Pathway Rat Rattus norvegicus
Read this first
Signaling by Receptor Tyrosine Kinases
R-RNO-9006934 in Reactome release 97: under Signal Transduction, with 409 genes placed in it by the mapping files and 14 child pathways in the hierarchy.
The same number in the other species
Reactome writes the mouse and rat events it infers from a human pathway under the human number with the species token. A door opens only where that species' own list in this release holds the id: R-HSA-9006934 (human), R-MMU-9006934 (mouse). Whether the event was inferred from this one is what the record says.
01The record
Reactome's own record of this pathway
What this tells you
The pathway list, the hierarchy and the genes on this page are read from the files Reactome publishes for Reactome release 97, built into this site on 2026-09-09: the pathway list, the hierarchy relationship file and the two gene mapping files. The record card is the one live read, Reactome's own record of this pathway.
Reactome's download page describes the mapping files: Mapping files link the source database identifier to the lowest level pathway diagram or subset of the pathway, all levels of the pathway hierarchy or database identifier to all reactions.
[R13] The gene list here is the all-levels mapping of NCBI Gene ids, filled from the all-levels mapping of Ensembl ids where the NCBI file has no row for a gene; each row names which file it came from by the shape of its source id. Each row carries the evidence codes the file writes for it, as written and unranked, and both where the file writes both; no page of Reactome's documentation the survey read defines the codes, so this page does not expand them. A gene id the identity files do not name is kept as the source's own id with no door rather than turned into a symbol.
Every rat pathway in Reactome is inferred from the curated human one: We use the set of manually curated human reactions to electronically infer reactions in fourteen evolutionarily divergent eukaryotic species for which high-quality whole-genome sequence data are available, and hence a comprehensive and high-quality set of protein predictions exists.
[R11] Reactome's own sentence about what that produces is printed beside the record: The electronically inferred reactions presented in Reactome are thus not data, but hypotheses useful to direct the design of confirmatory experiments.
[R11]
On citing what a search finds, Reactome says: It should be remembered that while we strive to contain the most current and accurate data, Reactome should not be used in citations where other primary sources of information are available.
[R12] The record card prints the literature Reactome attaches to a curated pathway for that reason. The data are public domain: All data in the Reactome database and files derived from that data are licensed under the Creative Commons Public Domain Dedication (CC0). User may copy, modify, and distribute these data, even for commercial purposes, without asking for permission. Attribution is encouraged but not required.
[R10] The pathway illustrations are licensed apart, under CC BY 4.0, and none is shown here.
A gene on this list is one Reactome places in this pathway in this release, and that is all the row says: it does not say the gene is expressed in a tissue or associated with a disease, which are the other two explorers' questions, read from other sources. Reactome's papers of record are [R01] [R02].
- [R01] Ragueneau E, Gong C, Sinquin P, Sevilla C, Beavers D, Grentner A, et al. (2026). The Reactome Knowledgebase 2026. Nucleic Acids Research 54:D673-D681. PMID 41251150, doi 10.1093/nar/gkaf1223.
- [R02] Milacic M, Beavers D, Conley P, Gong C, Gillespie M, Griss J, et al. (2024). The Reactome Pathway Knowledgebase 2024. Nucleic Acids Research 52:D672-D678. PMID 37941124, doi 10.1093/nar/gkad1025.
- [R10] Reactome, reactome.org. License Agreement. https://reactome.org/license, read 2026-09-09.
- [R11] Reactome, reactome.org. Computationally inferred events. https://reactome.org/documentation/inferred-events, read 2026-09-09.
- [R12] Reactome, reactome.org. Citing us. https://reactome.org/cite, read 2026-09-09.
- [R13] Reactome, reactome.org. Download. https://reactome.org/download-data, read 2026-09-09.
