Pathway Rat Rattus norvegicus
Read this first
Signaling by Receptor Tyrosine Kinases
R-RNO-9006934 in Reactome release 97: under Signal Transduction, with 409 genes placed in it by the mapping files and 14 child pathways in the hierarchy.
The same number in the other species
Reactome writes the mouse and rat events it infers from a human pathway under the human number with the species token. A door opens only where that species' own list in this release holds the id: R-HSA-9006934 (human), R-MMU-9006934 (mouse). Whether the event was inferred from this one is what the record says.
01The record
Reactome's own record of this pathway
What this tells you
The pathway list, the hierarchy and the genes on this page are read from the files Reactome publishes for Reactome release 97, built into this site on 2026-09-09: the pathway list, the hierarchy relationship file and the two gene mapping files. The record card is the one live read, Reactome's own record of this pathway.
Reactome's download page describes the mapping files: Mapping files link the source database identifier to the lowest level pathway diagram or subset of the pathway, all levels of the pathway hierarchy or database identifier to all reactions.
[R13] The gene list here is the all-levels mapping of NCBI Gene ids, filled from the all-levels mapping of Ensembl ids where the NCBI file has no row for a gene; each row names which file it came from by the shape of its source id. Each row carries the evidence codes the file writes for it, as written and unranked, and both where the file writes both; no page of Reactome's documentation the survey read defines the codes, so this page does not expand them. A gene id the identity files do not name is kept as the source's own id with no door rather than turned into a symbol.
Every rat pathway in Reactome is inferred from the curated human one: We use the set of manually curated human reactions to electronically infer reactions in fourteen evolutionarily divergent eukaryotic species for which high-quality whole-genome sequence data are available, and hence a comprehensive and high-quality set of protein predictions exists.
[R11] Reactome's own sentence about what that produces is printed beside the record: The electronically inferred reactions presented in Reactome are thus not data, but hypotheses useful to direct the design of confirmatory experiments.
[R11]
On citing what a search finds, Reactome says: It should be remembered that while we strive to contain the most current and accurate data, Reactome should not be used in citations where other primary sources of information are available.
[R12] The record card prints the literature Reactome attaches to a curated pathway for that reason. The data are public domain: All data in the Reactome database and files derived from that data are licensed under the Creative Commons Public Domain Dedication (CC0). User may copy, modify, and distribute these data, even for commercial purposes, without asking for permission. Attribution is encouraged but not required.
[R10] The pathway illustrations are licensed apart, under CC BY 4.0, and none is shown here.
A gene on this list is one Reactome places in this pathway in this release, and that is all the row says: it does not say the gene is expressed in a tissue or associated with a disease, which are the other two explorers' questions, read from other sources. Reactome's papers of record are [R01] [R02].
- [R01] Ragueneau E, Gong C, Sinquin P, Sevilla C, Beavers D, Grentner A, et al. (2026). The Reactome Knowledgebase 2026. Nucleic Acids Research 54:D673-D681. PMID 41251150, doi 10.1093/nar/gkaf1223.
- [R02] Milacic M, Beavers D, Conley P, Gong C, Gillespie M, Griss J, et al. (2024). The Reactome Pathway Knowledgebase 2024. Nucleic Acids Research 52:D672-D678. PMID 37941124, doi 10.1093/nar/gkad1025.
- [R10] Reactome, reactome.org. License Agreement. https://reactome.org/license, read 2026-09-09.
- [R11] Reactome, reactome.org. Computationally inferred events. https://reactome.org/documentation/inferred-events, read 2026-09-09.
- [R12] Reactome, reactome.org. Citing us. https://reactome.org/cite, read 2026-09-09.
- [R13] Reactome, reactome.org. Download. https://reactome.org/download-data, read 2026-09-09.
