Skip to content

Create an account and get up to 25% off.

Order

Pathway Human Homo sapiens

Cytokine Signaling in Immune system

R-HSA-1280215 in Reactome release 97: under Immune System, with 859 genes placed in it by the mapping files and 8 child pathways in the hierarchy.

The same number in the other species

Reactome writes the mouse and rat events it infers from a human pathway under the human number with the species token. A door opens only where that species' own list in this release holds the id: R-MMU-1280215 (mouse), R-RNO-1280215 (rat). Whether the event was inferred from this one is what the record says.

01The record

Reactome's own record of this pathway

What this tells you

The pathway list, the hierarchy and the genes on this page are read from the files Reactome publishes for Reactome release 97, built into this site on 2026-09-09: the pathway list, the hierarchy relationship file and the two gene mapping files. The record card is the one live read, Reactome's own record of this pathway.

Reactome's download page describes the mapping files: Mapping files link the source database identifier to the lowest level pathway diagram or subset of the pathway, all levels of the pathway hierarchy or database identifier to all reactions. [R13] The gene list here is the all-levels mapping of NCBI Gene ids, filled from the all-levels mapping of Ensembl ids where the NCBI file has no row for a gene; each row names which file it came from by the shape of its source id. Each row carries the evidence codes the file writes for it, as written and unranked, and both where the file writes both; no page of Reactome's documentation the survey read defines the codes, so this page does not expand them. A gene id the identity files do not name is kept as the source's own id with no door rather than turned into a symbol.

On citing what a search finds, Reactome says: It should be remembered that while we strive to contain the most current and accurate data, Reactome should not be used in citations where other primary sources of information are available. [R12] The record card prints the literature Reactome attaches to a curated pathway for that reason. The data are public domain: All data in the Reactome database and files derived from that data are licensed under the Creative Commons Public Domain Dedication (CC0). User may copy, modify, and distribute these data, even for commercial purposes, without asking for permission. Attribution is encouraged but not required. [R10] The pathway illustrations are licensed apart, under CC BY 4.0, and none is shown here.

A gene on this list is one Reactome places in this pathway in this release, and that is all the row says: it does not say the gene is expressed in a tissue or associated with a disease, which are the other two explorers' questions, read from other sources. Reactome's papers of record are [R01] [R02].

  1. [R01] Ragueneau E, Gong C, Sinquin P, Sevilla C, Beavers D, Grentner A, et al. (2026). The Reactome Knowledgebase 2026. Nucleic Acids Research 54:D673-D681. PMID 41251150, doi 10.1093/nar/gkaf1223.
  2. [R02] Milacic M, Beavers D, Conley P, Gong C, Gillespie M, Griss J, et al. (2024). The Reactome Pathway Knowledgebase 2024. Nucleic Acids Research 52:D672-D678. PMID 37941124, doi 10.1093/nar/gkad1025.
  3. [R10] Reactome, reactome.org. License Agreement. https://reactome.org/license, read 2026-09-09.
  4. [R12] Reactome, reactome.org. Citing us. https://reactome.org/cite, read 2026-09-09.
  5. [R13] Reactome, reactome.org. Download. https://reactome.org/download-data, read 2026-09-09.
Reading this pathway's record from Reactome (the pathway record).Still reading. A first read of a pathway can take a while; this page waits up to 35 seconds for it, and its scripts then bring in the panel, or a line saying what did not arrive.

02The genes

Genes Reactome places in this human pathway

The mapping files place 859 genes in this human pathway; showing 701 to 800, in pages of 100, sorted by symbol for reading. The order carries no ranking.