02The genes
Genes Reactome places in this rat pathway
The mapping files place 409 genes in this rat pathway; showing 201 to 300, in pages of 100, sorted by symbol for reading. The order carries no ranking.
| Gene | Authority id | Mapping file id | Evidence codes |
|---|---|---|---|
| GeneKxd1 | Authority498606 | Mapping file idENSRNOG00000019971 Ensembl file | EvidenceIEA |
| GeneLama4 | Authority309816 | Mapping file id309816 NCBI file | EvidenceIEA |
| GeneLck | Authority313050 | Mapping file id313050 NCBI file | EvidenceIEA |
| GeneLrig1 | Authority312574 | Mapping file id312574 NCBI file | EvidenceIEA |
| GeneLyn | Authority81515 | Mapping file id81515 NCBI file | EvidenceIEA |
| GeneMap2k1 | Authority170851 | Mapping file id170851 NCBI file | EvidenceIEA |
| GeneMap2k2 | Authority58960 | Mapping file id58960 NCBI file | EvidenceIEA |
| GeneMapk1 | Authority116590 | Mapping file id116590 NCBI file | EvidenceIEA |
| GeneMapk11 | Authority689314 | Mapping file idENSRNOG00000006984 Ensembl file | EvidenceIEA |
| GeneMapk12 | Authority60352 | Mapping file id60352 NCBI file | EvidenceIEA |
| GeneMapk13 | Authority29513 | Mapping file idENSRNOG00000000515 Ensembl file | EvidenceIEA |
| GeneMapk3 | Authority50689 | Mapping file id50689 NCBI file | EvidenceIEA |
| GeneMapk7 | Authority114509 | Mapping file idENSRNOG00000047907 Ensembl file | EvidenceIEA |
| GeneMapkap1 | Authority296648 | Mapping file id296648 NCBI file | EvidenceIEA |
| GeneMapkapk2 | Authority289014 | Mapping file id289014 NCBI file | EvidenceIEA |
| GeneMapkapk3 | Authority315994 | Mapping file id315994 NCBI file | EvidenceIEA |
| GeneMdk | Authority81517 | Mapping file id81517 NCBI file | EvidenceIEA |
| GeneMegf11 | Authority691517 | Mapping file id691517 NCBI file | EvidenceIEA |
| GeneMemo1 | Authority298787 | Mapping file id298787 NCBI file | EvidenceIEA |
| GeneMet | Authority24553 | Mapping file id24553 NCBI file | EvidenceIEA |
| GeneMknk1 | Authority500526 | Mapping file id500526 NCBI file | EvidenceIEA |
| GeneMlst8 | Authority64226 | Mapping file id64226 NCBI file | EvidenceIEA |
| GeneMmp9 | Authority81687 | Mapping file id81687 NCBI file | EvidenceIEA |
| GeneMst1 | Authority24566 | Mapping file idENSRNOG00000019680 Ensembl file | EvidenceIEA |
| GeneMst1r | Authority300999 | Mapping file idENSRNOG00000032618 Ensembl file | EvidenceIEA |
| GeneMtor | Authority56718 | Mapping file id56718 NCBI file | EvidenceIEA |
| GeneMuc20 | Authority303886 | Mapping file idENSRNOG00000001776 Ensembl file | EvidenceIEA |
| GeneNab2 | Authority314910 | Mapping file id314910 NCBI file | EvidenceIEA |
| GeneNcbp1 | Authority298075 | Mapping file id298075 NCBI file | EvidenceIEA |
| GeneNcbp2 | Authority689116 | Mapping file id689116 NCBI file | EvidenceIEA |
| GeneNcf1 | Authority114553 | Mapping file idENSRNOG00000001480 Ensembl file | EvidenceIEA |
| GeneNcf2 | Authority364018 | Mapping file idENSRNOG00000028016 Ensembl file | EvidenceIEA |
| GeneNcf4 | Authority500904 | Mapping file idENSRNOG00000006940 Ensembl file | EvidenceIEA |
| GeneNck1 | Authority300955 | Mapping file id300955 NCBI file | EvidenceIEA |
| GeneNck2 | Authority316369 | Mapping file id316369 NCBI file | EvidenceIEA |
| GeneNckap1 | Authority58823 | Mapping file id58823 NCBI file | EvidenceIEA |
| GeneNckap1l | Authority315348 | Mapping file id315348 NCBI file | EvidenceIEA |
| GeneNcstn | Authority289231 | Mapping file id289231 NCBI file | EvidenceIEA |