02The genes
Genes Reactome places in this rat pathway
The mapping files place 409 genes in this rat pathway; showing 301 to 400, in pages of 100, sorted by symbol for reading. The order carries no ranking.
| Gene | Authority id | Mapping file id | Evidence codes |
|---|---|---|---|
| GenePsenen | Authority292788 | Mapping file id292788 NCBI file | EvidenceIEA |
| GenePtbp1 | Authority29497 | Mapping file id29497 NCBI file | EvidenceIEA |
| GenePtk2 | Authority25614 | Mapping file id25614 NCBI file | EvidenceIEA |
| GenePtk2b | Authority50646 | Mapping file id50646 NCBI file | EvidenceIEA |
| GenePtk6 | Authority366275 | Mapping file id366275 NCBI file | EvidenceIEA |
| GenePtk7 | Authority301242 | Mapping file idENSRNOG00000039976 Ensembl file | EvidenceIEA |
| GenePtn | Authority24924 | Mapping file id24924 NCBI file | EvidenceIEA |
| GenePtpn1 | Authority24697 | Mapping file id24697 NCBI file | EvidenceIEA |
| GenePtpn11 | Authority25622 | Mapping file id25622 NCBI file | EvidenceIEA |
| GenePtpn12 | Authority117255 | Mapping file id117255 NCBI file | EvidenceIEA |
| GenePtpn18 | Authority301333 | Mapping file idENSRNOG00000013415 Ensembl file | EvidenceIEA |
| GenePtpn2 | Authority117063 | Mapping file id117063 NCBI file | EvidenceIEA |
| GenePtpn3 | Authority362524 | Mapping file idENSRNOG00000011425 Ensembl file | EvidenceIEA |
| GenePtpn6 | Authority116689 | Mapping file id116689 NCBI file | EvidenceIEA |
| GenePtprf | Authority360406 | Mapping file id360406 NCBI file | EvidenceIEA |
| GenePtprj | Authority29645 | Mapping file idENSRNOG00000034025 Ensembl file | EvidenceIEA |
| GenePtpru | Authority116680 | Mapping file idENSRNOG00000013515 Ensembl file | EvidenceIEA |
| GenePtprz1 | Authority25613 | Mapping file id25613 NCBI file | EvidenceIEA |
| GenePxn | Authority360820 | Mapping file id360820 NCBI file | EvidenceIEA |
| GeneRab4a | Authority25532 | Mapping file id25532 NCBI file | EvidenceIEA |
| GeneRab4b | Authority50866 | Mapping file id50866 NCBI file | EvidenceIEA |
| GeneRac1 | Authority363875 | Mapping file id363875 NCBI file | EvidenceIEA |
| GeneRalgds | Authority29622 | Mapping file id29622 NCBI file | EvidenceIEA |
| GeneRanbp10 | Authority361396 | Mapping file id361396 NCBI file | EvidenceIEA |
| GeneRanbp9 | Authority364686 | Mapping file id364686 NCBI file | EvidenceIEA |
| GeneRap1a | Authority295347 | Mapping file id295347 NCBI file | EvidenceIEA |
| GeneRap1b | Authority171337 | Mapping file id171337 NCBI file | EvidenceIEA |
| GeneRapgef1 | Authority63881 | Mapping file idENSRNOG00000014316 Ensembl file | EvidenceIEA |
| GeneRasa1 | Authority25676 | Mapping file id25676 NCBI file | EvidenceIEA |
| GeneRbfox2 | Authority362950 | Mapping file id362950 NCBI file | EvidenceIEA |
| GeneRbm4 | Authority293663 | Mapping file idENSRNOG00000050741 Ensembl file | EvidenceIEA |
| GeneRhoa | Authority117273 | Mapping file id117273 NCBI file | EvidenceIEA |
| GeneRictor | Authority310131 | Mapping file id310131 NCBI file | EvidenceIEA |
| GeneRnf41 | Authority362814 | Mapping file id362814 NCBI file | EvidenceIEA |
| GeneRock1 | Authority81762 | Mapping file idENSRNOG00000031092 Ensembl file | EvidenceIEA |
| GeneRock2 | Authority25537 | Mapping file id25537 NCBI file | EvidenceIEA |
| GeneRps27a | Authority100912032 | Mapping file id100912032 NCBI file | EvidenceIEA |
| GeneRps6ka1 | Authority81771 | Mapping file id81771 NCBI file | EvidenceIEA |
| GeneRps6ka2 | Authority117269 | Mapping file id117269 NCBI file | EvidenceIEA |
