Pathway Human Homo sapiens
Disease
R-HSA-1643685 in Reactome release 97: a top-level pathway, with 2,550 genes placed in it by the mapping files and 12 child pathways in the hierarchy.
The same number in the other species
Reactome writes the mouse and rat events it infers from a human pathway under the human number with the species token. A door opens only where that species' own list in this release holds the id; neither of the other two lists holds it. Whether the event was inferred from this one is what the record says.
01The record
Reactome's own record of this pathway
What this tells you
The pathway list, the hierarchy and the genes on this page are read from the files Reactome publishes for Reactome release 97, built into this site on 2026-09-09: the pathway list, the hierarchy relationship file and the two gene mapping files. The record card is the one live read, Reactome's own record of this pathway.
Reactome's download page describes the mapping files: Mapping files link the source database identifier to the lowest level pathway diagram or subset of the pathway, all levels of the pathway hierarchy or database identifier to all reactions.
[R13] The gene list here is the all-levels mapping of NCBI Gene ids, filled from the all-levels mapping of Ensembl ids where the NCBI file has no row for a gene; each row names which file it came from by the shape of its source id. Each row carries the evidence codes the file writes for it, as written and unranked, and both where the file writes both; no page of Reactome's documentation the survey read defines the codes, so this page does not expand them. A gene id the identity files do not name is kept as the source's own id with no door rather than turned into a symbol.
On citing what a search finds, Reactome says: It should be remembered that while we strive to contain the most current and accurate data, Reactome should not be used in citations where other primary sources of information are available.
[R12] The record card prints the literature Reactome attaches to a curated pathway for that reason. The data are public domain: All data in the Reactome database and files derived from that data are licensed under the Creative Commons Public Domain Dedication (CC0). User may copy, modify, and distribute these data, even for commercial purposes, without asking for permission. Attribution is encouraged but not required.
[R10] The pathway illustrations are licensed apart, under CC BY 4.0, and none is shown here.
A gene on this list is one Reactome places in this pathway in this release, and that is all the row says: it does not say the gene is expressed in a tissue or associated with a disease, which are the other two explorers' questions, read from other sources. Reactome's papers of record are [R01] [R02].
- [R01] Ragueneau E, Gong C, Sinquin P, Sevilla C, Beavers D, Grentner A, et al. (2026). The Reactome Knowledgebase 2026. Nucleic Acids Research 54:D673-D681. PMID 41251150, doi 10.1093/nar/gkaf1223.
- [R02] Milacic M, Beavers D, Conley P, Gong C, Gillespie M, Griss J, et al. (2024). The Reactome Pathway Knowledgebase 2024. Nucleic Acids Research 52:D672-D678. PMID 37941124, doi 10.1093/nar/gkad1025.
- [R10] Reactome, reactome.org. License Agreement. https://reactome.org/license, read 2026-09-09.
- [R12] Reactome, reactome.org. Citing us. https://reactome.org/cite, read 2026-09-09.
- [R13] Reactome, reactome.org. Download. https://reactome.org/download-data, read 2026-09-09.
02The genes
Genes Reactome places in this human pathway
The mapping files place 2,550 genes in this human pathway; showing 101 to 200, in pages of 100, sorted by symbol for reading. The order carries no ranking.
