Pathway Human Homo sapiens
Disease
R-HSA-1643685 in Reactome release 97: a top-level pathway, with 2,550 genes placed in it by the mapping files and 12 child pathways in the hierarchy.
The same number in the other species
Reactome writes the mouse and rat events it infers from a human pathway under the human number with the species token. A door opens only where that species' own list in this release holds the id; neither of the other two lists holds it. Whether the event was inferred from this one is what the record says.
01The record
Reactome's own record of this pathway
What this tells you
The pathway list, the hierarchy and the genes on this page are read from the files Reactome publishes for Reactome release 97, built into this site on 2026-09-09: the pathway list, the hierarchy relationship file and the two gene mapping files. The record card is the one live read, Reactome's own record of this pathway.
Reactome's download page describes the mapping files: Mapping files link the source database identifier to the lowest level pathway diagram or subset of the pathway, all levels of the pathway hierarchy or database identifier to all reactions.
[R13] The gene list here is the all-levels mapping of NCBI Gene ids, filled from the all-levels mapping of Ensembl ids where the NCBI file has no row for a gene; each row names which file it came from by the shape of its source id. Each row carries the evidence codes the file writes for it, as written and unranked, and both where the file writes both; no page of Reactome's documentation the survey read defines the codes, so this page does not expand them. A gene id the identity files do not name is kept as the source's own id with no door rather than turned into a symbol.
On citing what a search finds, Reactome says: It should be remembered that while we strive to contain the most current and accurate data, Reactome should not be used in citations where other primary sources of information are available.
[R12] The record card prints the literature Reactome attaches to a curated pathway for that reason. The data are public domain: All data in the Reactome database and files derived from that data are licensed under the Creative Commons Public Domain Dedication (CC0). User may copy, modify, and distribute these data, even for commercial purposes, without asking for permission. Attribution is encouraged but not required.
[R10] The pathway illustrations are licensed apart, under CC BY 4.0, and none is shown here.
A gene on this list is one Reactome places in this pathway in this release, and that is all the row says: it does not say the gene is expressed in a tissue or associated with a disease, which are the other two explorers' questions, read from other sources. Reactome's papers of record are [R01] [R02].
- [R01] Ragueneau E, Gong C, Sinquin P, Sevilla C, Beavers D, Grentner A, et al. (2026). The Reactome Knowledgebase 2026. Nucleic Acids Research 54:D673-D681. PMID 41251150, doi 10.1093/nar/gkaf1223.
- [R02] Milacic M, Beavers D, Conley P, Gong C, Gillespie M, Griss J, et al. (2024). The Reactome Pathway Knowledgebase 2024. Nucleic Acids Research 52:D672-D678. PMID 37941124, doi 10.1093/nar/gkad1025.
- [R10] Reactome, reactome.org. License Agreement. https://reactome.org/license, read 2026-09-09.
- [R12] Reactome, reactome.org. Citing us. https://reactome.org/cite, read 2026-09-09.
- [R13] Reactome, reactome.org. Download. https://reactome.org/download-data, read 2026-09-09.
02The genes
Genes Reactome places in this human pathway
The mapping files place 2,550 genes in this human pathway; showing 1,501 to 1,600, in pages of 100, sorted by symbol for reading. The order carries no ranking.