| GeneRps6ka3 | Authority501560 | Mapping file id501560 NCBI file | EvidenceIEA |
| GeneRps6ka5 | Authority314384 | Mapping file idENSRNOG00000004362 Ensembl file | EvidenceIEA |
| GeneSack1a | Authority500873 | Mapping file id500873 NCBI file | EvidenceIEA |
| GeneSack1b | Authority315829 | Mapping file id315829 NCBI file | EvidenceIEA |
| GeneSack1d | Authority311598 | Mapping file id311598 NCBI file | EvidenceIEA |
| GeneSgk1 | Authority29517 | Mapping file idENSRNOG00000011815 Ensembl file | EvidenceIEA |
| GeneSh2b2 | Authority114203 | Mapping file id114203 NCBI file | EvidenceIEA |
| GeneSh2d2a | Authority310688 | Mapping file id310688 NCBI file | EvidenceIEA |
| GeneSh3gl1 | Authority81922 | Mapping file id81922 NCBI file | EvidenceIEA |
| GeneSh3gl2 | Authority116743 | Mapping file id116743 NCBI file | EvidenceIEA |
| GeneSh3gl3 | Authority81921 | Mapping file id81921 NCBI file | EvidenceIEA |
| GeneSh3kbp1 | Authority84357 | Mapping file id84357 NCBI file | EvidenceIEA |
| GeneShb | Authority362513 | Mapping file id362513 NCBI file | EvidenceIEA |
| GeneShc1 | Authority85385 | Mapping file id85385 NCBI file | EvidenceIEA |
| GeneShc2 | Authority314612 | Mapping file id314612 NCBI file | EvidenceIEA |
| GeneSos1 | Authority313845 | Mapping file id313845 NCBI file | EvidenceIEA |
| GeneSphk1 | Authority170897 | Mapping file id170897 NCBI file | EvidenceIEA |
| GeneSpint1 | Authority311331 | Mapping file id311331 NCBI file | EvidenceIEA |
| GeneSpint2 | Authority292770 | Mapping file id292770 NCBI file | EvidenceIEA |
| GeneSpp1 | Authority25353 | Mapping file id25353 NCBI file | EvidenceIEA |
| GeneSpred1 | Authority296072 | Mapping file id296072 NCBI file | EvidenceIEA |
| GeneSpred2 | Authority305539 | Mapping file id305539 NCBI file | EvidenceIEA |
| GeneSpry1 | Authority294981 | Mapping file id294981 NCBI file | EvidenceIEA |
| GeneSpry2 | Authority306141 | Mapping file id306141 NCBI file | EvidenceIEA |
| GeneSrc | Authority83805 | Mapping file id83805 NCBI file | EvidenceIEA |
| GeneSrf | Authority501099 | Mapping file id501099 NCBI file | EvidenceIEA |
| GeneStam | Authority498798 | Mapping file id498798 NCBI file | EvidenceIEA |
| GeneStam2 | Authority311030 | Mapping file id311030 NCBI file | EvidenceIEA |
| GeneStat1 | Authority25124 | Mapping file idENSRNOG00000014079 Ensembl file | EvidenceIEA |
| GeneStat3 | Authority25125 | Mapping file id25125 NCBI file | EvidenceIEA |
| GeneStat5a | Authority24918 | Mapping file id24918 NCBI file | EvidenceIEA |
| GeneStat5b | Authority25126 | Mapping file id25126 NCBI file | EvidenceIEA |
| GeneStat6 | Authority362896 | Mapping file idENSRNOG00000025023 Ensembl file | EvidenceIEA |
| GeneStt3a | Authority500972 | Mapping file idENSRNOG00000031896 Ensembl file | EvidenceIEA |
| GeneStub1 | Authority287155 | Mapping file id287155 NCBI file | EvidenceIEA |
| GeneTcirg1 | Authority293650 | Mapping file idENSRNOG00000017220 Ensembl file | EvidenceIEA |
| GeneTec | Authority84492 | Mapping file id84492 NCBI file | EvidenceIEA |
| GeneTgfa | Authority24827 | Mapping file id24827 NCBI file | EvidenceIEA |
| GeneTgfbr3 | Authority29610 | Mapping file id29610 NCBI file | EvidenceIEA |
| GeneThbs1 | Authority445442 | Mapping file id445442 NCBI file | EvidenceIEA |
| GeneThbs2 | Authority292406 | Mapping file id292406 NCBI file | EvidenceIEA |
| GeneThbs3 | Authority681309 | Mapping file idENSRNOG00000059903 Ensembl file | EvidenceIEA |
