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Order

Pathway Rat Rattus norvegicus

Read this first

Every rat pathway in Reactome is electronically inferred from the curated human one; Reactome's own sentence about that stands beside the record below.

Signaling by Receptor Tyrosine Kinases

R-RNO-9006934 in Reactome release 97: under Signal Transduction, with 409 genes placed in it by the mapping files and 14 child pathways in the hierarchy.

The same number in the other species

Reactome writes the mouse and rat events it infers from a human pathway under the human number with the species token. A door opens only where that species' own list in this release holds the id: R-HSA-9006934 (human), R-MMU-9006934 (mouse). Whether the event was inferred from this one is what the record says.

01The record

Reactome's own record of this pathway

What this tells you

The pathway list, the hierarchy and the genes on this page are read from the files Reactome publishes for Reactome release 97, built into this site on 2026-09-09: the pathway list, the hierarchy relationship file and the two gene mapping files. The record card is the one live read, Reactome's own record of this pathway.

Reactome's download page describes the mapping files: Mapping files link the source database identifier to the lowest level pathway diagram or subset of the pathway, all levels of the pathway hierarchy or database identifier to all reactions. [R13] The gene list here is the all-levels mapping of NCBI Gene ids, filled from the all-levels mapping of Ensembl ids where the NCBI file has no row for a gene; each row names which file it came from by the shape of its source id. Each row carries the evidence codes the file writes for it, as written and unranked, and both where the file writes both; no page of Reactome's documentation the survey read defines the codes, so this page does not expand them. A gene id the identity files do not name is kept as the source's own id with no door rather than turned into a symbol.

Every rat pathway in Reactome is inferred from the curated human one: We use the set of manually curated human reactions to electronically infer reactions in fourteen evolutionarily divergent eukaryotic species for which high-quality whole-genome sequence data are available, and hence a comprehensive and high-quality set of protein predictions exists. [R11] Reactome's own sentence about what that produces is printed beside the record: The electronically inferred reactions presented in Reactome are thus not data, but hypotheses useful to direct the design of confirmatory experiments. [R11]

On citing what a search finds, Reactome says: It should be remembered that while we strive to contain the most current and accurate data, Reactome should not be used in citations where other primary sources of information are available. [R12] The record card prints the literature Reactome attaches to a curated pathway for that reason. The data are public domain: All data in the Reactome database and files derived from that data are licensed under the Creative Commons Public Domain Dedication (CC0). User may copy, modify, and distribute these data, even for commercial purposes, without asking for permission. Attribution is encouraged but not required. [R10] The pathway illustrations are licensed apart, under CC BY 4.0, and none is shown here.

A gene on this list is one Reactome places in this pathway in this release, and that is all the row says: it does not say the gene is expressed in a tissue or associated with a disease, which are the other two explorers' questions, read from other sources. Reactome's papers of record are [R01] [R02].

  1. [R01] Ragueneau E, Gong C, Sinquin P, Sevilla C, Beavers D, Grentner A, et al. (2026). The Reactome Knowledgebase 2026. Nucleic Acids Research 54:D673-D681. PMID 41251150, doi 10.1093/nar/gkaf1223.
  2. [R02] Milacic M, Beavers D, Conley P, Gong C, Gillespie M, Griss J, et al. (2024). The Reactome Pathway Knowledgebase 2024. Nucleic Acids Research 52:D672-D678. PMID 37941124, doi 10.1093/nar/gkad1025.
  3. [R10] Reactome, reactome.org. License Agreement. https://reactome.org/license, read 2026-09-09.
  4. [R11] Reactome, reactome.org. Computationally inferred events. https://reactome.org/documentation/inferred-events, read 2026-09-09.
  5. [R12] Reactome, reactome.org. Citing us. https://reactome.org/cite, read 2026-09-09.
  6. [R13] Reactome, reactome.org. Download. https://reactome.org/download-data, read 2026-09-09.
Reading this pathway's record from Reactome (the pathway record).Still reading. A first read of a pathway can take a while; this page waits up to 35 seconds for it, and its scripts then bring in the panel, or a line saying what did not arrive.

02The genes

Genes Reactome places in this rat pathway

The mapping files place 409 genes in this rat pathway; showing 201 to 300, in pages of 100, sorted by symbol for reading. The order carries no ranking.