| GeneNedd4 | Authority25489 | Mapping file id25489 NCBI file | EvidenceIEA |
| GeneNgf | Authority310738 | Mapping file id310738 NCBI file | EvidenceIEA |
| GeneNos3 | Authority24600 | Mapping file id24600 NCBI file | EvidenceIEA |
| GeneNras | Authority24605 | Mapping file id24605 NCBI file | EvidenceIEA |
| GeneNrg2 | Authority432361 | Mapping file id432361 NCBI file | EvidenceIEA |
| GeneNrg3 | Authority498596 | Mapping file id498596 NCBI file | EvidenceIEA |
| GeneNrp1 | Authority246331 | Mapping file id246331 NCBI file | EvidenceIEA |
| GeneNrp2 | Authority81527 | Mapping file id81527 NCBI file | EvidenceIEA |
| GeneNtf3 | Authority81737 | Mapping file id81737 NCBI file | EvidenceIEA |
| GeneNtf4 | Authority25730 | Mapping file id25730 NCBI file | EvidenceIEA |
| GeneNtrk1 | Authority59109 | Mapping file id59109 NCBI file | EvidenceIEA |
| GeneNtrk2 | Authority25054 | Mapping file id25054 NCBI file | EvidenceIEA |
| GeneNtrk3 | Authority29613 | Mapping file id29613 NCBI file | EvidenceIEA |
| GenePag1 | Authority64019 | Mapping file id64019 NCBI file | EvidenceIEA |
| GenePak1 | Authority29431 | Mapping file id29431 NCBI file | EvidenceIEA |
| GenePak2 | Authority29432 | Mapping file id29432 NCBI file | EvidenceIEA |
| GenePak3 | Authority29433 | Mapping file id29433 NCBI file | EvidenceIEA |
| GenePcsk5 | Authority116548 | Mapping file id116548 NCBI file | EvidenceIEA |
| GenePcsk6 | Authority25507 | Mapping file id25507 NCBI file | EvidenceIEA |
| GenePde3b | Authority29516 | Mapping file id29516 NCBI file | EvidenceIEA |
| GenePdgfa | Authority25266 | Mapping file id25266 NCBI file | EvidenceIEA |
| GenePdgfb | Authority24628 | Mapping file id24628 NCBI file | EvidenceIEA |
| GenePdgfc | Authority79429 | Mapping file id79429 NCBI file | EvidenceIEA |
| GenePdgfd | Authority66018 | Mapping file id66018 NCBI file | EvidenceIEA |
| GenePdgfra | Authority25267 | Mapping file id25267 NCBI file | EvidenceIEA |
| GenePdgfrb | Authority24629 | Mapping file id24629 NCBI file | EvidenceIEA |
| GenePdpk1 | Authority81745 | Mapping file id81745 NCBI file | EvidenceIEA |
| GenePgf | Authority94203 | Mapping file id94203 NCBI file | EvidenceIEA |
| GenePik3c3 | Authority65052 | Mapping file id65052 NCBI file | EvidenceIEA |
| GenePik3ca | Authority170911 | Mapping file id170911 NCBI file | EvidenceIEA |
| GenePik3cb | Authority85243 | Mapping file id85243 NCBI file | EvidenceIEA |
| GenePik3r1 | Authority25513 | Mapping file id25513 NCBI file | EvidenceIEA |
| GenePik3r3 | Authority60664 | Mapping file id60664 NCBI file | EvidenceIEA |
| GenePik3r4 | Authority363131 | Mapping file id363131 NCBI file | EvidenceIEA |
| GenePlat | Authority25692 | Mapping file id25692 NCBI file | EvidenceIEA |
| GenePlcg1 | Authority25738 | Mapping file id25738 NCBI file | EvidenceIEA |
| GenePlg | Authority85253 | Mapping file id85253 NCBI file | EvidenceIEA |
| GenePolr2a | Authority363633 | Mapping file id363633 NCBI file | EvidenceIEA |
| GenePolr2b | Authority289561 | Mapping file id289561 NCBI file | EvidenceIEA |
| GenePolr2c | Authority361365 | Mapping file id361365 NCBI file | EvidenceIEA |
| GenePolr2d | Authority364834 | Mapping file idENSRNOG00000016231 Ensembl file | EvidenceIEA |
| GenePolr2e | Authority690966 | Mapping file id690966 NCBI file | EvidenceIEA |
| GenePolr2f | Authority83503 | Mapping file id83503 NCBI file | EvidenceIEA |
