Skip to content
Order

Pathway Rat Rattus norvegicus

Read this first

Every rat pathway in Reactome is electronically inferred from the curated human one; Reactome's own sentence about that stands beside the record below.

Signaling by Interleukins

R-RNO-449147 in Reactome release 97: under Cytokine Signaling in Immune system, with 266 genes placed in it by the mapping files and 11 child pathways in the hierarchy.

The same number in the other species

Reactome writes the mouse and rat events it infers from a human pathway under the human number with the species token. A door opens only where that species' own list in this release holds the id: R-HSA-449147 (human), R-MMU-449147 (mouse). Whether the event was inferred from this one is what the record says.

01The record

Reactome's own record of this pathway

What this tells you

The pathway list, the hierarchy and the genes on this page are read from the files Reactome publishes for Reactome release 97, built into this site on 2026-09-09: the pathway list, the hierarchy relationship file and the two gene mapping files. The record card is the one live read, Reactome's own record of this pathway.

Reactome's download page describes the mapping files: Mapping files link the source database identifier to the lowest level pathway diagram or subset of the pathway, all levels of the pathway hierarchy or database identifier to all reactions. [R13] The gene list here is the all-levels mapping of NCBI Gene ids, filled from the all-levels mapping of Ensembl ids where the NCBI file has no row for a gene; each row names which file it came from by the shape of its source id. Each row carries the evidence codes the file writes for it, as written and unranked, and both where the file writes both; no page of Reactome's documentation the survey read defines the codes, so this page does not expand them. A gene id the identity files do not name is kept as the source's own id with no door rather than turned into a symbol.

Every rat pathway in Reactome is inferred from the curated human one: We use the set of manually curated human reactions to electronically infer reactions in fourteen evolutionarily divergent eukaryotic species for which high-quality whole-genome sequence data are available, and hence a comprehensive and high-quality set of protein predictions exists. [R11] Reactome's own sentence about what that produces is printed beside the record: The electronically inferred reactions presented in Reactome are thus not data, but hypotheses useful to direct the design of confirmatory experiments. [R11]

On citing what a search finds, Reactome says: It should be remembered that while we strive to contain the most current and accurate data, Reactome should not be used in citations where other primary sources of information are available. [R12] The record card prints the literature Reactome attaches to a curated pathway for that reason. The data are public domain: All data in the Reactome database and files derived from that data are licensed under the Creative Commons Public Domain Dedication (CC0). User may copy, modify, and distribute these data, even for commercial purposes, without asking for permission. Attribution is encouraged but not required. [R10] The pathway illustrations are licensed apart, under CC BY 4.0, and none is shown here.

A gene on this list is one Reactome places in this pathway in this release, and that is all the row says: it does not say the gene is expressed in a tissue or associated with a disease, which are the other two explorers' questions, read from other sources. Reactome's papers of record are [R01] [R02].

  1. [R01] Ragueneau E, Gong C, Sinquin P, Sevilla C, Beavers D, Grentner A, et al. (2026). The Reactome Knowledgebase 2026. Nucleic Acids Research 54:D673-D681. PMID 41251150, doi 10.1093/nar/gkaf1223.
  2. [R02] Milacic M, Beavers D, Conley P, Gong C, Gillespie M, Griss J, et al. (2024). The Reactome Pathway Knowledgebase 2024. Nucleic Acids Research 52:D672-D678. PMID 37941124, doi 10.1093/nar/gkad1025.
  3. [R10] Reactome, reactome.org. License Agreement. https://reactome.org/license, read 2026-09-09.
  4. [R11] Reactome, reactome.org. Computationally inferred events. https://reactome.org/documentation/inferred-events, read 2026-09-09.
  5. [R12] Reactome, reactome.org. Citing us. https://reactome.org/cite, read 2026-09-09.
  6. [R13] Reactome, reactome.org. Download. https://reactome.org/download-data, read 2026-09-09.
Reading this pathway's record from Reactome (the pathway record).Still reading. A first read of a pathway can take a while; this page waits up to 35 seconds for it, and its scripts then bring in the panel, or a line saying what did not arrive.

02The genes

Genes Reactome places in this rat pathway

The mapping files place 266 genes in this rat pathway; showing 1 to 100, in pages of 100, sorted by symbol for reading. The order carries no ranking.

