Skip to content

Create an account and get up to 25% off.

Order

Pathway Human Homo sapiens

Cytokine Signaling in Immune system

R-HSA-1280215 in Reactome release 97: under Immune System, with 859 genes placed in it by the mapping files and 8 child pathways in the hierarchy.

The same number in the other species

Reactome writes the mouse and rat events it infers from a human pathway under the human number with the species token. A door opens only where that species' own list in this release holds the id: R-MMU-1280215 (mouse), R-RNO-1280215 (rat). Whether the event was inferred from this one is what the record says.

01The record

Reactome's own record of this pathway

What this tells you

The pathway list, the hierarchy and the genes on this page are read from the files Reactome publishes for Reactome release 97, built into this site on 2026-09-09: the pathway list, the hierarchy relationship file and the two gene mapping files. The record card is the one live read, Reactome's own record of this pathway.

Reactome's download page describes the mapping files: Mapping files link the source database identifier to the lowest level pathway diagram or subset of the pathway, all levels of the pathway hierarchy or database identifier to all reactions. [R13] The gene list here is the all-levels mapping of NCBI Gene ids, filled from the all-levels mapping of Ensembl ids where the NCBI file has no row for a gene; each row names which file it came from by the shape of its source id. Each row carries the evidence codes the file writes for it, as written and unranked, and both where the file writes both; no page of Reactome's documentation the survey read defines the codes, so this page does not expand them. A gene id the identity files do not name is kept as the source's own id with no door rather than turned into a symbol.

On citing what a search finds, Reactome says: It should be remembered that while we strive to contain the most current and accurate data, Reactome should not be used in citations where other primary sources of information are available. [R12] The record card prints the literature Reactome attaches to a curated pathway for that reason. The data are public domain: All data in the Reactome database and files derived from that data are licensed under the Creative Commons Public Domain Dedication (CC0). User may copy, modify, and distribute these data, even for commercial purposes, without asking for permission. Attribution is encouraged but not required. [R10] The pathway illustrations are licensed apart, under CC BY 4.0, and none is shown here.

A gene on this list is one Reactome places in this pathway in this release, and that is all the row says: it does not say the gene is expressed in a tissue or associated with a disease, which are the other two explorers' questions, read from other sources. Reactome's papers of record are [R01] [R02].

  1. [R01] Ragueneau E, Gong C, Sinquin P, Sevilla C, Beavers D, Grentner A, et al. (2026). The Reactome Knowledgebase 2026. Nucleic Acids Research 54:D673-D681. PMID 41251150, doi 10.1093/nar/gkaf1223.
  2. [R02] Milacic M, Beavers D, Conley P, Gong C, Gillespie M, Griss J, et al. (2024). The Reactome Pathway Knowledgebase 2024. Nucleic Acids Research 52:D672-D678. PMID 37941124, doi 10.1093/nar/gkad1025.
  3. [R10] Reactome, reactome.org. License Agreement. https://reactome.org/license, read 2026-09-09.
  4. [R12] Reactome, reactome.org. Citing us. https://reactome.org/cite, read 2026-09-09.
  5. [R13] Reactome, reactome.org. Download. https://reactome.org/download-data, read 2026-09-09.
Reading this pathway's record from Reactome (the pathway record).Still reading. A first read of a pathway can take a while; this page waits up to 35 seconds for it, and its scripts then bring in the panel, or a line saying what did not arrive.

02The genes

Genes Reactome places in this human pathway

The mapping files place 859 genes in this human pathway; showing 601 to 700, in pages of 100, sorted by symbol for reading. The order carries no ranking.