Genes Reactome places in this human pathway, page 8 of 9
GeneSOCS3AuthorityHGNC:19391Mapping file id9021 NCBI fileEvidenceIEA, TAS
GeneSOCS5AuthorityHGNC:16852Mapping file id9655 NCBI fileEvidenceTAS
GeneSOCS6AuthorityHGNC:16833Mapping file id9306 NCBI fileEvidenceTAS
GeneSOD1AuthorityHGNC:11179Mapping file id6647 NCBI fileEvidenceTAS
GeneSOD2AuthorityHGNC:11180Mapping file id6648 NCBI fileEvidenceTAS
GeneSOS1AuthorityHGNC:11187Mapping file id6654 NCBI fileEvidenceIEA, TAS
GeneSOS2AuthorityHGNC:11188Mapping file id6655 NCBI fileEvidenceTAS
GeneSOX2AuthorityHGNC:11195Mapping file id6657 NCBI fileEvidenceTAS
GeneSP100AuthorityHGNC:11206Mapping file id6672 NCBI fileEvidenceTAS
GeneSPHK1AuthorityHGNC:11240Mapping file id8877 NCBI fileEvidenceTAS
GeneSQSTM1AuthorityHGNC:11280Mapping file id8878 NCBI fileEvidenceTAS
GeneSRCAuthorityHGNC:11283Mapping file id6714 NCBI fileEvidenceIEA
GeneSTAT1AuthorityHGNC:11362Mapping file id6772 NCBI fileEvidenceIEA, TAS
GeneSTAT2AuthorityHGNC:11363Mapping file id6773 NCBI fileEvidenceIEA, TAS
GeneSTAT3AuthorityHGNC:11364Mapping file id6774 NCBI fileEvidenceIEA, TAS
GeneSTAT4AuthorityHGNC:11365Mapping file id6775 NCBI fileEvidenceIEA, TAS
GeneSTAT5AAuthorityHGNC:11366Mapping file id6776 NCBI fileEvidenceIEA, TAS
GeneSTAT5BAuthorityHGNC:11367Mapping file id6777 NCBI fileEvidenceIEA, TAS
GeneSTAT6AuthorityHGNC:11368Mapping file id6778 NCBI fileEvidenceTAS
GeneSTX1AAuthorityHGNC:11433Mapping file id6804 NCBI fileEvidenceTAS
GeneSTX3AuthorityHGNC:11438Mapping file id6809 NCBI fileEvidenceTAS
GeneSTX4AuthorityHGNC:11439Mapping file id6810 NCBI fileEvidenceTAS
GeneSTXBP2AuthorityHGNC:11445Mapping file id6813 NCBI fileEvidenceTAS
GeneSUMO1AuthorityHGNC:12502Mapping file id7341 NCBI fileEvidenceTAS
GeneSYKAuthorityHGNC:11491Mapping file id6850 NCBI fileEvidenceIEA, TAS
GeneTAB1AuthorityHGNC:18157Mapping file id10454 NCBI fileEvidenceTAS
GeneTAB2AuthorityHGNC:17075Mapping file id23118 NCBI fileEvidenceTAS
GeneTAB3AuthorityHGNC:30681Mapping file id257397 NCBI fileEvidenceTAS
GeneTALDO1AuthorityHGNC:11559Mapping file id6888 NCBI fileEvidenceTAS
GeneTARBP2AuthorityHGNC:11569Mapping file id6895 NCBI fileEvidenceTAS
GeneTBK1AuthorityHGNC:11584Mapping file id29110 NCBI fileEvidenceTAS
GeneTCP1AuthorityHGNC:11655Mapping file id6950 NCBI fileEvidenceTAS
GeneTECAuthorityHGNC:11719Mapping file id7006 NCBI fileEvidenceTAS
GeneTGFB1AuthorityHGNC:11766Mapping file id7040 NCBI fileEvidenceTAS
GeneTHOC5AuthorityHGNC:19074Mapping file id8563 NCBI fileEvidenceIEA
GeneTIFAAuthorityHGNC:19075Mapping file id92610 NCBI fileEvidenceTAS
GeneTIMP1AuthorityHGNC:11820Mapping file id7076 NCBI fileEvidenceTAS
GeneTNFAuthorityHGNC:11892Mapping file id7124 NCBI fileEvidenceTAS
GeneTNFRSF11AAuthorityHGNC:11908Mapping file id8792 NCBI fileEvidenceTAS
GeneTNFRSF11BAuthorityHGNC:11909Mapping file id4982 NCBI fileEvidenceTAS
