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Order

Pathway Rat Rattus norvegicus

Read this first

Every rat pathway in Reactome is electronically inferred from the curated human one; Reactome's own sentence about that stands beside the record below.

Signaling by Receptor Tyrosine Kinases

R-RNO-9006934 in Reactome release 97: under Signal Transduction, with 409 genes placed in it by the mapping files and 14 child pathways in the hierarchy.

The same number in the other species

Reactome writes the mouse and rat events it infers from a human pathway under the human number with the species token. A door opens only where that species' own list in this release holds the id: R-HSA-9006934 (human), R-MMU-9006934 (mouse). Whether the event was inferred from this one is what the record says.

01The record

Reactome's own record of this pathway

What this tells you

The pathway list, the hierarchy and the genes on this page are read from the files Reactome publishes for Reactome release 97, built into this site on 2026-09-09: the pathway list, the hierarchy relationship file and the two gene mapping files. The record card is the one live read, Reactome's own record of this pathway.

Reactome's download page describes the mapping files: Mapping files link the source database identifier to the lowest level pathway diagram or subset of the pathway, all levels of the pathway hierarchy or database identifier to all reactions. [R13] The gene list here is the all-levels mapping of NCBI Gene ids, filled from the all-levels mapping of Ensembl ids where the NCBI file has no row for a gene; each row names which file it came from by the shape of its source id. Each row carries the evidence codes the file writes for it, as written and unranked, and both where the file writes both; no page of Reactome's documentation the survey read defines the codes, so this page does not expand them. A gene id the identity files do not name is kept as the source's own id with no door rather than turned into a symbol.

Every rat pathway in Reactome is inferred from the curated human one: We use the set of manually curated human reactions to electronically infer reactions in fourteen evolutionarily divergent eukaryotic species for which high-quality whole-genome sequence data are available, and hence a comprehensive and high-quality set of protein predictions exists. [R11] Reactome's own sentence about what that produces is printed beside the record: The electronically inferred reactions presented in Reactome are thus not data, but hypotheses useful to direct the design of confirmatory experiments. [R11]

On citing what a search finds, Reactome says: It should be remembered that while we strive to contain the most current and accurate data, Reactome should not be used in citations where other primary sources of information are available. [R12] The record card prints the literature Reactome attaches to a curated pathway for that reason. The data are public domain: All data in the Reactome database and files derived from that data are licensed under the Creative Commons Public Domain Dedication (CC0). User may copy, modify, and distribute these data, even for commercial purposes, without asking for permission. Attribution is encouraged but not required. [R10] The pathway illustrations are licensed apart, under CC BY 4.0, and none is shown here.

A gene on this list is one Reactome places in this pathway in this release, and that is all the row says: it does not say the gene is expressed in a tissue or associated with a disease, which are the other two explorers' questions, read from other sources. Reactome's papers of record are [R01] [R02].

  1. [R01] Ragueneau E, Gong C, Sinquin P, Sevilla C, Beavers D, Grentner A, et al. (2026). The Reactome Knowledgebase 2026. Nucleic Acids Research 54:D673-D681. PMID 41251150, doi 10.1093/nar/gkaf1223.
  2. [R02] Milacic M, Beavers D, Conley P, Gong C, Gillespie M, Griss J, et al. (2024). The Reactome Pathway Knowledgebase 2024. Nucleic Acids Research 52:D672-D678. PMID 37941124, doi 10.1093/nar/gkad1025.
  3. [R10] Reactome, reactome.org. License Agreement. https://reactome.org/license, read 2026-09-09.
  4. [R11] Reactome, reactome.org. Computationally inferred events. https://reactome.org/documentation/inferred-events, read 2026-09-09.
  5. [R12] Reactome, reactome.org. Citing us. https://reactome.org/cite, read 2026-09-09.
  6. [R13] Reactome, reactome.org. Download. https://reactome.org/download-data, read 2026-09-09.
Reading this pathway's record from Reactome (the pathway record).Still reading. A first read of a pathway can take a while; this page waits up to 35 seconds for it, and its scripts then bring in the panel, or a line saying what did not arrive.

02The genes

Genes Reactome places in this rat pathway

The mapping files place 409 genes in this rat pathway; showing 301 to 400, in pages of 100, sorted by symbol for reading. The order carries no ranking.

