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Pathway Human Homo sapiens

Disease

R-HSA-1643685 in Reactome release 97: a top-level pathway, with 2,550 genes placed in it by the mapping files and 12 child pathways in the hierarchy.

The same number in the other species

Reactome writes the mouse and rat events it infers from a human pathway under the human number with the species token. A door opens only where that species' own list in this release holds the id; neither of the other two lists holds it. Whether the event was inferred from this one is what the record says.

01The record

Reactome's own record of this pathway

What this tells you

The pathway list, the hierarchy and the genes on this page are read from the files Reactome publishes for Reactome release 97, built into this site on 2026-09-09: the pathway list, the hierarchy relationship file and the two gene mapping files. The record card is the one live read, Reactome's own record of this pathway.

Reactome's download page describes the mapping files: Mapping files link the source database identifier to the lowest level pathway diagram or subset of the pathway, all levels of the pathway hierarchy or database identifier to all reactions. [R13] The gene list here is the all-levels mapping of NCBI Gene ids, filled from the all-levels mapping of Ensembl ids where the NCBI file has no row for a gene; each row names which file it came from by the shape of its source id. Each row carries the evidence codes the file writes for it, as written and unranked, and both where the file writes both; no page of Reactome's documentation the survey read defines the codes, so this page does not expand them. A gene id the identity files do not name is kept as the source's own id with no door rather than turned into a symbol.

On citing what a search finds, Reactome says: It should be remembered that while we strive to contain the most current and accurate data, Reactome should not be used in citations where other primary sources of information are available. [R12] The record card prints the literature Reactome attaches to a curated pathway for that reason. The data are public domain: All data in the Reactome database and files derived from that data are licensed under the Creative Commons Public Domain Dedication (CC0). User may copy, modify, and distribute these data, even for commercial purposes, without asking for permission. Attribution is encouraged but not required. [R10] The pathway illustrations are licensed apart, under CC BY 4.0, and none is shown here.

A gene on this list is one Reactome places in this pathway in this release, and that is all the row says: it does not say the gene is expressed in a tissue or associated with a disease, which are the other two explorers' questions, read from other sources. Reactome's papers of record are [R01] [R02].

  1. [R01] Ragueneau E, Gong C, Sinquin P, Sevilla C, Beavers D, Grentner A, et al. (2026). The Reactome Knowledgebase 2026. Nucleic Acids Research 54:D673-D681. PMID 41251150, doi 10.1093/nar/gkaf1223.
  2. [R02] Milacic M, Beavers D, Conley P, Gong C, Gillespie M, Griss J, et al. (2024). The Reactome Pathway Knowledgebase 2024. Nucleic Acids Research 52:D672-D678. PMID 37941124, doi 10.1093/nar/gkad1025.
  3. [R10] Reactome, reactome.org. License Agreement. https://reactome.org/license, read 2026-09-09.
  4. [R12] Reactome, reactome.org. Citing us. https://reactome.org/cite, read 2026-09-09.
  5. [R13] Reactome, reactome.org. Download. https://reactome.org/download-data, read 2026-09-09.
Reading this pathway's record from Reactome (the pathway record).Still reading. A first read of a pathway can take a while; this page waits up to 35 seconds for it, and its scripts then bring in the panel, or a line saying what did not arrive.

02The genes

Genes Reactome places in this human pathway

The mapping files place 2,550 genes in this human pathway; showing 1,501 to 1,600, in pages of 100, sorted by symbol for reading. The order carries no ranking.

