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Pathway Human Homo sapiens

Class I MHC mediated antigen processing & presentation

R-HSA-983169 in Reactome release 97: under Adaptive Immune System, with 376 genes placed in it by the mapping files and 4 child pathways in the hierarchy.

The same number in the other species

Reactome writes the mouse and rat events it infers from a human pathway under the human number with the species token. A door opens only where that species' own list in this release holds the id: R-MMU-983169 (mouse), R-RNO-983169 (rat). Whether the event was inferred from this one is what the record says.

01The record

Reactome's own record of this pathway

What this tells you

The pathway list, the hierarchy and the genes on this page are read from the files Reactome publishes for Reactome release 97, built into this site on 2026-09-09: the pathway list, the hierarchy relationship file and the two gene mapping files. The record card is the one live read, Reactome's own record of this pathway.

Reactome's download page describes the mapping files: Mapping files link the source database identifier to the lowest level pathway diagram or subset of the pathway, all levels of the pathway hierarchy or database identifier to all reactions. [R13] The gene list here is the all-levels mapping of NCBI Gene ids, filled from the all-levels mapping of Ensembl ids where the NCBI file has no row for a gene; each row names which file it came from by the shape of its source id. Each row carries the evidence codes the file writes for it, as written and unranked, and both where the file writes both; no page of Reactome's documentation the survey read defines the codes, so this page does not expand them. A gene id the identity files do not name is kept as the source's own id with no door rather than turned into a symbol.

On citing what a search finds, Reactome says: It should be remembered that while we strive to contain the most current and accurate data, Reactome should not be used in citations where other primary sources of information are available. [R12] The record card prints the literature Reactome attaches to a curated pathway for that reason. The data are public domain: All data in the Reactome database and files derived from that data are licensed under the Creative Commons Public Domain Dedication (CC0). User may copy, modify, and distribute these data, even for commercial purposes, without asking for permission. Attribution is encouraged but not required. [R10] The pathway illustrations are licensed apart, under CC BY 4.0, and none is shown here.

A gene on this list is one Reactome places in this pathway in this release, and that is all the row says: it does not say the gene is expressed in a tissue or associated with a disease, which are the other two explorers' questions, read from other sources. Reactome's papers of record are [R01] [R02].

  1. [R01] Ragueneau E, Gong C, Sinquin P, Sevilla C, Beavers D, Grentner A, et al. (2026). The Reactome Knowledgebase 2026. Nucleic Acids Research 54:D673-D681. PMID 41251150, doi 10.1093/nar/gkaf1223.
  2. [R02] Milacic M, Beavers D, Conley P, Gong C, Gillespie M, Griss J, et al. (2024). The Reactome Pathway Knowledgebase 2024. Nucleic Acids Research 52:D672-D678. PMID 37941124, doi 10.1093/nar/gkad1025.
  3. [R10] Reactome, reactome.org. License Agreement. https://reactome.org/license, read 2026-09-09.
  4. [R12] Reactome, reactome.org. Citing us. https://reactome.org/cite, read 2026-09-09.
  5. [R13] Reactome, reactome.org. Download. https://reactome.org/download-data, read 2026-09-09.
Reading this pathway's record from Reactome (the pathway record).Still reading. A first read of a pathway can take a while; this page waits up to 35 seconds for it, and its scripts then bring in the panel, or a line saying what did not arrive.

02The genes

Genes Reactome places in this human pathway

The mapping files place 376 genes in this human pathway; showing 201 to 300, in pages of 100, sorted by symbol for reading. The order carries no ranking.