| Gene | Authority id | Mapping file id | Evidence codes |
|---|---|---|---|
| GenePSMA6 | AuthorityHGNC:9535 | Mapping file id5687 NCBI file | EvidenceTAS |
| GenePSMA7 | AuthorityHGNC:9536 | Mapping file id5688 NCBI file | EvidenceTAS |
| GenePSMB1 | AuthorityHGNC:9537 | Mapping file id5689 NCBI file | EvidenceTAS |
| GenePSMB2 | AuthorityHGNC:9539 | Mapping file id5690 NCBI file | EvidenceTAS |
| GenePSMB3 | AuthorityHGNC:9540 | Mapping file id5691 NCBI file | EvidenceTAS |
| GenePSMB4 | AuthorityHGNC:9541 | Mapping file id5692 NCBI file | EvidenceTAS |
| GenePSMB5 | AuthorityHGNC:9542 | Mapping file id5693 NCBI file | EvidenceTAS |
| GenePSMB6 | AuthorityHGNC:9543 | Mapping file id5694 NCBI file | EvidenceTAS |
| GenePSMB7 | AuthorityHGNC:9544 | Mapping file id5695 NCBI file | EvidenceTAS |
| GenePSMC1 | AuthorityHGNC:9547 | Mapping file id5700 NCBI file | EvidenceTAS |
| GenePSMC2 | AuthorityHGNC:9548 | Mapping file id5701 NCBI file | EvidenceTAS |
| GenePSMC3 | AuthorityHGNC:9549 | Mapping file id5702 NCBI file | EvidenceTAS |
| GenePSMC4 | AuthorityHGNC:9551 | Mapping file id5704 NCBI file | EvidenceTAS |
| GenePSMC5 | AuthorityHGNC:9552 | Mapping file id5705 NCBI file | EvidenceTAS |
| GenePSMC6 | AuthorityHGNC:9553 | Mapping file id5706 NCBI file | EvidenceTAS |
| GenePSMD1 | AuthorityHGNC:9554 | Mapping file id5707 NCBI file | EvidenceTAS |
| GenePSMD11 | AuthorityHGNC:9556 | Mapping file id5717 NCBI file | EvidenceTAS |
| GenePSMD12 | AuthorityHGNC:9557 | Mapping file id5718 NCBI file | EvidenceTAS |
| GenePSMD13 | AuthorityHGNC:9558 | Mapping file id5719 NCBI file | EvidenceTAS |
| GenePSMD14 | AuthorityHGNC:16889 | Mapping file id10213 NCBI file | EvidenceTAS |
| GenePSMD2 | AuthorityHGNC:9559 | Mapping file id5708 NCBI file | EvidenceTAS |
| GenePSMD3 | AuthorityHGNC:9560 | Mapping file id5709 NCBI file | EvidenceTAS |
| GenePSMD6 | AuthorityHGNC:9564 | Mapping file id9861 NCBI file | EvidenceTAS |
| GenePSMD7 | AuthorityHGNC:9565 | Mapping file id5713 NCBI file | EvidenceTAS |
| GenePSMD8 | AuthorityHGNC:9566 | Mapping file id5714 NCBI file | EvidenceTAS |
| GenePSTPIP1 | AuthorityHGNC:9580 | Mapping file id9051 NCBI file | EvidenceTAS |
| GenePTBP1 | AuthorityHGNC:9583 | Mapping file id5725 NCBI file | EvidenceTAS |
| GenePTEN | AuthorityHGNC:9588 | Mapping file id5728 NCBI file | EvidenceTAS |
| GenePTGES3 | AuthorityHGNC:16049 | Mapping file id10728 NCBI file | EvidenceTAS |
| GenePTK2 | AuthorityHGNC:9611 | Mapping file id5747 NCBI file | EvidenceTAS |
| GenePTPN11 | AuthorityHGNC:9644 | Mapping file id5781 NCBI file | EvidenceTAS |
| GenePTPN12 | AuthorityHGNC:9645 | Mapping file id5782 NCBI file | EvidenceTAS |
| GenePTPN6 | AuthorityHGNC:9658 | Mapping file id5777 NCBI file | EvidenceTAS |
| GenePUF60 | AuthorityHGNC:17042 | Mapping file id22827 NCBI file | EvidenceTAS |
| GenePYCARD | AuthorityHGNC:16608 | Mapping file id29108 NCBI file | EvidenceTAS |
| GeneQKI | AuthorityHGNC:21100 | Mapping file id9444 NCBI file | EvidenceTAS |
| GeneRAB5A | AuthorityHGNC:9783 | Mapping file id5868 NCBI file | EvidenceTAS |
| GeneRAB5B | AuthorityHGNC:9784 | Mapping file id5869 NCBI file | EvidenceTAS |
| GeneRAB5C | AuthorityHGNC:9785 | Mapping file id5878 NCBI file | EvidenceTAS |
| GeneRAB7A | AuthorityHGNC:9788 | Mapping file id7879 NCBI file | EvidenceTAS |
| GeneRAC1 | AuthorityHGNC:9801 | Mapping file id5879 NCBI file | EvidenceIEA, TAS |