Genes Reactome places in this rat pathway, page 4 of 5
GenePsenenAuthority292788Mapping file id292788 NCBI fileEvidenceIEA
GenePtbp1Authority29497Mapping file id29497 NCBI fileEvidenceIEA
GenePtk2Authority25614Mapping file id25614 NCBI fileEvidenceIEA
GenePtk2bAuthority50646Mapping file id50646 NCBI fileEvidenceIEA
GenePtk6Authority366275Mapping file id366275 NCBI fileEvidenceIEA
GenePtk7Authority301242Mapping file idENSRNOG00000039976 Ensembl fileEvidenceIEA
GenePtnAuthority24924Mapping file id24924 NCBI fileEvidenceIEA
GenePtpn1Authority24697Mapping file id24697 NCBI fileEvidenceIEA
GenePtpn11Authority25622Mapping file id25622 NCBI fileEvidenceIEA
GenePtpn12Authority117255Mapping file id117255 NCBI fileEvidenceIEA
GenePtpn18Authority301333Mapping file idENSRNOG00000013415 Ensembl fileEvidenceIEA
GenePtpn2Authority117063Mapping file id117063 NCBI fileEvidenceIEA
GenePtpn3Authority362524Mapping file idENSRNOG00000011425 Ensembl fileEvidenceIEA
GenePtpn6Authority116689Mapping file id116689 NCBI fileEvidenceIEA
GenePtprfAuthority360406Mapping file id360406 NCBI fileEvidenceIEA
GenePtprjAuthority29645Mapping file idENSRNOG00000034025 Ensembl fileEvidenceIEA
GenePtpruAuthority116680Mapping file idENSRNOG00000013515 Ensembl fileEvidenceIEA
GenePtprz1Authority25613Mapping file id25613 NCBI fileEvidenceIEA
GenePxnAuthority360820Mapping file id360820 NCBI fileEvidenceIEA
GeneRab4aAuthority25532Mapping file id25532 NCBI fileEvidenceIEA
GeneRab4bAuthority50866Mapping file id50866 NCBI fileEvidenceIEA
GeneRac1Authority363875Mapping file id363875 NCBI fileEvidenceIEA
GeneRalgdsAuthority29622Mapping file id29622 NCBI fileEvidenceIEA
GeneRanbp10Authority361396Mapping file id361396 NCBI fileEvidenceIEA
GeneRanbp9Authority364686Mapping file id364686 NCBI fileEvidenceIEA
GeneRap1aAuthority295347Mapping file id295347 NCBI fileEvidenceIEA
GeneRap1bAuthority171337Mapping file id171337 NCBI fileEvidenceIEA
GeneRapgef1Authority63881Mapping file idENSRNOG00000014316 Ensembl fileEvidenceIEA
GeneRasa1Authority25676Mapping file id25676 NCBI fileEvidenceIEA
GeneRbfox2Authority362950Mapping file id362950 NCBI fileEvidenceIEA
GeneRbm4Authority293663Mapping file idENSRNOG00000050741 Ensembl fileEvidenceIEA
GeneRhoaAuthority117273Mapping file id117273 NCBI fileEvidenceIEA
GeneRictorAuthority310131Mapping file id310131 NCBI fileEvidenceIEA
GeneRnf41Authority362814Mapping file id362814 NCBI fileEvidenceIEA
GeneRock1Authority81762Mapping file idENSRNOG00000031092 Ensembl fileEvidenceIEA
GeneRock2Authority25537Mapping file id25537 NCBI fileEvidenceIEA
GeneRps27aAuthority100912032Mapping file id100912032 NCBI fileEvidenceIEA
GeneRps6ka1Authority81771Mapping file id81771 NCBI fileEvidenceIEA
GeneRps6ka2Authority117269Mapping file id117269 NCBI fileEvidenceIEA
GeneRps6ka3Authority501560Mapping file id501560 NCBI fileEvidenceIEA
GeneRps6ka5Authority314384Mapping file idENSRNOG00000004362 Ensembl fileEvidenceIEA
GeneSack1aAuthority500873Mapping file id500873 NCBI fileEvidenceIEA
GeneSack1bAuthority315829Mapping file id315829 NCBI fileEvidenceIEA
GeneSack1dAuthority311598Mapping file id311598 NCBI fileEvidenceIEA
GeneSgk1Authority29517Mapping file idENSRNOG00000011815 Ensembl fileEvidenceIEA
GeneSh2b2Authority114203Mapping file id114203 NCBI fileEvidenceIEA
GeneSh2d2aAuthority310688Mapping file id310688 NCBI fileEvidenceIEA
GeneSh3gl1Authority81922Mapping file id81922 NCBI fileEvidenceIEA
GeneSh3gl2Authority116743Mapping file id116743 NCBI fileEvidenceIEA
GeneSh3gl3Authority81921Mapping file id81921 NCBI fileEvidenceIEA
GeneSh3kbp1Authority84357Mapping file id84357 NCBI fileEvidenceIEA
GeneShbAuthority362513Mapping file id362513 NCBI fileEvidenceIEA
GeneShc1Authority85385Mapping file id85385 NCBI fileEvidenceIEA
GeneShc2Authority314612Mapping file id314612 NCBI fileEvidenceIEA
GeneSos1Authority313845Mapping file id313845 NCBI fileEvidenceIEA
GeneSphk1Authority170897Mapping file id170897 NCBI fileEvidenceIEA
GeneSpint1Authority311331Mapping file id311331 NCBI fileEvidenceIEA
GeneSpint2Authority292770Mapping file id292770 NCBI fileEvidenceIEA
GeneSpp1Authority25353Mapping file id25353 NCBI fileEvidenceIEA