GeneTNFRSF12AAuthorityHGNC:18152Mapping file id51330 NCBI fileEvidenceTAS
GeneTNFRSF13BAuthorityHGNC:18153Mapping file id23495 NCBI fileEvidenceTAS
GeneTNFRSF13CAuthorityHGNC:17755Mapping file id115650 NCBI fileEvidenceTAS
GeneTNFRSF14AuthorityHGNC:11912Mapping file id8764 NCBI fileEvidenceTAS
GeneTNFRSF17AuthorityHGNC:11913Mapping file id608 NCBI fileEvidenceTAS
GeneTNFRSF18AuthorityHGNC:11914Mapping file id8784 NCBI fileEvidenceTAS
GeneTNFRSF1AAuthorityHGNC:11916Mapping file id7132 NCBI fileEvidenceTAS
GeneTNFRSF1BAuthorityHGNC:11917Mapping file id7133 NCBI fileEvidenceTAS
GeneTNFRSF25AuthorityHGNC:11910Mapping file id8718 NCBI fileEvidenceTAS
GeneTNFRSF4AuthorityHGNC:11918Mapping file id7293 NCBI fileEvidenceTAS
GeneTNFRSF6BAuthorityHGNC:11921Mapping file id8771 NCBI fileEvidenceTAS
GeneTNFRSF8AuthorityHGNC:11923Mapping file id943 NCBI fileEvidenceTAS
GeneTNFRSF9AuthorityHGNC:11924Mapping file id3604 NCBI fileEvidenceTAS
GeneTNFSF11AuthorityHGNC:11926Mapping file id8600 NCBI fileEvidenceTAS
GeneTNFSF12AuthorityHGNC:11927Mapping file id8742 NCBI fileEvidenceTAS
GeneTNFSF13AuthorityHGNC:11928Mapping file id8741 NCBI fileEvidenceTAS
GeneTNFSF13BAuthorityHGNC:11929Mapping file id10673 NCBI fileEvidenceTAS
GeneTNFSF14AuthorityHGNC:11930Mapping file id8740 NCBI fileEvidenceIEA, TAS
GeneTNFSF15AuthorityHGNC:11931Mapping file id9966 NCBI fileEvidenceTAS
GeneTNFSF18AuthorityHGNC:11932Mapping file id8995 NCBI fileEvidenceTAS
GeneTNFSF4AuthorityHGNC:11934Mapping file id7292 NCBI fileEvidenceTAS
GeneTNFSF8AuthorityHGNC:11938Mapping file id944 NCBI fileEvidenceTAS
GeneTNFSF9AuthorityHGNC:11939Mapping file id8744 NCBI fileEvidenceTAS
GeneTNIP2AuthorityHGNC:19118Mapping file id79155 NCBI fileEvidenceTAS
GeneTOLLIPAuthorityHGNC:16476Mapping file id54472 NCBI fileEvidenceTAS
GeneTP53AuthorityHGNC:11998Mapping file id7157 NCBI fileEvidenceTAS
GeneTPRAuthorityHGNC:12017Mapping file id7175 NCBI fileEvidenceTAS
GeneTRAF2AuthorityHGNC:12032Mapping file id7186 NCBI fileEvidenceTAS
GeneTRAF3AuthorityHGNC:12033Mapping file id7187 NCBI fileEvidenceTAS
GeneTRAF6AuthorityHGNC:12036Mapping file id7189 NCBI fileEvidenceTAS
GeneTRIM10AuthorityHGNC:10072Mapping file id10107 NCBI fileEvidenceTAS
GeneTRIM14AuthorityHGNC:16283Mapping file id9830 NCBI fileEvidenceTAS
GeneTRIM17AuthorityHGNC:13430Mapping file id51127 NCBI fileEvidenceTAS
GeneTRIM2AuthorityHGNC:15974Mapping file id23321 NCBI fileEvidenceTAS
GeneTRIM21AuthorityHGNC:11312Mapping file id6737 NCBI fileEvidenceTAS
GeneTRIM22AuthorityHGNC:16379Mapping file id10346 NCBI fileEvidenceTAS
GeneTRIM25AuthorityHGNC:12932Mapping file id7706 NCBI fileEvidenceTAS
GeneTRIM26AuthorityHGNC:12962Mapping file id7726 NCBI fileEvidenceTAS
GeneTRIM29AuthorityHGNC:17274Mapping file id23650 NCBI fileEvidenceTAS