| GeneRAC2 | AuthorityHGNC:9802 | Mapping file id5880 NCBI file | EvidenceTAS |
| GeneRAD1 | AuthorityHGNC:9806 | Mapping file id5810 NCBI file | EvidenceTAS |
| GeneRAD17 | AuthorityHGNC:9807 | Mapping file id5884 NCBI file | EvidenceTAS |
| GeneRAD50 | AuthorityHGNC:9816 | Mapping file id10111 NCBI file | EvidenceTAS |
| GeneRAD51 | AuthorityHGNC:9817 | Mapping file id5888 NCBI file | EvidenceTAS |
| GeneRAD51AP1 | AuthorityHGNC:16956 | Mapping file id10635 NCBI file | EvidenceTAS |
| GeneRAD51B | AuthorityHGNC:9822 | Mapping file id5890 NCBI file | EvidenceTAS |
| GeneRAD51C | AuthorityHGNC:9820 | Mapping file id5889 NCBI file | EvidenceTAS |
| GeneRAD51D | AuthorityHGNC:9823 | Mapping file id5892 NCBI file | EvidenceTAS |
| GeneRAD9A | AuthorityHGNC:9827 | Mapping file id5883 NCBI file | EvidenceTAS |
| GeneRAD9B | AuthorityHGNC:21700 | Mapping file id144715 NCBI file | EvidenceTAS |
| GeneRAE1 | AuthorityHGNC:9828 | Mapping file id8480 NCBI file | EvidenceIEA, TAS |
| GeneRAF1 | AuthorityHGNC:9829 | Mapping file id5894 NCBI file | EvidenceTAS |
| GeneRAN | AuthorityHGNC:9846 | Mapping file id5901 NCBI file | EvidenceTAS |
| GeneRANBP1 | AuthorityHGNC:9847 | Mapping file id5902 NCBI file | EvidenceTAS |
| GeneRANBP2 | AuthorityHGNC:9848 | Mapping file id5903 NCBI file | EvidenceIEA, TAS |
| GeneRANGAP1 | AuthorityHGNC:9854 | Mapping file id5905 NCBI file | EvidenceTAS |
| GeneRAP1A | AuthorityHGNC:9855 | Mapping file id5906 NCBI file | EvidenceTAS |
| GeneRAP1B | AuthorityHGNC:9857 | Mapping file id5908 NCBI file | EvidenceTAS |
| GeneRB1 | AuthorityHGNC:9884 | Mapping file id5925 NCBI file | EvidenceIEA, TAS |
| GeneRBBP4 | AuthorityHGNC:9887 | Mapping file id5928 NCBI file | EvidenceTAS |
| GeneRBBP5 | AuthorityHGNC:9888 | Mapping file id5929 NCBI file | EvidenceTAS |
| GeneRBBP7 | AuthorityHGNC:9890 | Mapping file id5931 NCBI file | EvidenceTAS |
| GeneRBBP8 | AuthorityHGNC:9891 | Mapping file id5932 NCBI file | EvidenceTAS |
| GeneRBM10 | AuthorityHGNC:9896 | Mapping file id8241 NCBI file | EvidenceTAS |
| GeneRBM17 | AuthorityHGNC:16944 | Mapping file id84991 NCBI file | EvidenceTAS |
| GeneRBM22 | AuthorityHGNC:25503 | Mapping file id55696 NCBI file | EvidenceTAS |
| GeneRBM5 | AuthorityHGNC:9902 | Mapping file id10181 NCBI file | EvidenceTAS |
| GeneRBMX | AuthorityHGNC:9910 | Mapping file id27316 NCBI file | EvidenceTAS |
| GeneRBP1 | AuthorityHGNC:9919 | Mapping file id5947 NCBI file | EvidenceTAS |
| GeneRBP4 | AuthorityHGNC:9922 | Mapping file id5950 NCBI file | EvidenceTAS |
| GeneRBPJ | AuthorityHGNC:5724 | Mapping file id3516 NCBI file | EvidenceTAS |
| GeneRBX1 | AuthorityHGNC:9928 | Mapping file id9978 NCBI file | EvidenceTAS |
| GeneRCAN3 | AuthorityHGNC:3042 | Mapping file id11123 NCBI file | EvidenceTAS |
| GeneRCC1 | AuthorityHGNC:1913 | Mapping file id1104 NCBI file | EvidenceTAS |
| GeneRCOR1 | AuthorityHGNC:17441 | Mapping file id23186 NCBI file | EvidenceTAS |
| GeneRDH12 | AuthorityHGNC:19977 | Mapping file id145226 NCBI file | EvidenceTAS |
| GeneRDH5 | AuthorityHGNC:9940 | Mapping file id5959 NCBI file | EvidenceTAS |
| GeneRELA | AuthorityHGNC:9955 | Mapping file id5970 NCBI file | EvidenceTAS |
| GeneREST | AuthorityHGNC:9966 | Mapping file id5978 NCBI file | EvidenceTAS |
| GeneRETREG1 | AuthorityHGNC:25964 | Mapping file id54463 NCBI file | EvidenceTAS |
| GeneRFC2 | AuthorityHGNC:9970 | Mapping file id5982 NCBI file | EvidenceTAS |
| GeneRFC3 | AuthorityHGNC:9971 | Mapping file id5983 NCBI file | EvidenceTAS |