Genes Reactome places in this human pathway, page 7 of 9
GenePTPN1AuthorityHGNC:9642Mapping file id5770 NCBI fileEvidenceIEA, TAS
GenePTPN11AuthorityHGNC:9644Mapping file id5781 NCBI fileEvidenceIEA, TAS
GenePTPN12AuthorityHGNC:9645Mapping file id5782 NCBI fileEvidenceTAS
GenePTPN13AuthorityHGNC:9646Mapping file id5783 NCBI fileEvidenceTAS
GenePTPN14AuthorityHGNC:9647Mapping file id5784 NCBI fileEvidenceTAS
GenePTPN18AuthorityHGNC:9649Mapping file id26469 NCBI fileEvidenceTAS
GenePTPN2AuthorityHGNC:9650Mapping file id5771 NCBI fileEvidenceTAS
GenePTPN20AuthorityHGNC:23423Mapping file id26095 NCBI fileEvidenceTAS
GenePTPN23AuthorityHGNC:14406Mapping file id25930 NCBI fileEvidenceTAS
GenePTPN4AuthorityHGNC:9656Mapping file id5775 NCBI fileEvidenceTAS
GenePTPN5AuthorityHGNC:9657Mapping file id84867 NCBI fileEvidenceTAS
GenePTPN6AuthorityHGNC:9658Mapping file id5777 NCBI fileEvidenceIEA, TAS
GenePTPN7AuthorityHGNC:9659Mapping file id5778 NCBI fileEvidenceTAS
GenePTPN9AuthorityHGNC:9661Mapping file id5780 NCBI fileEvidenceTAS
GenePTPRJAuthorityHGNC:9673Mapping file id5795 NCBI fileEvidenceTAS
GenePTPRZ1AuthorityHGNC:9685Mapping file id5803 NCBI fileEvidenceTAS
GeneRAE1AuthorityHGNC:9828Mapping file id8480 NCBI fileEvidenceTAS
GeneRAF1AuthorityHGNC:9829Mapping file id5894 NCBI fileEvidenceTAS
GeneRAG1AuthorityHGNC:9831Mapping file id5896 NCBI fileEvidenceIEA
GeneRAG2AuthorityHGNC:9832Mapping file id5897 NCBI fileEvidenceIEA
GeneRALAAuthorityHGNC:9839Mapping file id5898 NCBI fileEvidenceTAS
GeneRANBP2AuthorityHGNC:9848Mapping file id5903 NCBI fileEvidenceTAS
GeneRAP1BAuthorityHGNC:9857Mapping file id5908 NCBI fileEvidenceTAS
GeneRAPGEF1AuthorityHGNC:4568Mapping file id2889 NCBI fileEvidenceTAS
GeneRBX1AuthorityHGNC:9928Mapping file id9978 NCBI fileEvidenceTAS
GeneRELAAuthorityHGNC:9955Mapping file id5970 NCBI fileEvidenceTAS
GeneRELBAuthorityHGNC:9956Mapping file id5971 NCBI fileEvidenceTAS
GeneRHOUAuthorityHGNC:17794Mapping file id58480 NCBI fileEvidenceTAS
GeneRIGIAuthorityHGNC:19102Mapping file id23586 NCBI fileEvidenceTAS
GeneRIPK2AuthorityHGNC:10020Mapping file id8767 NCBI fileEvidenceTAS
GeneRNASELAuthorityHGNC:10050Mapping file id6041 NCBI fileEvidenceTAS
GeneRNF7AuthorityHGNC:10070Mapping file id9616 NCBI fileEvidenceIEA, TAS
GeneRORAAuthorityHGNC:10258Mapping file id6095 NCBI fileEvidenceTAS
GeneRORCAuthorityHGNC:10260Mapping file id6097 NCBI fileEvidenceTAS
GeneRPLP0AuthorityHGNC:10371Mapping file id6175 NCBI fileEvidenceTAS
GeneRPS10AuthorityHGNC:10383Mapping file id6204 NCBI fileEvidenceTAS
GeneRPS11AuthorityHGNC:10384Mapping file id6205 NCBI fileEvidenceTAS
GeneRPS12AuthorityHGNC:10385Mapping file id6206 NCBI fileEvidenceTAS
GeneRPS13AuthorityHGNC:10386Mapping file id6207 NCBI fileEvidenceTAS
GeneRPS14AuthorityHGNC:10387Mapping file id6208 NCBI fileEvidenceTAS