| Gene | Authority id | Mapping file id | Evidence codes |
|---|---|---|---|
| GeneANAPC15 | AuthorityHGNC:24531 | Mapping file id25906 NCBI file | EvidenceTAS |
| GeneANAPC16 | AuthorityHGNC:26976 | Mapping file id119504 NCBI file | EvidenceTAS |
| GeneANAPC2 | AuthorityHGNC:19989 | Mapping file id29882 NCBI file | EvidenceTAS |
| GeneANAPC4 | AuthorityHGNC:19990 | Mapping file id29945 NCBI file | EvidenceTAS |
| GeneANAPC5 | AuthorityHGNC:15713 | Mapping file id51433 NCBI file | EvidenceTAS |
| GeneANAPC7 | AuthorityHGNC:17380 | Mapping file id51434 NCBI file | EvidenceTAS |
| GeneANO1 | AuthorityHGNC:21625 | Mapping file id55107 NCBI file | EvidenceTAS |
| GeneANO10 | AuthorityHGNC:25519 | Mapping file id55129 NCBI file | EvidenceTAS |
| GeneANO2 | AuthorityHGNC:1183 | Mapping file id57101 NCBI file | EvidenceTAS |
| GeneANO3 | AuthorityHGNC:14004 | Mapping file id63982 NCBI file | EvidenceTAS |
| GeneANO4 | AuthorityHGNC:23837 | Mapping file id121601 NCBI file | EvidenceTAS |
| GeneANO5 | AuthorityHGNC:27337 | Mapping file id203859 NCBI file | EvidenceTAS |
| GeneANO6 | AuthorityHGNC:25240 | Mapping file id196527 NCBI file | EvidenceTAS |
| GeneANO7 | AuthorityHGNC:31677 | Mapping file id50636 NCBI file | EvidenceTAS |
| GeneANO8 | AuthorityHGNC:29329 | Mapping file id57719 NCBI file | EvidenceTAS |
| GeneANO9 | AuthorityHGNC:20679 | Mapping file id338440 NCBI file | EvidenceTAS |
| GeneANTXR1 | AuthorityHGNC:21014 | Mapping file id84168 NCBI file | EvidenceTAS |
| GeneANTXR2 | AuthorityHGNC:21732 | Mapping file id118429 NCBI file | EvidenceTAS |
| GeneAP1B1 | AuthorityHGNC:554 | Mapping file id162 NCBI file | EvidenceTAS |
| GeneAP1G1 | AuthorityHGNC:555 | Mapping file id164 NCBI file | EvidenceTAS |
| GeneAP1M1 | AuthorityHGNC:13667 | Mapping file id8907 NCBI file | EvidenceTAS |
| GeneAP1M2 | AuthorityHGNC:558 | Mapping file id10053 NCBI file | EvidenceTAS |
| GeneAP1S1 | AuthorityHGNC:559 | Mapping file id1174 NCBI file | EvidenceTAS |
| GeneAP1S2 | AuthorityHGNC:560 | Mapping file id8905 NCBI file | EvidenceTAS |
| GeneAP1S3 | AuthorityHGNC:18971 | Mapping file id130340 NCBI file | EvidenceTAS |
| GeneAP2A1 | AuthorityHGNC:561 | Mapping file id160 NCBI file | EvidenceTAS |
| GeneAP2A2 | AuthorityHGNC:562 | Mapping file id161 NCBI file | EvidenceTAS |
| GeneAP2B1 | AuthorityHGNC:563 | Mapping file id163 NCBI file | EvidenceTAS |
| GeneAP2M1 | AuthorityHGNC:564 | Mapping file id1173 NCBI file | EvidenceTAS |
| GeneAP2S1 | AuthorityHGNC:565 | Mapping file id1175 NCBI file | EvidenceTAS |
| GeneAP3B1 | AuthorityHGNC:566 | Mapping file id8546 NCBI file | EvidenceTAS |
| GeneAPBB1IP | AuthorityHGNC:17379 | Mapping file id54518 NCBI file | EvidenceTAS |
| GeneAPC | AuthorityHGNC:583 | Mapping file id324 NCBI file | EvidenceTAS |
| GeneAPH1A | AuthorityHGNC:29509 | Mapping file id51107 NCBI file | EvidenceTAS |
| GeneAPH1B | AuthorityHGNC:24080 | Mapping file id83464 NCBI file | EvidenceTAS |
| GeneAPOA1 | AuthorityHGNC:600 | Mapping file id335 NCBI file | EvidenceTAS |
| GeneAPOBEC3G | AuthorityHGNC:17357 | Mapping file id60489 NCBI file | EvidenceTAS |