Genes Reactome places in this human pathway, page 3 of 4
GenePSMA6AuthorityHGNC:9535Mapping file id5687 NCBI fileEvidenceIEA, TAS
GenePSMA7AuthorityHGNC:9536Mapping file id5688 NCBI fileEvidenceIEA, TAS
GenePSMB1AuthorityHGNC:9537Mapping file id5689 NCBI fileEvidenceIEA, TAS
GenePSMB10AuthorityHGNC:9538Mapping file id5699 NCBI fileEvidenceTAS
GenePSMB2AuthorityHGNC:9539Mapping file id5690 NCBI fileEvidenceIEA, TAS
GenePSMB3AuthorityHGNC:9540Mapping file id5691 NCBI fileEvidenceIEA, TAS
GenePSMB4AuthorityHGNC:9541Mapping file id5692 NCBI fileEvidenceIEA, TAS
GenePSMB5AuthorityHGNC:9542Mapping file id5693 NCBI fileEvidenceIEA, TAS
GenePSMB6AuthorityHGNC:9543Mapping file id5694 NCBI fileEvidenceIEA, TAS
GenePSMB7AuthorityHGNC:9544Mapping file id5695 NCBI fileEvidenceIEA, TAS
GenePSMB8AuthorityHGNC:9545Mapping file id5696 NCBI fileEvidenceTAS
GenePSMB9AuthorityHGNC:9546Mapping file id5698 NCBI fileEvidenceTAS
GenePSMC1AuthorityHGNC:9547Mapping file id5700 NCBI fileEvidenceIEA, TAS
GenePSMC2AuthorityHGNC:9548Mapping file id5701 NCBI fileEvidenceIEA, TAS
GenePSMC3AuthorityHGNC:9549Mapping file id5702 NCBI fileEvidenceIEA, TAS
GenePSMC4AuthorityHGNC:9551Mapping file id5704 NCBI fileEvidenceIEA, TAS
GenePSMC5AuthorityHGNC:9552Mapping file id5705 NCBI fileEvidenceIEA, TAS
GenePSMC6AuthorityHGNC:9553Mapping file id5706 NCBI fileEvidenceIEA, TAS
GenePSMD1AuthorityHGNC:9554Mapping file id5707 NCBI fileEvidenceIEA, TAS
GenePSMD11AuthorityHGNC:9556Mapping file id5717 NCBI fileEvidenceIEA, TAS
GenePSMD12AuthorityHGNC:9557Mapping file id5718 NCBI fileEvidenceIEA, TAS
GenePSMD13AuthorityHGNC:9558Mapping file id5719 NCBI fileEvidenceIEA, TAS
GenePSMD14AuthorityHGNC:16889Mapping file id10213 NCBI fileEvidenceIEA, TAS
GenePSMD2AuthorityHGNC:9559Mapping file id5708 NCBI fileEvidenceIEA, TAS
GenePSMD3AuthorityHGNC:9560Mapping file id5709 NCBI fileEvidenceIEA, TAS
GenePSMD6AuthorityHGNC:9564Mapping file id9861 NCBI fileEvidenceIEA, TAS
GenePSMD7AuthorityHGNC:9565Mapping file id5713 NCBI fileEvidenceIEA, TAS
GenePSMD8AuthorityHGNC:9566Mapping file id5714 NCBI fileEvidenceIEA, TAS
GenePSME1AuthorityHGNC:9568Mapping file id5720 NCBI fileEvidenceTAS
GenePSME2AuthorityHGNC:9569Mapping file id5721 NCBI fileEvidenceTAS
GeneRBBP6AuthorityHGNC:9889Mapping file id5930 NCBI fileEvidenceTAS
GeneRBCK1AuthorityHGNC:15864Mapping file id10616 NCBI fileEvidenceTAS
GeneRBX1AuthorityHGNC:9928Mapping file id9978 NCBI fileEvidenceTAS
GeneRCHY1AuthorityHGNC:17479Mapping file id25898 NCBI fileEvidenceTAS
GeneRLIMAuthorityHGNC:13429Mapping file id51132 NCBI fileEvidenceTAS
GeneRNF111AuthorityHGNC:17384Mapping file id54778 NCBI fileEvidenceTAS
GeneRNF114AuthorityHGNC:13094Mapping file id55905 NCBI fileEvidenceTAS
GeneRNF115AuthorityHGNC:18154Mapping file id27246 NCBI fileEvidenceTAS
GeneRNF123AuthorityHGNC:21148Mapping file id63891 NCBI fileEvidenceTAS