GeneRPS15AuthorityHGNC:10388Mapping file id6209 NCBI fileEvidenceTAS
GeneRPS15AAuthorityHGNC:10389Mapping file id6210 NCBI fileEvidenceTAS
GeneRPS16AuthorityHGNC:10396Mapping file id6217 NCBI fileEvidenceTAS
GeneRPS17AuthorityHGNC:10397Mapping file id6218 NCBI fileEvidenceTAS
GeneRPS18AuthorityHGNC:10401Mapping file id6222 NCBI fileEvidenceTAS
GeneRPS19AuthorityHGNC:10402Mapping file id6223 NCBI fileEvidenceTAS
GeneRPS2AuthorityHGNC:10404Mapping file id6187 NCBI fileEvidenceTAS
GeneRPS20AuthorityHGNC:10405Mapping file id6224 NCBI fileEvidenceTAS
GeneRPS21AuthorityHGNC:10409Mapping file id6227 NCBI fileEvidenceTAS
GeneRPS23AuthorityHGNC:10410Mapping file id6228 NCBI fileEvidenceTAS
GeneRPS24AuthorityHGNC:10411Mapping file id6229 NCBI fileEvidenceTAS
GeneRPS25AuthorityHGNC:10413Mapping file id6230 NCBI fileEvidenceTAS
GeneRPS26AuthorityHGNC:10414Mapping file id6231 NCBI fileEvidenceTAS
GeneRPS27AuthorityHGNC:10416Mapping file id6232 NCBI fileEvidenceTAS
GeneRPS27AAuthorityHGNC:10417Mapping file id6233 NCBI fileEvidenceIEA, TAS
GeneRPS27LAuthorityHGNC:18476Mapping file id51065 NCBI fileEvidenceTAS
GeneRPS28AuthorityHGNC:10418Mapping file id6234 NCBI fileEvidenceTAS
GeneRPS29AuthorityHGNC:10419Mapping file id6235 NCBI fileEvidenceTAS
GeneRPS3AuthorityHGNC:10420Mapping file id6188 NCBI fileEvidenceTAS
GeneRPS3AAuthorityHGNC:10421Mapping file id6189 NCBI fileEvidenceTAS
GeneRPS4XAuthorityHGNC:10424Mapping file id6191 NCBI fileEvidenceTAS
GeneRPS4Y1AuthorityHGNC:10425Mapping file id6192 NCBI fileEvidenceTAS
GeneRPS4Y2AuthorityHGNC:18501Mapping file id140032 NCBI fileEvidenceTAS
GeneRPS5AuthorityHGNC:10426Mapping file id6193 NCBI fileEvidenceTAS
GeneRPS6AuthorityHGNC:10429Mapping file id6194 NCBI fileEvidenceTAS
GeneRPS6KA1AuthorityHGNC:10430Mapping file id6195 NCBI fileEvidenceTAS
GeneRPS6KA2AuthorityHGNC:10431Mapping file id6196 NCBI fileEvidenceTAS
GeneRPS6KA3AuthorityHGNC:10432Mapping file id6197 NCBI fileEvidenceTAS
GeneRPS6KA5AuthorityHGNC:10434Mapping file id9252 NCBI fileEvidenceTAS
GeneRPS7AuthorityHGNC:10440Mapping file id6201 NCBI fileEvidenceTAS
GeneRPS8AuthorityHGNC:10441Mapping file id6202 NCBI fileEvidenceTAS
GeneRPS9AuthorityHGNC:10442Mapping file id6203 NCBI fileEvidenceTAS
GeneRPSAAuthorityHGNC:6502Mapping file id3921 NCBI fileEvidenceTAS
GeneRSAD2AuthorityHGNC:30908Mapping file id91543 NCBI fileEvidenceTAS
GeneS100A12AuthorityHGNC:10489Mapping file id6283 NCBI fileEvidenceTAS
GeneS100BAuthorityHGNC:10500Mapping file id6285 NCBI fileEvidenceTAS
GeneS1PR1AuthorityHGNC:3165Mapping file id1901 NCBI fileEvidenceTAS
GeneSAA1AuthorityHGNC:10513Mapping file id6288 NCBI fileEvidenceTAS
GeneSAMHD1AuthorityHGNC:15925Mapping file id25939 NCBI fileEvidenceTAS
GeneSDC1AuthorityHGNC:10658Mapping file id6382 NCBI fileEvidenceTAS
