Ensembl fileEvidenceIEA, TAS
GeneFGAAuthorityHGNC:3661Mapping file id2243 NCBI fileEvidenceTAS
GeneFGBAuthorityHGNC:3662Mapping file id2244 NCBI fileEvidenceTAS
GeneFGGAuthorityHGNC:3694Mapping file id2266 NCBI fileEvidenceTAS
GeneFZR1AuthorityHGNC:24824Mapping file id51343 NCBI fileEvidenceTAS
GeneGANAuthorityHGNC:4137Mapping file id8139 NCBI fileEvidenceTAS
GeneGLMNAuthorityHGNC:14373Mapping file id11146 NCBI fileEvidenceTAS
GeneGPR75-ASB3AuthorityHGNC:40043Mapping file id100302652 NCBI fileEvidenceTAS
GeneHACE1AuthorityHGNC:21033Mapping file id57531 NCBI fileEvidenceTAS
GeneHECTD1AuthorityHGNC:20157Mapping file id25831 NCBI fileEvidenceTAS
GeneHECTD2AuthorityHGNC:26736Mapping file id143279 NCBI fileEvidenceTAS
GeneHECTD3AuthorityHGNC:26117Mapping file id79654 NCBI fileEvidenceTAS
GeneHECW2AuthorityHGNC:29853Mapping file id57520 NCBI fileEvidenceTAS
GeneHERC1AuthorityHGNC:4867Mapping file id8925 NCBI fileEvidenceTAS
GeneHERC2AuthorityHGNC:4868Mapping file id8924 NCBI fileEvidenceTAS
GeneHERC3AuthorityHGNC:4876Mapping file id8916 NCBI fileEvidenceTAS
GeneHERC4AuthorityHGNC:24521Mapping file id26091 NCBI fileEvidenceTAS
GeneHERC5AuthorityHGNC:24368Mapping file id51191 NCBI fileEvidenceTAS
GeneHERC6AuthorityHGNC:26072Mapping file id55008 NCBI fileEvidenceTAS
GeneHLA-AAuthorityHGNC:4931Mapping file id3105 NCBI fileEvidenceIEA, TAS
GeneHLA-BAuthorityHGNC:4932Mapping file id3106 NCBI fileEvidenceIEA, TAS
GeneHLA-CAuthorityHGNC:4933Mapping file id3107 NCBI fileEvidenceIEA, TAS
GeneHLA-EAuthorityHGNC:4962Mapping file id3133 NCBI fileEvidenceIEA, TAS
GeneHLA-FAuthorityHGNC:4963Mapping file id3134 NCBI fileEvidenceIEA, TAS
GeneHLA-GAuthorityHGNC:4964Mapping file id3135 NCBI fileEvidenceIEA, TAS
GeneHMGB1AuthorityHGNC:4983Mapping file id3146 NCBI fileEvidenceTAS
GeneHSPA5AuthorityHGNC:5238Mapping file id3309 NCBI fileEvidenceIEA, TAS
GeneHUWE1AuthorityHGNC:30892Mapping file id10075 NCBI fileEvidenceTAS
GeneIKBKBAuthorityHGNC:5960Mapping file id3551 NCBI fileEvidenceTAS
GeneIKBKGAuthorityHGNC:5961Mapping file id8517 NCBI fileEvidenceTAS
GeneITCHAuthorityHGNC:13890Mapping file id83737 NCBI fileEvidenceTAS
GeneITGAVAuthorityHGNC:6150Mapping file id3685 NCBI fileEvidenceTAS
GeneITGB5AuthorityHGNC:6160Mapping file id3693 NCBI fileEvidenceTAS
GeneKBTBD13AuthorityHGNC:37227Mapping file id390594 NCBI fileEvidenceTAS
GeneKBTBD6AuthorityHGNC:25340Mapping file id89890 NCBI fileEvidenceTAS
GeneKBTBD7AuthorityHGNC:25266Mapping file id84078 NCBI fileEvidenceTAS
GeneKBTBD8AuthorityHGNC:30691Mapping file id84541 NCBI fileEvidenceTAS
GeneKCTD6AuthorityHGNC:22235Mapping file id200845 NCBI fileEvidenceTAS
GeneKCTD7AuthorityHGNC:21957Mapping file id154881 NCBI fileEvidenceTAS
GeneKEAP1AuthorityHGNC:23177Mapping file id9817 NCBI fileEvidenceTAS
GeneKLHL11AuthorityHGNC:19008Mapping file id55175 NCBI fileEvidenceTAS
GeneKLHL13AuthorityHGNC:22931Mapping file id90293 NCBI fileEvidenceTAS
GeneKLHL2AuthorityHGNC:6353Mapping file id11275 NCBI fileEvidenceTAS
GeneKLHL20AuthorityHGNC:25056Mapping file id27252 NCBI fileEvidenceTAS
GeneKLHL21AuthorityHGNC:29041Mapping file id9903 NCBI fileEvidenceTAS
GeneKLHL22AuthorityHGNC:25888Mapping file id84861 NCBI fileEvidenceTAS
GeneKLHL25AuthorityHGNC:25732Mapping file id64410 NCBI fileEvidenceTAS
GeneKLHL3AuthorityHGNC:6354Mapping file id26249 NCBI fileEvidenceTAS
GeneKLHL41AuthorityHGNC:16905Mapping file id10324 NCBI fileEvidenceTAS
GeneKLHL42AuthorityHGNC:29252Mapping file id57542 NCBI fileEvidenceTAS
GeneKLHL5AuthorityHGNC:6356Mapping file id51088 NCBI fileEvidenceTAS
GeneKLHL9AuthorityHGNC:18732Mapping file id55958 NCBI fileEvidenceTAS
GeneLMO7AuthorityHGNC:6646Mapping file id4008 NCBI fileEvidenceTAS