GeneTRIM3AuthorityHGNC:10064Mapping file id10612 NCBI fileEvidenceTAS
GeneTRIM31AuthorityHGNC:16289Mapping file id11074 NCBI fileEvidenceTAS
GeneTRIM34AuthorityHGNC:10063Mapping file id53840 NCBI fileEvidenceTAS
GeneTRIM35AuthorityHGNC:16285Mapping file id23087 NCBI fileEvidenceTAS
GeneTRIM38AuthorityHGNC:10059Mapping file id10475 NCBI fileEvidenceTAS
GeneTRIM45AuthorityHGNC:19018Mapping file id80263 NCBI fileEvidenceTAS
GeneTRIM46AuthorityHGNC:19019Mapping file id80128 NCBI fileEvidenceTAS
GeneTRIM48AuthorityHGNC:19021Mapping file id79097 NCBI fileEvidenceTAS
GeneTRIM5AuthorityHGNC:16276Mapping file id85363 NCBI fileEvidenceTAS
GeneTRIM6AuthorityHGNC:16277Mapping file id117854 NCBI fileEvidenceTAS
GeneTRIM62AuthorityHGNC:25574Mapping file id55223 NCBI fileEvidenceTAS
GeneTRIM68AuthorityHGNC:21161Mapping file id55128 NCBI fileEvidenceTAS
GeneTRIM8AuthorityHGNC:15579Mapping file id81603 NCBI fileEvidenceTAS
GeneTSLPAuthorityHGNC:30743Mapping file id85480 NCBI fileEvidenceIEA, TAS
GeneTUBA1AAuthorityHGNC:20766Mapping file id7846 NCBI fileEvidenceTAS
GeneTUBA1BAuthorityHGNC:18809Mapping file id10376 NCBI fileEvidenceTAS
GeneTUBA1CAuthorityHGNC:20768Mapping file id84790 NCBI fileEvidenceTAS
GeneTUBA3CAuthorityHGNC:12408Mapping file id7278 NCBI fileEvidenceTAS
GeneTUBA3DAuthorityHGNC:24071Mapping file id113457 NCBI fileEvidenceTAS
GeneTUBA3EAuthorityHGNC:20765Mapping file id112714 NCBI fileEvidenceTAS
GeneTUBA4AAuthorityHGNC:12407Mapping file id7277 NCBI fileEvidenceTAS

Evidence codes on this page: IEA, TAS, as the mapping file writes them; a row carrying two was written twice by the file, once under each. The mapping file id says which file placed the gene: an NCBI Gene id from NCBI2Reactome_All_Levels.txt, an Ensembl gene id from Ensembl2Reactome_All_Levels.txt. The two files can disagree about a code, so a row's codes are the one file's view. Measured by this site's build over this release on 2026-09-09: of the 138,908 human pathway-gene pairs both files place, 207 (0.149 per cent, over 47 genes) carry TAS in the Ensembl file where the NCBI rows carry IEA alone.

  • Reactome mapping files, the human rows for this pathway · Reactome release 97 · read · Reactome downloads"NCBI2Reactome_All_Levels.txt" and "Ensembl2Reactome_All_Levels.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.

03The hierarchy

Parents and children in this release's hierarchy

Reactome's hierarchy is a graph rather than a tree: a pathway can sit under more than one parent, and the gene counts are each pathway's own placements at every level under it, so a parent's count is not the sum of its children's.

  • Reactome, the human pathway list and hierarchy relationship file · Reactome release 97 · read · Reactome downloads"ReactomePathways.txt" and "ReactomePathwaysRelation.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.