Genes Reactome places in this human pathway, page 16 of 26
GenePSMA6AuthorityHGNC:9535Mapping file id5687 NCBI fileEvidenceTAS
GenePSMA7AuthorityHGNC:9536Mapping file id5688 NCBI fileEvidenceTAS
GenePSMB1AuthorityHGNC:9537Mapping file id5689 NCBI fileEvidenceTAS
GenePSMB2AuthorityHGNC:9539Mapping file id5690 NCBI fileEvidenceTAS
GenePSMB3AuthorityHGNC:9540Mapping file id5691 NCBI fileEvidenceTAS
GenePSMB4AuthorityHGNC:9541Mapping file id5692 NCBI fileEvidenceTAS
GenePSMB5AuthorityHGNC:9542Mapping file id5693 NCBI fileEvidenceTAS
GenePSMB6AuthorityHGNC:9543Mapping file id5694 NCBI fileEvidenceTAS
GenePSMB7AuthorityHGNC:9544Mapping file id5695 NCBI fileEvidenceTAS
GenePSMC1AuthorityHGNC:9547Mapping file id5700 NCBI fileEvidenceTAS
GenePSMC2AuthorityHGNC:9548Mapping file id5701 NCBI fileEvidenceTAS
GenePSMC3AuthorityHGNC:9549Mapping file id5702 NCBI fileEvidenceTAS
GenePSMC4AuthorityHGNC:9551Mapping file id5704 NCBI fileEvidenceTAS
GenePSMC5AuthorityHGNC:9552Mapping file id5705 NCBI fileEvidenceTAS
GenePSMC6AuthorityHGNC:9553Mapping file id5706 NCBI fileEvidenceTAS
GenePSMD1AuthorityHGNC:9554Mapping file id5707 NCBI fileEvidenceTAS
GenePSMD11AuthorityHGNC:9556Mapping file id5717 NCBI fileEvidenceTAS
GenePSMD12AuthorityHGNC:9557Mapping file id5718 NCBI fileEvidenceTAS
GenePSMD13AuthorityHGNC:9558Mapping file id5719 NCBI fileEvidenceTAS
GenePSMD14AuthorityHGNC:16889Mapping file id10213 NCBI fileEvidenceTAS
GenePSMD2AuthorityHGNC:9559Mapping file id5708 NCBI fileEvidenceTAS
GenePSMD3AuthorityHGNC:9560Mapping file id5709 NCBI fileEvidenceTAS
GenePSMD6AuthorityHGNC:9564Mapping file id9861 NCBI fileEvidenceTAS
GenePSMD7AuthorityHGNC:9565Mapping file id5713 NCBI fileEvidenceTAS
GenePSMD8AuthorityHGNC:9566Mapping file id5714 NCBI fileEvidenceTAS
GenePSTPIP1AuthorityHGNC:9580Mapping file id9051 NCBI fileEvidenceTAS
GenePTBP1AuthorityHGNC:9583Mapping file id5725 NCBI fileEvidenceTAS
GenePTENAuthorityHGNC:9588Mapping file id5728 NCBI fileEvidenceTAS
GenePTGES3AuthorityHGNC:16049Mapping file id10728 NCBI fileEvidenceTAS
GenePTK2AuthorityHGNC:9611Mapping file id5747 NCBI fileEvidenceTAS
GenePTPN11AuthorityHGNC:9644Mapping file id5781 NCBI fileEvidenceTAS
GenePTPN12AuthorityHGNC:9645Mapping file id5782 NCBI fileEvidenceTAS
GenePTPN6AuthorityHGNC:9658Mapping file id5777 NCBI fileEvidenceTAS
GenePUF60AuthorityHGNC:17042Mapping file id22827 NCBI fileEvidenceTAS
GenePYCARDAuthorityHGNC:16608Mapping file id29108 NCBI fileEvidenceTAS
GeneQKIAuthorityHGNC:21100Mapping file id9444 NCBI fileEvidenceTAS
GeneRAB5AAuthorityHGNC:9783Mapping file id5868 NCBI fileEvidenceTAS
GeneRAB5BAuthorityHGNC:9784Mapping file id5869 NCBI fileEvidenceTAS
GeneRAB5CAuthorityHGNC:9785Mapping file id5878 NCBI fileEvidenceTAS
GeneRAB7AAuthorityHGNC:9788Mapping file id7879 NCBI fileEvidenceTAS