Genes Reactome places in this rat pathway, page 1 of 3
GeneAdrm1Authority65138Mapping file id65138 NCBI fileEvidenceIEA
GeneAgerAuthority81722Mapping file idENSRNOG00000000439 Ensembl fileEvidenceIEA
GeneAlpk1Authority310879Mapping file idENSRNOG00000022636 Ensembl fileEvidenceIEA
GeneAppAuthority54226Mapping file id54226 NCBI fileEvidenceIEA
GeneAtf1Authority315305Mapping file id315305 NCBI fileEvidenceIEA
GeneAtf2Authority81647Mapping file id81647 NCBI fileEvidenceIEA
GeneBrwd1Authority304061Mapping file idENSRNOG00000001632 Ensembl fileEvidenceIEA
GeneBtrcAuthority361765Mapping file id361765 NCBI fileEvidenceIEA
GeneCanxAuthority29144Mapping file id29144 NCBI fileEvidenceIEA
GeneCasp1Authority25166Mapping file idENSRNOG00000007372 Ensembl fileEvidenceIEA
GeneCasp3Authority25402Mapping file id25402 NCBI fileEvidenceIEA
GeneCasp8Authority64044Mapping file id64044 NCBI fileEvidenceIEA
GeneCblAuthority500985Mapping file id500985 NCBI fileEvidenceIEA
GeneCd4Authority24932Mapping file id24932 NCBI fileEvidenceIEA
GeneChukAuthority309361Mapping file id309361 NCBI fileEvidenceIEA
GeneClcf1Authority365395Mapping file idENSRNOG00000018752 Ensembl fileEvidenceIEA
GeneCntfAuthority25707Mapping file id25707 NCBI fileEvidenceIEA
GeneCntfrAuthority313173Mapping file id313173 NCBI fileEvidenceIEA
GeneCreb1Authority81646Mapping file id81646 NCBI fileEvidenceIEA
GeneCrkAuthority54245Mapping file id54245 NCBI fileEvidenceIEA
GeneCrklAuthority287942Mapping file id287942 NCBI fileEvidenceIEA
GeneCrlf1Authority290655Mapping file id290655 NCBI fileEvidenceIEA
GeneCsf1Authority78965Mapping file idENSRNOG00000018659 Ensembl fileEvidenceIEA
GeneCsf1rAuthority307403Mapping file idENSRNOG00000018414 Ensembl fileEvidenceIEA
GeneCsf2Authority116630Mapping file id116630 NCBI fileEvidenceIEA
GeneCsf2rbAuthority171081Mapping file id171081 NCBI fileEvidenceIEA
GeneCtf1Authority29201Mapping file id29201 NCBI fileEvidenceIEA
GeneCtsgAuthority290257Mapping file id290257 NCBI fileEvidenceIEA
GeneCul1Authority362356Mapping file idENSRNOG00000005310 Ensembl fileEvidenceIEA
GeneDusp3Authority498003Mapping file idENSRNOG00000036798 Ensembl fileEvidenceIEA
GeneDusp4Authority60587Mapping file id60587 NCBI fileEvidenceIEA
GeneDusp6Authority116663Mapping file id116663 NCBI fileEvidenceIEA
GeneDusp7Authority300980Mapping file id300980 NCBI fileEvidenceIEA
GeneEbi3Authority680609Mapping file id680609 NCBI fileEvidenceIEA
GeneFbxw11Authority303024Mapping file id303024 NCBI fileEvidenceIEA
GeneFosAuthority314322Mapping file id314322 NCBI fileEvidenceIEA
GeneFynAuthority25150Mapping file id25150 NCBI fileEvidenceIEA
GeneGab2Authority84477Mapping file id84477 NCBI fileEvidenceIEA
GeneGrb2Authority81504Mapping file id81504 NCBI fileEvidenceIEA
GeneGsdmdAuthority315084Mapping file idENSRNOG00000007728 Ensembl fileEvidenceIEA
GeneH3c1Authority679994Mapping file id679994 NCBI fileEvidenceIEA
GeneH3c10Authority291159Mapping file id291159 NCBI fileEvidenceIEA
GeneH3c13Authority684762Mapping file idENSRNOG00000080043 Ensembl fileEvidenceIEA
GeneH3c15Authority310678Mapping file idENSRNOG00000070591 Ensembl fileEvidenceIEA
GeneHckAuthority25734Mapping file id25734 NCBI fileEvidenceIEA
GeneHist1h3bAuthority680498Mapping file id680498 NCBI fileEvidenceIEA
GeneHmgb1-ps33Authority679571Mapping file idENSRNOG00000051482 Ensembl fileEvidenceIEA
GeneHmgb1-ps34Authority120099223Mapping file idENSRNOG00000068306 Ensembl fileEvidenceIEA
GeneHmgb1-ps8Authority690117Mapping file idENSRNOG00000058908 Ensembl fileEvidenceIEA
GeneHsp90b1Authority362862Mapping file id362862 NCBI fileEvidenceIEA
GeneIfnl1Authority100911249Mapping file id100911249 NCBI fileEvidenceIEA
GeneIfnl3Authority685840Mapping file id685840 NCBI fileEvidenceIEA
GeneIfnlr1Authority362628Mapping file id362628 NCBI fileEvidenceIEA
GeneIkbkbAuthority84351Mapping file id84351 NCBI fileEvidenceIEA
GeneIkbkgAuthority309295Mapping file id309295 NCBI fileEvidenceIEA
GeneIl10Authority25325Mapping file id25325 NCBI fileEvidenceIEA
GeneIl10raAuthority117539Mapping file idENSRNOG00000016308 Ensembl fileEvidenceIEA
GeneIl10rbAuthority304091Mapping file id304091 NCBI fileEvidenceIEA