GeneLNPEPAuthorityHGNC:6656Mapping file id4012 NCBI fileEvidenceTAS
GeneLNX1AuthorityHGNC:6657Mapping file id84708 NCBI fileEvidenceTAS
GeneLONRF1AuthorityHGNC:26302Mapping file id91694 NCBI fileEvidenceTAS
GeneLRR1AuthorityHGNC:19742Mapping file id122769 NCBI fileEvidenceTAS
GeneLRRC41AuthorityHGNC:16917Mapping file id10489 NCBI fileEvidenceTAS
GeneLRSAM1AuthorityHGNC:25135Mapping file id90678 NCBI fileEvidenceTAS
GeneLTN1AuthorityHGNC:13082Mapping file id26046 NCBI fileEvidenceTAS
GeneLY96AuthorityHGNC:17156Mapping file id23643 NCBI fileEvidenceTAS
GeneMEX3CAuthorityHGNC:28040Mapping file id51320 NCBI fileEvidenceTAS
GeneMGRN1AuthorityHGNC:20254Mapping file id23295 NCBI fileEvidenceTAS
GeneMIB2AuthorityHGNC:30577Mapping file id142678 NCBI fileEvidenceTAS
GeneMKRN1AuthorityHGNC:7112Mapping file id23608 NCBI fileEvidenceTAS
GeneMRC1AuthorityHGNC:7228Mapping file id4360 NCBI fileEvidenceIEA, TAS
GeneMRC2AuthorityHGNC:16875Mapping file id9902 NCBI fileEvidenceIEA, TAS
GeneMYD88AuthorityHGNC:7562Mapping file id4615 NCBI fileEvidenceTAS
GeneMYLIPAuthorityHGNC:21155Mapping file id29116 NCBI fileEvidenceTAS
GeneNCF1AuthorityHGNC:7660Mapping file id653361 NCBI fileEvidenceTAS
GeneNCF2AuthorityHGNC:7661Mapping file id4688 NCBI fileEvidenceTAS
GeneNCF4AuthorityHGNC:7662Mapping file id4689 NCBI fileEvidenceTAS
GeneNEDD4AuthorityHGNC:7727Mapping file id4734 NCBI fileEvidenceTAS
GeneNEDD4LAuthorityHGNC:7728Mapping file id23327 NCBI fileEvidenceTAS
GeneNPEPPSAuthorityHGNC:7900Mapping file id9520 NCBI fileEvidenceTAS
GenePDIA3AuthorityHGNC:4606Mapping file id2923 NCBI fileEvidenceIEA, TAS
GenePIK3C3AuthorityHGNC:8974Mapping file id5289 NCBI fileEvidenceTAS
GenePIK3R4AuthorityHGNC:8982Mapping file id30849 NCBI fileEvidenceTAS
GenePJA1AuthorityHGNC:16648Mapping file id64219 NCBI fileEvidenceTAS
GenePJA2AuthorityHGNC:17481Mapping file id9867 NCBI fileEvidenceTAS
GenePRKNAuthorityHGNC:8607Mapping file id5071 NCBI fileEvidenceTAS
GenePSMA1AuthorityHGNC:9530Mapping file id5682 NCBI fileEvidenceIEA, TAS
GenePSMA2AuthorityHGNC:9531Mapping file id5683 NCBI fileEvidenceIEA, TAS
GenePSMA3AuthorityHGNC:9532Mapping file id5684 NCBI fileEvidenceIEA, TAS
GenePSMA4AuthorityHGNC:9533Mapping file id5685 NCBI fileEvidenceIEA, TAS
GenePSMA5AuthorityHGNC:9534Mapping file id5686 NCBI fileEvidenceIEA, TAS

Evidence codes on this page: IEA, TAS, as the mapping file writes them; a row carrying two was written twice by the file, once under each. The mapping file id says which file placed the gene: an NCBI Gene id from NCBI2Reactome_All_Levels.txt, an Ensembl gene id from Ensembl2Reactome_All_Levels.txt. The two files can disagree about a code, so a row's codes are the one file's view. Measured by this site's build over this release on 2026-09-09: of the 138,908 human pathway-gene pairs both files place, 207 (0.149 per cent, over 47 genes) carry TAS in the Ensembl file where the NCBI rows carry IEA alone.

  • Reactome mapping files, the human rows for this pathway · Reactome release 97 · read · Reactome downloads"NCBI2Reactome_All_Levels.txt" and "Ensembl2Reactome_All_Levels.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.

03The hierarchy

Parents and children in this release's hierarchy

Reactome's hierarchy is a graph rather than a tree: a pathway can sit under more than one parent, and the gene counts are each pathway's own placements at every level under it, so a parent's count is not the sum of its children's.

  • Reactome, the human pathway list and hierarchy relationship file · Reactome release 97 · read · Reactome downloads"ReactomePathways.txt" and "ReactomePathwaysRelation.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.