GeneRNF126AuthorityHGNC:21151Mapping file id55658 NCBI fileEvidenceTAS
GeneRNF130AuthorityHGNC:18280Mapping file id55819 NCBI fileEvidenceTAS
GeneRNF138AuthorityHGNC:17765Mapping file id51444 NCBI fileEvidenceTAS
GeneRNF14AuthorityHGNC:10058Mapping file id9604 NCBI fileEvidenceTAS
GeneRNF144BAuthorityHGNC:21578Mapping file id255488 NCBI fileEvidenceTAS
GeneRNF182AuthorityHGNC:28522Mapping file id221687 NCBI fileEvidenceTAS
GeneRNF19AAuthorityHGNC:13432Mapping file id25897 NCBI fileEvidenceTAS
GeneRNF19BAuthorityHGNC:26886Mapping file id127544 NCBI fileEvidenceTAS
GeneRNF213AuthorityHGNC:14539Mapping file id57674 NCBI fileEvidenceTAS
GeneRNF217AuthorityHGNC:21487Mapping file id154214 NCBI fileEvidenceTAS
GeneRNF220AuthorityHGNC:25552Mapping file id55182 NCBI fileEvidenceTAS
GeneRNF25AuthorityHGNC:14662Mapping file id64320 NCBI fileEvidenceTAS
GeneRNF34AuthorityHGNC:17297Mapping file id80196 NCBI fileEvidenceTAS
GeneRNF4AuthorityHGNC:10067Mapping file id6047 NCBI fileEvidenceTAS
GeneRNF41AuthorityHGNC:18401Mapping file id10193 NCBI fileEvidenceTAS
GeneRNF6AuthorityHGNC:10069Mapping file id6049 NCBI fileEvidenceTAS
GeneRNF7AuthorityHGNC:10070Mapping file id9616 NCBI fileEvidenceTAS
GeneRPS27AAuthorityHGNC:10417Mapping file id6233 NCBI fileEvidenceIEA, TAS
GeneS100A1AuthorityHGNC:10486Mapping file id6271 NCBI fileEvidenceTAS
GeneS100A8AuthorityHGNC:10498Mapping file id6279 NCBI fileEvidenceTAS
GeneS100A9AuthorityHGNC:10499Mapping file id6280 NCBI fileEvidenceTAS
GeneSAR1BAuthorityHGNC:10535Mapping file id51128 NCBI fileEvidenceTAS
GeneSEC13AuthorityHGNC:10697Mapping file id6396 NCBI fileEvidenceTAS
GeneSEC22BAuthorityHGNC:10700Mapping file id9554 NCBI fileEvidenceTAS
GeneSEC23AAuthorityHGNC:10701Mapping file id10484 NCBI fileEvidenceTAS
GeneSEC24AAuthorityHGNC:10703Mapping file id10802 NCBI fileEvidenceTAS
GeneSEC24BAuthorityHGNC:10704Mapping file id10427 NCBI fileEvidenceTAS
GeneSEC24CAuthorityHGNC:10705Mapping file id9632 NCBI fileEvidenceTAS
GeneSEC24DAuthorityHGNC:10706Mapping file id9871 NCBI fileEvidenceTAS
GeneSEC31AAuthorityHGNC:17052Mapping file id22872 NCBI fileEvidenceTAS
GeneSEC61A1AuthorityHGNC:18276Mapping file id29927 NCBI fileEvidenceIEA
GeneSEC61A2AuthorityHGNC:17702Mapping file id55176 NCBI fileEvidenceIEA
GeneSEC61BAuthorityHGNC:16993Mapping file id10952 NCBI fileEvidenceIEA
GeneSEC61GAuthorityHGNC:18277Mapping file id23480 NCBI fileEvidenceIEA
GeneSEM1AuthorityHGNC:10845Mapping file id7979 NCBI fileEvidenceIEA, TAS
GeneSH3RF1AuthorityHGNC:17650Mapping file id57630 NCBI fileEvidenceTAS
GeneSIAH1AuthorityHGNC:10857Mapping file id6477 NCBI fileEvidenceTAS
GeneSIAH2AuthorityHGNC:10858Mapping file id6478 NCBI fileEvidenceTAS
GeneSKP1AuthorityHGNC:10899Mapping file id6500 NCBI fileEvidenceTAS
GeneSKP2AuthorityHGNC:10901Mapping file id6502 NCBI fileEvidenceTAS