GeneRAC1AuthorityHGNC:9801Mapping file id5879 NCBI fileEvidenceIEA, TAS
GeneRAC2AuthorityHGNC:9802Mapping file id5880 NCBI fileEvidenceTAS
GeneRAD1AuthorityHGNC:9806Mapping file id5810 NCBI fileEvidenceTAS
GeneRAD17AuthorityHGNC:9807Mapping file id5884 NCBI fileEvidenceTAS
GeneRAD50AuthorityHGNC:9816Mapping file id10111 NCBI fileEvidenceTAS
GeneRAD51AuthorityHGNC:9817Mapping file id5888 NCBI fileEvidenceTAS
GeneRAD51AP1AuthorityHGNC:16956Mapping file id10635 NCBI fileEvidenceTAS
GeneRAD51BAuthorityHGNC:9822Mapping file id5890 NCBI fileEvidenceTAS
GeneRAD51CAuthorityHGNC:9820Mapping file id5889 NCBI fileEvidenceTAS
GeneRAD51DAuthorityHGNC:9823Mapping file id5892 NCBI fileEvidenceTAS
GeneRAD9AAuthorityHGNC:9827Mapping file id5883 NCBI fileEvidenceTAS
GeneRAD9BAuthorityHGNC:21700Mapping file id144715 NCBI fileEvidenceTAS
GeneRAE1AuthorityHGNC:9828Mapping file id8480 NCBI fileEvidenceIEA, TAS
GeneRAF1AuthorityHGNC:9829Mapping file id5894 NCBI fileEvidenceTAS
GeneRANAuthorityHGNC:9846Mapping file id5901 NCBI fileEvidenceTAS
GeneRANBP1AuthorityHGNC:9847Mapping file id5902 NCBI fileEvidenceTAS
GeneRANBP2AuthorityHGNC:9848Mapping file id5903 NCBI fileEvidenceIEA, TAS
GeneRANGAP1AuthorityHGNC:9854Mapping file id5905 NCBI fileEvidenceTAS
GeneRAP1AAuthorityHGNC:9855Mapping file id5906 NCBI fileEvidenceTAS
GeneRAP1BAuthorityHGNC:9857Mapping file id5908 NCBI fileEvidenceTAS
GeneRB1AuthorityHGNC:9884Mapping file id5925 NCBI fileEvidenceIEA, TAS
GeneRBBP4AuthorityHGNC:9887Mapping file id5928 NCBI fileEvidenceTAS
GeneRBBP5AuthorityHGNC:9888Mapping file id5929 NCBI fileEvidenceTAS
GeneRBBP7AuthorityHGNC:9890Mapping file id5931 NCBI fileEvidenceTAS
GeneRBBP8AuthorityHGNC:9891Mapping file id5932 NCBI fileEvidenceTAS
GeneRBM10AuthorityHGNC:9896Mapping file id8241 NCBI fileEvidenceTAS
GeneRBM17AuthorityHGNC:16944Mapping file id84991 NCBI fileEvidenceTAS
GeneRBM22AuthorityHGNC:25503Mapping file id55696 NCBI fileEvidenceTAS
GeneRBM5AuthorityHGNC:9902Mapping file id10181 NCBI fileEvidenceTAS
GeneRBMXAuthorityHGNC:9910Mapping file id27316 NCBI fileEvidenceTAS
GeneRBP1AuthorityHGNC:9919Mapping file id5947 NCBI fileEvidenceTAS
GeneRBP4AuthorityHGNC:9922Mapping file id5950 NCBI fileEvidenceTAS
GeneRBPJAuthorityHGNC:5724Mapping file id3516 NCBI fileEvidenceTAS
GeneRBX1AuthorityHGNC:9928Mapping file id9978 NCBI fileEvidenceTAS
GeneRCAN3AuthorityHGNC:3042Mapping file id11123 NCBI fileEvidenceTAS
GeneRCC1AuthorityHGNC:1913Mapping file id1104 NCBI fileEvidenceTAS
GeneRCOR1AuthorityHGNC:17441Mapping file id23186 NCBI fileEvidenceTAS
GeneRDH12AuthorityHGNC:19977Mapping file id145226 NCBI fileEvidenceTAS
GeneRDH5AuthorityHGNC:9940Mapping file id5959 NCBI fileEvidenceTAS
GeneRELAAuthorityHGNC:9955Mapping file id5970 NCBI fileEvidenceTAS