Genes Reactome places in this rat pathway, page 3 of 5
GeneKxd1Authority498606Mapping file idENSRNOG00000019971 Ensembl fileEvidenceIEA
GeneLama4Authority309816Mapping file id309816 NCBI fileEvidenceIEA
GeneLckAuthority313050Mapping file id313050 NCBI fileEvidenceIEA
GeneLrig1Authority312574Mapping file id312574 NCBI fileEvidenceIEA
GeneLynAuthority81515Mapping file id81515 NCBI fileEvidenceIEA
GeneMap2k1Authority170851Mapping file id170851 NCBI fileEvidenceIEA
GeneMap2k2Authority58960Mapping file id58960 NCBI fileEvidenceIEA
GeneMapk1Authority116590Mapping file id116590 NCBI fileEvidenceIEA
GeneMapk11Authority689314Mapping file idENSRNOG00000006984 Ensembl fileEvidenceIEA
GeneMapk12Authority60352Mapping file id60352 NCBI fileEvidenceIEA
GeneMapk13Authority29513Mapping file idENSRNOG00000000515 Ensembl fileEvidenceIEA
GeneMapk3Authority50689Mapping file id50689 NCBI fileEvidenceIEA
GeneMapk7Authority114509Mapping file idENSRNOG00000047907 Ensembl fileEvidenceIEA
GeneMapkap1Authority296648Mapping file id296648 NCBI fileEvidenceIEA
GeneMapkapk2Authority289014Mapping file id289014 NCBI fileEvidenceIEA
GeneMapkapk3Authority315994Mapping file id315994 NCBI fileEvidenceIEA
GeneMdkAuthority81517Mapping file id81517 NCBI fileEvidenceIEA
GeneMegf11Authority691517Mapping file id691517 NCBI fileEvidenceIEA
GeneMemo1Authority298787Mapping file id298787 NCBI fileEvidenceIEA
GeneMetAuthority24553Mapping file id24553 NCBI fileEvidenceIEA
GeneMknk1Authority500526Mapping file id500526 NCBI fileEvidenceIEA
GeneMlst8Authority64226Mapping file id64226 NCBI fileEvidenceIEA
GeneMmp9Authority81687Mapping file id81687 NCBI fileEvidenceIEA
GeneMst1Authority24566Mapping file idENSRNOG00000019680 Ensembl fileEvidenceIEA
GeneMst1rAuthority300999Mapping file idENSRNOG00000032618 Ensembl fileEvidenceIEA
GeneMtorAuthority56718Mapping file id56718 NCBI fileEvidenceIEA
GeneMuc20Authority303886Mapping file idENSRNOG00000001776 Ensembl fileEvidenceIEA
GeneNab2Authority314910Mapping file id314910 NCBI fileEvidenceIEA
GeneNcbp1Authority298075Mapping file id298075 NCBI fileEvidenceIEA
GeneNcbp2Authority689116Mapping file id689116 NCBI fileEvidenceIEA
GeneNcf1Authority114553Mapping file idENSRNOG00000001480 Ensembl fileEvidenceIEA
GeneNcf2Authority364018Mapping file idENSRNOG00000028016 Ensembl fileEvidenceIEA
GeneNcf4Authority500904Mapping file idENSRNOG00000006940 Ensembl fileEvidenceIEA
GeneNck1Authority300955Mapping file id300955 NCBI fileEvidenceIEA
GeneNck2Authority316369Mapping file id316369 NCBI fileEvidenceIEA
GeneNckap1Authority58823Mapping file id58823 NCBI fileEvidenceIEA
GeneNckap1lAuthority315348Mapping file id315348 NCBI fileEvidenceIEA
GeneNcstnAuthority289231Mapping file id289231 NCBI fileEvidenceIEA
GeneNedd4Authority25489Mapping file id25489 NCBI fileEvidenceIEA
GeneNgfAuthority310738Mapping file id310738 NCBI fileEvidenceIEA
GeneNos3Authority24600Mapping file id24600 NCBI fileEvidenceIEA
GeneNrasAuthority24605Mapping file id24605 NCBI fileEvidenceIEA
GeneNrg2Authority432361Mapping file id432361 NCBI fileEvidenceIEA
GeneNrg3Authority498596Mapping file id498596 NCBI fileEvidenceIEA
GeneNrp1Authority246331Mapping file id246331 NCBI fileEvidenceIEA
GeneNrp2Authority81527Mapping file id81527 NCBI fileEvidenceIEA
GeneNtf3Authority81737Mapping file id81737 NCBI fileEvidenceIEA
GeneNtf4Authority25730Mapping file id25730 NCBI fileEvidenceIEA
GeneNtrk1Authority59109Mapping file id59109 NCBI fileEvidenceIEA
GeneNtrk2Authority25054Mapping file id25054 NCBI fileEvidenceIEA
GeneNtrk3Authority29613Mapping file id29613 NCBI fileEvidenceIEA
GenePag1Authority64019Mapping file id64019 NCBI fileEvidenceIEA
GenePak1Authority29431Mapping file id29431 NCBI fileEvidenceIEA
GenePak2Authority29432Mapping file id29432 NCBI fileEvidenceIEA
GenePak3Authority29433Mapping file id29433 NCBI fileEvidenceIEA
GenePcsk5Authority116548Mapping file id116548 NCBI fileEvidenceIEA
GenePcsk6Authority25507Mapping file id25507 NCBI fileEvidenceIEA
GenePde3bAuthority29516Mapping file id29516 NCBI fileEvidenceIEA