GeneSMURF1AuthorityHGNC:16807Mapping file id57154 NCBI fileEvidenceTAS
GeneSMURF2AuthorityHGNC:16809Mapping file id64750 NCBI fileEvidenceTAS
GeneSNAP23AuthorityHGNC:11131Mapping file id8773 NCBI fileEvidenceTAS
GeneSOCS1AuthorityHGNC:19383Mapping file id8651 NCBI fileEvidenceTAS
GeneSOCS3AuthorityHGNC:19391Mapping file id9021 NCBI fileEvidenceTAS
GeneSPSB1AuthorityHGNC:30628Mapping file id80176 NCBI fileEvidenceTAS
GeneSPSB2AuthorityHGNC:29522Mapping file id84727 NCBI fileEvidenceTAS
GeneSPSB4AuthorityHGNC:30630Mapping file id92369 NCBI fileEvidenceTAS
GeneSTUB1AuthorityHGNC:11427Mapping file id10273 NCBI fileEvidenceTAS
GeneSTX4AuthorityHGNC:11439Mapping file id6810 NCBI fileEvidenceTAS
GeneTAP1AuthorityHGNC:43Mapping file id6890 NCBI fileEvidenceIEA, TAS
GeneTAP2AuthorityHGNC:44Mapping file id6891 NCBI fileEvidenceIEA, TAS
GeneTAPBPAuthorityHGNC:11566Mapping file id6892 NCBI fileEvidenceTAS
GeneTHOP1AuthorityHGNC:11793Mapping file id7064 NCBI fileEvidenceTAS
GeneTIRAPAuthorityHGNC:17192Mapping file id114609 NCBI fileEvidenceTAS
GeneTLR1AuthorityHGNC:11847Mapping file id7096 NCBI fileEvidenceTAS
GeneTLR2AuthorityHGNC:11848Mapping file id7097 NCBI fileEvidenceTAS
GeneTLR4AuthorityHGNC:11850Mapping file id7099 NCBI fileEvidenceTAS
GeneTLR6AuthorityHGNC:16711Mapping file id10333 NCBI fileEvidenceTAS
GeneTPP2AuthorityHGNC:12016Mapping file id7174 NCBI fileEvidenceTAS
GeneTRAF7AuthorityHGNC:20456Mapping file id84231 NCBI fileEvidenceTAS

Evidence codes on this page: IEA, TAS, as the mapping file writes them; a row carrying two was written twice by the file, once under each. The mapping file id says which file placed the gene: an NCBI Gene id from NCBI2Reactome_All_Levels.txt, an Ensembl gene id from Ensembl2Reactome_All_Levels.txt. The two files can disagree about a code, so a row's codes are the one file's view. Measured by this site's build over this release on 2026-09-09: of the 138,908 human pathway-gene pairs both files place, 207 (0.149 per cent, over 47 genes) carry TAS in the Ensembl file where the NCBI rows carry IEA alone.

  • Reactome mapping files, the human rows for this pathway · Reactome release 97 · read · Reactome downloads"NCBI2Reactome_All_Levels.txt" and "Ensembl2Reactome_All_Levels.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.

03The hierarchy

Parents and children in this release's hierarchy

Reactome's hierarchy is a graph rather than a tree: a pathway can sit under more than one parent, and the gene counts are each pathway's own placements at every level under it, so a parent's count is not the sum of its children's.

  • Reactome, the human pathway list and hierarchy relationship file · Reactome release 97 · read · Reactome downloads"ReactomePathways.txt" and "ReactomePathwaysRelation.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.