GeneRESTAuthorityHGNC:9966Mapping file id5978 NCBI fileEvidenceTAS
GeneRETREG1AuthorityHGNC:25964Mapping file id54463 NCBI fileEvidenceTAS
GeneRFC2AuthorityHGNC:9970Mapping file id5982 NCBI fileEvidenceTAS
GeneRFC3AuthorityHGNC:9971Mapping file id5983 NCBI fileEvidenceTAS
GeneRFC4AuthorityHGNC:9972Mapping file id5984 NCBI fileEvidenceTAS
GeneRFC5AuthorityHGNC:9973Mapping file id5985 NCBI fileEvidenceTAS
GeneRFT1AuthorityHGNC:30220Mapping file id91869 NCBI fileEvidenceTAS
GeneRHAGAuthorityHGNC:10006Mapping file id6005 NCBI fileEvidenceTAS
GeneRHBDF2AuthorityHGNC:20788Mapping file id79651 NCBI fileEvidenceTAS
GeneRHNO1AuthorityHGNC:28206Mapping file id83695 NCBI fileEvidenceTAS
GeneRHOGAuthorityHGNC:672Mapping file id391 NCBI fileEvidenceTAS
GeneRICTORAuthorityHGNC:28611Mapping file id253260 NCBI fileEvidenceTAS
GeneRIGIAuthorityHGNC:19102Mapping file id23586 NCBI fileEvidenceTAS
GeneRIPK1AuthorityHGNC:10019Mapping file id8737 NCBI fileEvidenceTAS
GeneRIPK2AuthorityHGNC:10020Mapping file id8767 NCBI fileEvidenceTAS
GeneRIPK3AuthorityHGNC:10021Mapping file id11035 NCBI fileEvidenceTAS
GeneRLBP1AuthorityHGNC:10024Mapping file id6017 NCBI fileEvidenceTAS
GeneRMI1AuthorityHGNC:25764Mapping file id80010 NCBI fileEvidenceTAS
GeneRMI2AuthorityHGNC:28349Mapping file id116028 NCBI fileEvidenceTAS
GeneRNASEKAuthorityHGNC:33911Mapping file id440400 NCBI fileEvidenceTAS

Evidence codes on this page: IEA, TAS, as the mapping file writes them; a row carrying two was written twice by the file, once under each. The mapping file id says which file placed the gene: an NCBI Gene id from NCBI2Reactome_All_Levels.txt, an Ensembl gene id from Ensembl2Reactome_All_Levels.txt. The two files can disagree about a code, so a row's codes are the one file's view. Measured by this site's build over this release on 2026-09-09: of the 138,908 human pathway-gene pairs both files place, 207 (0.149 per cent, over 47 genes) carry TAS in the Ensembl file where the NCBI rows carry IEA alone.

  • Reactome mapping files, the human rows for this pathway · Reactome release 97 · read · Reactome downloads"NCBI2Reactome_All_Levels.txt" and "Ensembl2Reactome_All_Levels.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.

03The hierarchy

Parents and children in this release's hierarchy

Reactome's hierarchy is a graph rather than a tree: a pathway can sit under more than one parent, and the gene counts are each pathway's own placements at every level under it, so a parent's count is not the sum of its children's.

  • Reactome, the human pathway list and hierarchy relationship file · Reactome release 97 · read · Reactome downloads"ReactomePathways.txt" and "ReactomePathwaysRelation.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.