GeneIl11Authority171040Mapping file idENSRNOG00000017386 Ensembl fileEvidenceIEA
GeneIl11ra1Authority245983Mapping file id245983 NCBI fileEvidenceIEA
GeneIl12aAuthority84405Mapping file id84405 NCBI fileEvidenceIEA
GeneIl12bAuthority64546Mapping file idENSRNOG00000004380 Ensembl fileEvidenceIEA
GeneIl12rb1Authority171333Mapping file id171333 NCBI fileEvidenceIEA
GeneIl12rb2Authority171334Mapping file id171334 NCBI fileEvidenceIEA
GeneIl13Authority116553Mapping file id116553 NCBI fileEvidenceIEA
GeneIl13ra2Authority171060Mapping file idENSRNOG00000032973 Ensembl fileEvidenceIEA
GeneIl15Authority25670Mapping file id25670 NCBI fileEvidenceIEA
GeneIl15raAuthority690369Mapping file id690369 NCBI fileEvidenceIEA
GeneIl16Authority116996Mapping file idENSRNOG00000011680 Ensembl fileEvidenceIEA
GeneIl18Authority29197Mapping file id29197 NCBI fileEvidenceIEA
GeneIl18bpAuthority84388Mapping file id84388 NCBI fileEvidenceIEA
GeneIl18r1Authority301365Mapping file id301365 NCBI fileEvidenceIEA
GeneIl18rapAuthority373540Mapping file id373540 NCBI fileEvidenceIEA
GeneIl19Authority681145Mapping file idENSRNOG00000087053 Ensembl fileEvidenceIEA
GeneIl1aAuthority24493Mapping file id24493 NCBI fileEvidenceIEA
GeneIl1bAuthority24494Mapping file idENSRNOG00000004649 Ensembl fileEvidenceIEA
GeneIl1f10Authority362077Mapping file id362077 NCBI fileEvidenceIEA
GeneIl1r1Authority25663Mapping file idENSRNOG00000014504 Ensembl fileEvidenceIEA
GeneIl1r2Authority117022Mapping file id117022 NCBI fileEvidenceIEA
GeneIl1rapAuthority25466Mapping file id25466 NCBI fileEvidenceIEA
GeneIl1rapl1Authority317553Mapping file id317553 NCBI fileEvidenceIEA
GeneIl1rl1Authority25556Mapping file id25556 NCBI fileEvidenceIEA
GeneIl1rl2Authority171106Mapping file id171106 NCBI fileEvidenceIEA
GeneIl1rnAuthority60582Mapping file id60582 NCBI fileEvidenceIEA
GeneIl2Authority116562Mapping file id116562 NCBI fileEvidenceIEA
GeneIl20Authority681112Mapping file id681112 NCBI fileEvidenceIEA
GeneIl20raAuthority308716Mapping file idENSRNOG00000012286 Ensembl fileEvidenceIEA
GeneIl21Authority365769Mapping file id365769 NCBI fileEvidenceIEA
GeneIl21rAuthority308977Mapping file idENSRNOG00000015773 Ensembl fileEvidenceIEA
GeneIl22Authority500836Mapping file id500836 NCBI fileEvidenceIEA
GeneIl22ra1Authority362629Mapping file id362629 NCBI fileEvidenceIEA
GeneIl22ra2Authority444986Mapping file id444986 NCBI fileEvidenceIEA
GeneIl23aAuthority155140Mapping file id155140 NCBI fileEvidenceIEA
GeneIl23rAuthority689932Mapping file id689932 NCBI fileEvidenceIEA
GeneIl24Authority170819Mapping file id170819 NCBI fileEvidenceIEA
GeneIl27Authority365368Mapping file id365368 NCBI fileEvidenceIEA
GeneIl2raAuthority25704Mapping file id25704 NCBI fileEvidenceIEA
GeneIl2rbAuthority25746Mapping file id25746 NCBI fileEvidenceIEA
GeneIl3Authority24495Mapping file idENSRNOG00000026786 Ensembl fileEvidenceIEA
GeneIl31raAuthority688622Mapping file id688622 NCBI fileEvidenceIEA

Evidence codes on this page: IEA, as the mapping file writes them; a row carrying two was written twice by the file, once under each. The mapping file id says which file placed the gene: an NCBI Gene id from NCBI2Reactome_All_Levels.txt, an Ensembl gene id from Ensembl2Reactome_All_Levels.txt. The two files can disagree about a code, so a row's codes are the one file's view. Measured by this site's build over this release on 2026-09-09: the two files disagree on none of the 64,140 rat pairs both place.

  • Reactome mapping files, the rat rows for this pathway · Reactome release 97 · read · Reactome downloads"NCBI2Reactome_All_Levels.txt" and "Ensembl2Reactome_All_Levels.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.

03The hierarchy

Parents and children in this release's hierarchy

Reactome's hierarchy is a graph rather than a tree: a pathway can sit under more than one parent, and the gene counts are each pathway's own placements at every level under it, so a parent's count is not the sum of its children's.

  • Reactome, the rat pathway list and hierarchy relationship file · Reactome release 97 · read · Reactome downloads"ReactomePathways.txt" and "ReactomePathwaysRelation.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.