| GenePolr2g | Authority117017 | Mapping file id117017 NCBI file | EvidenceIEA |
| GenePolr2h | Authority498109 | Mapping file id498109 NCBI file | EvidenceIEA |
| GenePolr2h-ps1 | Authority287988 | Mapping file idENSRNOG00000032442 Ensembl file | EvidenceIEA |
| GenePolr2i | Authority292778 | Mapping file id292778 NCBI file | EvidenceIEA |
| GenePolr2j | Authority288588 | Mapping file id288588 NCBI file | EvidenceIEA |
| GenePpp2ca | Authority24672 | Mapping file id24672 NCBI file | EvidenceIEA |
| GenePpp2cb | Authority24673 | Mapping file id24673 NCBI file | EvidenceIEA |
| GenePpp2r1a | Authority117281 | Mapping file id117281 NCBI file | EvidenceIEA |
| GenePpp2r1b | Authority315648 | Mapping file id315648 NCBI file | EvidenceIEA |
| GenePpp2r5d | Authority363193 | Mapping file id363193 NCBI file | EvidenceIEA |
| GenePrkacb | Authority293508 | Mapping file id293508 NCBI file | EvidenceIEA |
| GenePrkca | Authority24680 | Mapping file id24680 NCBI file | EvidenceIEA |
| GenePrkcb | Authority25023 | Mapping file id25023 NCBI file | EvidenceIEA |
| GenePrkcd | Authority170538 | Mapping file id170538 NCBI file | EvidenceIEA |
| GenePrkce | Authority29340 | Mapping file id29340 NCBI file | EvidenceIEA |
| GenePrkcz | Authority25522 | Mapping file id25522 NCBI file | EvidenceIEA |
| GenePrr5 | Authority315189 | Mapping file id315189 NCBI file | EvidenceIEA |
| GenePsen1 | Authority29192 | Mapping file id29192 NCBI file | EvidenceIEA |
| GenePsen2 | Authority81751 | Mapping file id81751 NCBI file | EvidenceIEA |
Evidence codes on this page: IEA, as the mapping file writes them; a row carrying two was written twice by the file, once under each. The mapping file id says which file placed the gene: an NCBI Gene id from NCBI2Reactome_All_Levels.txt, an Ensembl gene id from Ensembl2Reactome_All_Levels.txt. The two files can disagree about a code, so a row's codes are the one file's view. Measured by this site's build over this release on 2026-09-09: the two files disagree on none of the 64,140 rat pairs both place.
- Reactome mapping files, the rat rows for this pathway · Reactome release 97 · read · Reactome downloads"NCBI2Reactome_All_Levels.txt" and "Ensembl2Reactome_All_Levels.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.
03The hierarchy
Parents and children in this release's hierarchy
Children
- Signaling by ALKR-RNO-20155619 genes
- Signaling by EGFRR-RNO-17792949 genes
- Signaling by ERBB2R-RNO-122798645 genes
- Signaling by ERBB4R-RNO-123639437 genes
- Signaling by FGFRR-RNO-19023687 genes
- Signaling by Insulin receptorR-RNO-7475277 genes
- Signaling by LTKR-RNO-984266310 genes
- Signaling by METR-RNO-680683469 genes
- Signaling by MST1R-RNO-88524055 genes
- Signaling by NTRKsR-RNO-16652075 genes
- Signaling by PDGFR-RNO-18679746 genes
- Signaling by SCF-KITR-RNO-143355739 genes
- Signaling by Type 1 Insulin-like Growth Factor 1 Receptor (IGF1R)R-RNO-240419248 genes
- Signaling by VEGFR-RNO-19413897 genes
Reactome's hierarchy is a graph rather than a tree: a pathway can sit under more than one parent, and the gene counts are each pathway's own placements at every level under it, so a parent's count is not the sum of its children's.
- Reactome, the rat pathway list and hierarchy relationship file · Reactome release 97 · read · Reactome downloads"ReactomePathways.txt" and "ReactomePathwaysRelation.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.