| GeneRFC4 | AuthorityHGNC:9972 | Mapping file id5984 NCBI file | EvidenceTAS |
| GeneRFC5 | AuthorityHGNC:9973 | Mapping file id5985 NCBI file | EvidenceTAS |
| GeneRFT1 | AuthorityHGNC:30220 | Mapping file id91869 NCBI file | EvidenceTAS |
| GeneRHAG | AuthorityHGNC:10006 | Mapping file id6005 NCBI file | EvidenceTAS |
| GeneRHBDF2 | AuthorityHGNC:20788 | Mapping file id79651 NCBI file | EvidenceTAS |
| GeneRHNO1 | AuthorityHGNC:28206 | Mapping file id83695 NCBI file | EvidenceTAS |
| GeneRHOG | AuthorityHGNC:672 | Mapping file id391 NCBI file | EvidenceTAS |
| GeneRICTOR | AuthorityHGNC:28611 | Mapping file id253260 NCBI file | EvidenceTAS |
| GeneRIGI | AuthorityHGNC:19102 | Mapping file id23586 NCBI file | EvidenceTAS |
| GeneRIPK1 | AuthorityHGNC:10019 | Mapping file id8737 NCBI file | EvidenceTAS |
| GeneRIPK2 | AuthorityHGNC:10020 | Mapping file id8767 NCBI file | EvidenceTAS |
| GeneRIPK3 | AuthorityHGNC:10021 | Mapping file id11035 NCBI file | EvidenceTAS |
| GeneRLBP1 | AuthorityHGNC:10024 | Mapping file id6017 NCBI file | EvidenceTAS |
| GeneRMI1 | AuthorityHGNC:25764 | Mapping file id80010 NCBI file | EvidenceTAS |
| GeneRMI2 | AuthorityHGNC:28349 | Mapping file id116028 NCBI file | EvidenceTAS |
| GeneRNASEK | AuthorityHGNC:33911 | Mapping file id440400 NCBI file | EvidenceTAS |
Evidence codes on this page: IEA, TAS, as the mapping file writes them; a row carrying two was written twice by the file, once under each. The mapping file id says which file placed the gene: an NCBI Gene id from NCBI2Reactome_All_Levels.txt, an Ensembl gene id from Ensembl2Reactome_All_Levels.txt. The two files can disagree about a code, so a row's codes are the one file's view. Measured by this site's build over this release on 2026-09-09: of the 138,908 human pathway-gene pairs both files place, 207 (0.149 per cent, over 47 genes) carry TAS in the Ensembl file where the NCBI rows carry IEA alone.
- Reactome mapping files, the human rows for this pathway · Reactome release 97 · read · Reactome downloads"NCBI2Reactome_All_Levels.txt" and "Ensembl2Reactome_All_Levels.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.
03The hierarchy
Parents and children in this release's hierarchy
Parents
None: this is a top-level pathway of the release.
Children
- Diseases of cellular response to stressR-HSA-96751323 genes
- Diseases of DNA repairR-HSA-967513551 genes
- Diseases of hemostasisR-HSA-967179324 genes
- Diseases of Immune SystemR-HSA-526027139 genes
- Diseases of metabolismR-HSA-5668914272 genes
- Diseases of mitotic cell cycleR-HSA-967512638 genes
- Diseases of programmed cell deathR-HSA-9645723108 genes
- Diseases of signal transduction by growth factor receptors and second messengersR-HSA-5663202456 genes
- Diseases of the neuronal systemR-HSA-967514314 genes
- Disorders of Developmental BiologyR-HSA-967515120 genes
- Disorders of transmembrane transportersR-HSA-5619115163 genes
- Infectious diseaseR-HSA-56632051,731 genes
Reactome's hierarchy is a graph rather than a tree: a pathway can sit under more than one parent, and the gene counts are each pathway's own placements at every level under it, so a parent's count is not the sum of its children's.
- Reactome, the human pathway list and hierarchy relationship file · Reactome release 97 · read · Reactome downloads"ReactomePathways.txt" and "ReactomePathwaysRelation.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.