| GeneAPP | AuthorityHGNC:620 | Mapping file id351 NCBI file | EvidenceTAS |
| GeneAPRT | AuthorityHGNC:626 | Mapping file id353 NCBI file | EvidenceTAS |
| GeneAQR | AuthorityHGNC:29513 | Mapping file id9716 NCBI file | EvidenceTAS |
| GeneARAF | AuthorityHGNC:646 | Mapping file id369 NCBI file | EvidenceTAS |
| GeneAREG | AuthorityHGNC:651 | Mapping file id374 NCBI file | EvidenceTAS |
| GeneARF1 | AuthorityHGNC:652 | Mapping file id375 NCBI file | EvidenceTAS |
| GeneARG1 | AuthorityHGNC:663 | Mapping file id383 NCBI file | EvidenceTAS |
| GeneARID4A | AuthorityHGNC:9885 | Mapping file id5926 NCBI file | EvidenceTAS |
| GeneARID4B | AuthorityHGNC:15550 | Mapping file id51742 NCBI file | EvidenceTAS |
| GeneARIH1 | AuthorityHGNC:689 | Mapping file id25820 NCBI file | EvidenceTAS |
| GeneARPC1A | AuthorityHGNC:703 | Mapping file id10552 NCBI file | EvidenceIEA, TAS |
| GeneARPC1B | AuthorityHGNC:704 | Mapping file id10095 NCBI file | EvidenceIEA, TAS |
| GeneARPC2 | AuthorityHGNC:705 | Mapping file id10109 NCBI file | EvidenceIEA, TAS |
| GeneARPC3 | AuthorityHGNC:706 | Mapping file id10094 NCBI file | EvidenceIEA, TAS |
| GeneARPC4 | AuthorityHGNC:707 | Mapping file id10093 NCBI file | EvidenceIEA, TAS |
| GeneARPC5 | AuthorityHGNC:708 | Mapping file id10092 NCBI file | EvidenceIEA, TAS |
| GeneARRB1 | AuthorityHGNC:711 | Mapping file id408 NCBI file | EvidenceTAS |
| GeneARRB2 | AuthorityHGNC:712 | Mapping file id409 NCBI file | EvidenceTAS |
| GeneARSB | AuthorityHGNC:714 | Mapping file id411 NCBI file | EvidenceTAS |
| GeneASH2L | AuthorityHGNC:744 | Mapping file id9070 NCBI file | EvidenceTAS |
| GeneASL | AuthorityHGNC:746 | Mapping file id435 NCBI file | EvidenceTAS |
| GeneASS1 | AuthorityHGNC:758 | Mapping file id445 NCBI file | EvidenceTAS |
| GeneATG14 | AuthorityHGNC:19962 | Mapping file id22863 NCBI file | EvidenceTAS |
| GeneATG7 | AuthorityHGNC:16935 | Mapping file id10533 NCBI file | EvidenceTAS |
| GeneATIC | AuthorityHGNC:794 | Mapping file id471 NCBI file | EvidenceTAS |
| GeneATL2 | AuthorityHGNC:24047 | Mapping file id64225 NCBI file | EvidenceTAS |
| GeneATM | AuthorityHGNC:795 | Mapping file id472 NCBI file | EvidenceTAS |
| GeneATP1A1 | AuthorityHGNC:799 | Mapping file id476 NCBI file | EvidenceTAS |
| GeneATP1A2 | AuthorityHGNC:800 | Mapping file id477 NCBI file | EvidenceTAS |
| GeneATP1A3 | AuthorityHGNC:801 | Mapping file id478 NCBI file | EvidenceTAS |
| GeneATP1A4 | AuthorityHGNC:14073 | Mapping file id480 NCBI file | EvidenceTAS |
| GeneATP1B1 | AuthorityHGNC:804 | Mapping file id481 NCBI file | EvidenceTAS |
| GeneATP1B2 | AuthorityHGNC:805 | Mapping file id482 NCBI file | EvidenceTAS |
| GeneATP1B3 | AuthorityHGNC:806 | Mapping file id483 NCBI file | EvidenceTAS |
| GeneATP6V1H | AuthorityHGNC:18303 | Mapping file id51606 NCBI file | EvidenceTAS |
| GeneATR | AuthorityHGNC:882 | Mapping file id545 NCBI file | EvidenceTAS |
| GeneATRIP | AuthorityHGNC:33499 | Mapping file id84126 NCBI file | EvidenceTAS |
| GeneATRX | AuthorityHGNC:886 | Mapping file id546 NCBI file | EvidenceTAS |
| GeneAUH | AuthorityHGNC:890 | Mapping file id549 NCBI file | EvidenceTAS |
| GeneAUP1 | AuthorityHGNC:891 | Mapping file id550 NCBI file | EvidenceTAS |