GeneSEC13AuthorityHGNC:10697Mapping file id6396 NCBI fileEvidenceTAS
GeneSEH1LAuthorityHGNC:30379Mapping file id81929 NCBI fileEvidenceTAS
GeneSEM1AuthorityHGNC:10845Mapping file id7979 NCBI fileEvidenceTAS
GeneSERPINB2AuthorityHGNC:8584Mapping file id5055 NCBI fileEvidenceTAS
GeneSFNAuthorityHGNC:10773Mapping file id2810 NCBI fileEvidenceTAS
GeneSH2B1AuthorityHGNC:30417Mapping file id25970 NCBI fileEvidenceTAS
GeneSH2B3AuthorityHGNC:29605Mapping file id10019 NCBI fileEvidenceTAS
GeneSHC1AuthorityHGNC:10840Mapping file id6464 NCBI fileEvidenceIEA, TAS
GeneSIGIRRAuthorityHGNC:30575Mapping file id59307 NCBI fileEvidenceTAS
GeneSKP1AuthorityHGNC:10899Mapping file id6500 NCBI fileEvidenceTAS
GeneSLAAuthorityHGNC:10902Mapping file id6503 NCBI fileEvidenceTAS
GeneSLA2AuthorityHGNC:17329Mapping file id84174 NCBI fileEvidenceTAS
GeneSMAD3AuthorityHGNC:6769Mapping file id4088 NCBI fileEvidenceTAS
GeneSMAD7AuthorityHGNC:6773Mapping file id4092 NCBI fileEvidenceTAS
GeneSMARCA4AuthorityHGNC:11100Mapping file id6597 NCBI fileEvidenceTAS
GeneSNAP25AuthorityHGNC:11132Mapping file id6616 NCBI fileEvidenceTAS
GeneSNCAAuthorityHGNC:11138Mapping file id6622 NCBI fileEvidenceTAS
GeneSNRPA1AuthorityHGNC:11152Mapping file id6627 NCBI fileEvidenceTAS
GeneSOCS1AuthorityHGNC:19383Mapping file id8651 NCBI fileEvidenceIEA, TAS
GeneSOCS2AuthorityHGNC:19382Mapping file id8835 NCBI fileEvidenceIEA, TAS

Evidence codes on this page: IEA, TAS, as the mapping file writes them; a row carrying two was written twice by the file, once under each. The mapping file id says which file placed the gene: an NCBI Gene id from NCBI2Reactome_All_Levels.txt, an Ensembl gene id from Ensembl2Reactome_All_Levels.txt. The two files can disagree about a code, so a row's codes are the one file's view. Measured by this site's build over this release on 2026-09-09: of the 138,908 human pathway-gene pairs both files place, 207 (0.149 per cent, over 47 genes) carry TAS in the Ensembl file where the NCBI rows carry IEA alone.

  • Reactome mapping files, the human rows for this pathway · Reactome release 97 · read · Reactome downloads"NCBI2Reactome_All_Levels.txt" and "Ensembl2Reactome_All_Levels.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.

03The hierarchy

Parents and children in this release's hierarchy

Reactome's hierarchy is a graph rather than a tree: a pathway can sit under more than one parent, and the gene counts are each pathway's own placements at every level under it, so a parent's count is not the sum of its children's.

  • Reactome, the human pathway list and hierarchy relationship file · Reactome release 97 · read · Reactome downloads"ReactomePathways.txt" and "ReactomePathwaysRelation.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.