GeneSpred1Authority296072Mapping file id296072 NCBI fileEvidenceIEA
GeneSpred2Authority305539Mapping file id305539 NCBI fileEvidenceIEA
GeneSpry1Authority294981Mapping file id294981 NCBI fileEvidenceIEA
GeneSpry2Authority306141Mapping file id306141 NCBI fileEvidenceIEA
GeneSrcAuthority83805Mapping file id83805 NCBI fileEvidenceIEA
GeneSrfAuthority501099Mapping file id501099 NCBI fileEvidenceIEA
GeneStamAuthority498798Mapping file id498798 NCBI fileEvidenceIEA
GeneStam2Authority311030Mapping file id311030 NCBI fileEvidenceIEA
GeneStat1Authority25124Mapping file idENSRNOG00000014079 Ensembl fileEvidenceIEA
GeneStat3Authority25125Mapping file id25125 NCBI fileEvidenceIEA
GeneStat5aAuthority24918Mapping file id24918 NCBI fileEvidenceIEA
GeneStat5bAuthority25126Mapping file id25126 NCBI fileEvidenceIEA
GeneStat6Authority362896Mapping file idENSRNOG00000025023 Ensembl fileEvidenceIEA
GeneStt3aAuthority500972Mapping file idENSRNOG00000031896 Ensembl fileEvidenceIEA
GeneStub1Authority287155Mapping file id287155 NCBI fileEvidenceIEA
GeneTcirg1Authority293650Mapping file idENSRNOG00000017220 Ensembl fileEvidenceIEA
GeneTecAuthority84492Mapping file id84492 NCBI fileEvidenceIEA
GeneTgfaAuthority24827Mapping file id24827 NCBI fileEvidenceIEA
GeneTgfbr3Authority29610Mapping file id29610 NCBI fileEvidenceIEA
GeneThbs1Authority445442Mapping file id445442 NCBI fileEvidenceIEA
GeneThbs2Authority292406Mapping file id292406 NCBI fileEvidenceIEA
GeneThbs3Authority681309Mapping file idENSRNOG00000059903 Ensembl fileEvidenceIEA
GeneThbs4Authority29220Mapping file idENSRNOG00000012471 Ensembl fileEvidenceIEA
GeneThem4Authority361992Mapping file id361992 NCBI fileEvidenceIEA
GeneTia1Authority312510Mapping file idENSRNOG00000016813 Ensembl fileEvidenceIEA
GeneTial1Authority361655Mapping file id361655 NCBI fileEvidenceIEA
GeneTlr9Authority338457Mapping file idENSRNOG00000048161 Ensembl fileEvidenceIEA
GeneTnk2Authority303882Mapping file id303882 NCBI fileEvidenceIEA
GeneTns3Authority360980Mapping file idENSRNOG00000025695 Ensembl fileEvidenceIEA
GeneTns4Authority303517Mapping file id303517 NCBI fileEvidenceIEA
GeneTrib3Authority246273Mapping file id246273 NCBI fileEvidenceIEA
GeneUba52Authority64156Mapping file id64156 NCBI fileEvidenceIEA
GeneUbbAuthority192255Mapping file id192255 NCBI fileEvidenceIEA
GeneUbcAuthority50522Mapping file id50522 NCBI fileEvidenceIEA
GeneUsp8Authority296121Mapping file id296121 NCBI fileEvidenceIEA
GeneVav1Authority25156Mapping file idENSRNOG00000050430 Ensembl fileEvidenceIEA
GeneVav2Authority296603Mapping file idENSRNOG00000007422 Ensembl fileEvidenceIEA
GeneVav3Authority295378Mapping file id295378 NCBI fileEvidenceIEA
GeneVegfaAuthority83785Mapping file id83785 NCBI fileEvidenceIEA
GeneVegfbAuthority89811Mapping file id89811 NCBI fileEvidenceIEA
GeneVegfcAuthority114111Mapping file id114111 NCBI fileEvidenceIEA

Evidence codes on this page: IEA, as the mapping file writes them; a row carrying two was written twice by the file, once under each. The mapping file id says which file placed the gene: an NCBI Gene id from NCBI2Reactome_All_Levels.txt, an Ensembl gene id from Ensembl2Reactome_All_Levels.txt. The two files can disagree about a code, so a row's codes are the one file's view. Measured by this site's build over this release on 2026-09-09: the two files disagree on none of the 64,140 rat pairs both place.

  • Reactome mapping files, the rat rows for this pathway · Reactome release 97 · read · Reactome downloads"NCBI2Reactome_All_Levels.txt" and "Ensembl2Reactome_All_Levels.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.

03The hierarchy

Parents and children in this release's hierarchy

Reactome's hierarchy is a graph rather than a tree: a pathway can sit under more than one parent, and the gene counts are each pathway's own placements at every level under it, so a parent's count is not the sum of its children's.

  • Reactome, the rat pathway list and hierarchy relationship file · Reactome release 97 · read · Reactome downloads"ReactomePathways.txt" and "ReactomePathwaysRelation.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.