| GeneThbs4 | Authority29220 | Mapping file idENSRNOG00000012471 Ensembl file | EvidenceIEA |
| GeneThem4 | Authority361992 | Mapping file id361992 NCBI file | EvidenceIEA |
| GeneTia1 | Authority312510 | Mapping file idENSRNOG00000016813 Ensembl file | EvidenceIEA |
| GeneTial1 | Authority361655 | Mapping file id361655 NCBI file | EvidenceIEA |
| GeneTlr9 | Authority338457 | Mapping file idENSRNOG00000048161 Ensembl file | EvidenceIEA |
| GeneTnk2 | Authority303882 | Mapping file id303882 NCBI file | EvidenceIEA |
| GeneTns3 | Authority360980 | Mapping file idENSRNOG00000025695 Ensembl file | EvidenceIEA |
| GeneTns4 | Authority303517 | Mapping file id303517 NCBI file | EvidenceIEA |
| GeneTrib3 | Authority246273 | Mapping file id246273 NCBI file | EvidenceIEA |
| GeneUba52 | Authority64156 | Mapping file id64156 NCBI file | EvidenceIEA |
| GeneUbb | Authority192255 | Mapping file id192255 NCBI file | EvidenceIEA |
| GeneUbc | Authority50522 | Mapping file id50522 NCBI file | EvidenceIEA |
| GeneUsp8 | Authority296121 | Mapping file id296121 NCBI file | EvidenceIEA |
| GeneVav1 | Authority25156 | Mapping file idENSRNOG00000050430 Ensembl file | EvidenceIEA |
| GeneVav2 | Authority296603 | Mapping file idENSRNOG00000007422 Ensembl file | EvidenceIEA |
| GeneVav3 | Authority295378 | Mapping file id295378 NCBI file | EvidenceIEA |
| GeneVegfa | Authority83785 | Mapping file id83785 NCBI file | EvidenceIEA |
| GeneVegfb | Authority89811 | Mapping file id89811 NCBI file | EvidenceIEA |
| GeneVegfc | Authority114111 | Mapping file id114111 NCBI file | EvidenceIEA |
Evidence codes on this page: IEA, as the mapping file writes them; a row carrying two was written twice by the file, once under each. The mapping file id says which file placed the gene: an NCBI Gene id from NCBI2Reactome_All_Levels.txt, an Ensembl gene id from Ensembl2Reactome_All_Levels.txt. The two files can disagree about a code, so a row's codes are the one file's view. Measured by this site's build over this release on 2026-09-09: the two files disagree on none of the 64,140 rat pairs both place.
- Reactome mapping files, the rat rows for this pathway · Reactome release 97 · read · Reactome downloads"NCBI2Reactome_All_Levels.txt" and "Ensembl2Reactome_All_Levels.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.
03The hierarchy
Parents and children in this release's hierarchy
Children
- Signaling by ALKR-RNO-20155619 genes
- Signaling by EGFRR-RNO-17792949 genes
- Signaling by ERBB2R-RNO-122798645 genes
- Signaling by ERBB4R-RNO-123639437 genes
- Signaling by FGFRR-RNO-19023687 genes
- Signaling by Insulin receptorR-RNO-7475277 genes
- Signaling by LTKR-RNO-984266310 genes
- Signaling by METR-RNO-680683469 genes
- Signaling by MST1R-RNO-88524055 genes
- Signaling by NTRKsR-RNO-16652075 genes
- Signaling by PDGFR-RNO-18679746 genes
- Signaling by SCF-KITR-RNO-143355739 genes
- Signaling by Type 1 Insulin-like Growth Factor 1 Receptor (IGF1R)R-RNO-240419248 genes
- Signaling by VEGFR-RNO-19413897 genes
Reactome's hierarchy is a graph rather than a tree: a pathway can sit under more than one parent, and the gene counts are each pathway's own placements at every level under it, so a parent's count is not the sum of its children's.
- Reactome, the rat pathway list and hierarchy relationship file · Reactome release 97 · read · Reactome downloads"ReactomePathways.txt" and "ReactomePathwaysRelation.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.