GenePdgfaAuthority25266Mapping file id25266 NCBI fileEvidenceIEA
GenePdgfbAuthority24628Mapping file id24628 NCBI fileEvidenceIEA
GenePdgfcAuthority79429Mapping file id79429 NCBI fileEvidenceIEA
GenePdgfdAuthority66018Mapping file id66018 NCBI fileEvidenceIEA
GenePdgfraAuthority25267Mapping file id25267 NCBI fileEvidenceIEA
GenePdgfrbAuthority24629Mapping file id24629 NCBI fileEvidenceIEA
GenePdpk1Authority81745Mapping file id81745 NCBI fileEvidenceIEA
GenePgfAuthority94203Mapping file id94203 NCBI fileEvidenceIEA
GenePik3c3Authority65052Mapping file id65052 NCBI fileEvidenceIEA
GenePik3caAuthority170911Mapping file id170911 NCBI fileEvidenceIEA
GenePik3cbAuthority85243Mapping file id85243 NCBI fileEvidenceIEA
GenePik3r1Authority25513Mapping file id25513 NCBI fileEvidenceIEA
GenePik3r3Authority60664Mapping file id60664 NCBI fileEvidenceIEA
GenePik3r4Authority363131Mapping file id363131 NCBI fileEvidenceIEA
GenePlatAuthority25692Mapping file id25692 NCBI fileEvidenceIEA
GenePlcg1Authority25738Mapping file id25738 NCBI fileEvidenceIEA
GenePlgAuthority85253Mapping file id85253 NCBI fileEvidenceIEA
GenePolr2aAuthority363633Mapping file id363633 NCBI fileEvidenceIEA
GenePolr2bAuthority289561Mapping file id289561 NCBI fileEvidenceIEA
GenePolr2cAuthority361365Mapping file id361365 NCBI fileEvidenceIEA
GenePolr2dAuthority364834Mapping file idENSRNOG00000016231 Ensembl fileEvidenceIEA
GenePolr2eAuthority690966Mapping file id690966 NCBI fileEvidenceIEA
GenePolr2fAuthority83503Mapping file id83503 NCBI fileEvidenceIEA
GenePolr2gAuthority117017Mapping file id117017 NCBI fileEvidenceIEA
GenePolr2hAuthority498109Mapping file id498109 NCBI fileEvidenceIEA
GenePolr2h-ps1Authority287988Mapping file idENSRNOG00000032442 Ensembl fileEvidenceIEA
GenePolr2iAuthority292778Mapping file id292778 NCBI fileEvidenceIEA
GenePolr2jAuthority288588Mapping file id288588 NCBI fileEvidenceIEA
GenePpp2caAuthority24672Mapping file id24672 NCBI fileEvidenceIEA
GenePpp2cbAuthority24673Mapping file id24673 NCBI fileEvidenceIEA
GenePpp2r1aAuthority117281Mapping file id117281 NCBI fileEvidenceIEA
GenePpp2r1bAuthority315648Mapping file id315648 NCBI fileEvidenceIEA
GenePpp2r5dAuthority363193Mapping file id363193 NCBI fileEvidenceIEA
GenePrkacbAuthority293508Mapping file id293508 NCBI fileEvidenceIEA
GenePrkcaAuthority24680Mapping file id24680 NCBI fileEvidenceIEA
GenePrkcbAuthority25023Mapping file id25023 NCBI fileEvidenceIEA
GenePrkcdAuthority170538Mapping file id170538 NCBI fileEvidenceIEA
GenePrkceAuthority29340Mapping file id29340 NCBI fileEvidenceIEA
GenePrkczAuthority25522Mapping file id25522 NCBI fileEvidenceIEA
GenePrr5Authority315189Mapping file id315189 NCBI fileEvidenceIEA
GenePsen1Authority29192Mapping file id29192 NCBI fileEvidenceIEA
GenePsen2Authority81751Mapping file id81751 NCBI fileEvidenceIEA

Evidence codes on this page: IEA, as the mapping file writes them; a row carrying two was written twice by the file, once under each. The mapping file id says which file placed the gene: an NCBI Gene id from NCBI2Reactome_All_Levels.txt, an Ensembl gene id from Ensembl2Reactome_All_Levels.txt. The two files can disagree about a code, so a row's codes are the one file's view. Measured by this site's build over this release on 2026-09-09: the two files disagree on none of the 64,140 rat pairs both place.

  • Reactome mapping files, the rat rows for this pathway · Reactome release 97 · read · Reactome downloads"NCBI2Reactome_All_Levels.txt" and "Ensembl2Reactome_All_Levels.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.

03The hierarchy

Parents and children in this release's hierarchy

Reactome's hierarchy is a graph rather than a tree: a pathway can sit under more than one parent, and the gene counts are each pathway's own placements at every level under it, so a parent's count is not the sum of its children's.

  • Reactome, the rat pathway list and hierarchy relationship file · Reactome release 97 · read · Reactome downloads"ReactomePathways.txt" and "ReactomePathwaysRelation.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.