| GeneAVP | AuthorityHGNC:894 | Mapping file id551 NCBI file | EvidenceTAS |
| GeneAVPR1A | AuthorityHGNC:895 | Mapping file id552 NCBI file | EvidenceTAS |
| GeneAVPR1B | AuthorityHGNC:896 | Mapping file id553 NCBI file | EvidenceTAS |
| GeneAVPR2 | AuthorityHGNC:897 | Mapping file id554 NCBI file | EvidenceTAS |
| GeneAXIN1 | AuthorityHGNC:903 | Mapping file id8312 NCBI file | EvidenceTAS |
| GeneAXL | AuthorityHGNC:905 | Mapping file id558 NCBI file | EvidenceTAS |
| GeneB2M | AuthorityHGNC:914 | Mapping file id567 NCBI file | EvidenceTAS |
| GeneB3GALT6 | AuthorityHGNC:17978 | Mapping file id126792 NCBI file | EvidenceTAS |
| GeneB3GAT3 | AuthorityHGNC:923 | Mapping file id26229 NCBI file | EvidenceTAS |
| GeneB3GLCT | AuthorityHGNC:20207 | Mapping file id145173 NCBI file | EvidenceTAS |
| GeneB4GALT1 | AuthorityHGNC:924 | Mapping file id2683 NCBI file | EvidenceTAS |
| GeneB4GALT7 | AuthorityHGNC:930 | Mapping file id11285 NCBI file | EvidenceTAS |
| GeneB4GAT1 | AuthorityHGNC:15685 | Mapping file id11041 NCBI file | EvidenceTAS |
| GeneBAD | AuthorityHGNC:936 | Mapping file id572 NCBI file | EvidenceTAS |
| GeneBAG2 | AuthorityHGNC:938 | Mapping file id9532 NCBI file | EvidenceTAS |
| GeneBAG4 | AuthorityHGNC:940 | Mapping file id9530 NCBI file | EvidenceTAS |
| GeneBAIAP2 | AuthorityHGNC:947 | Mapping file id10458 NCBI file | EvidenceIEA, TAS |
| GeneBANF1 | AuthorityHGNC:17397 | Mapping file id8815 NCBI file | EvidenceTAS |
| GeneBARD1 | AuthorityHGNC:952 | Mapping file id580 NCBI file | EvidenceTAS |
| GeneBCAN | AuthorityHGNC:23059 | Mapping file id63827 NCBI file | EvidenceTAS |
| GeneBCAP31 | AuthorityHGNC:16695 | Mapping file id10134 NCBI file | EvidenceTAS |
| GeneBCAS2 | AuthorityHGNC:975 | Mapping file id10286 NCBI file | EvidenceTAS |
| GeneBCKDHA | AuthorityHGNC:986 | Mapping file id593 NCBI file | EvidenceTAS |
Evidence codes on this page: IEA, TAS, as the mapping file writes them; a row carrying two was written twice by the file, once under each. The mapping file id says which file placed the gene: an NCBI Gene id from NCBI2Reactome_All_Levels.txt, an Ensembl gene id from Ensembl2Reactome_All_Levels.txt. The two files can disagree about a code, so a row's codes are the one file's view. Measured by this site's build over this release on 2026-09-09: of the 138,908 human pathway-gene pairs both files place, 207 (0.149 per cent, over 47 genes) carry TAS in the Ensembl file where the NCBI rows carry IEA alone.
- Reactome mapping files, the human rows for this pathway · Reactome release 97 · read · Reactome downloads"NCBI2Reactome_All_Levels.txt" and "Ensembl2Reactome_All_Levels.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.
03The hierarchy
Parents and children in this release's hierarchy
Parents
None: this is a top-level pathway of the release.
Children
- Diseases of cellular response to stressR-HSA-96751323 genes
- Diseases of DNA repairR-HSA-967513551 genes
- Diseases of hemostasisR-HSA-967179324 genes
- Diseases of Immune SystemR-HSA-526027139 genes
- Diseases of metabolismR-HSA-5668914272 genes
- Diseases of mitotic cell cycleR-HSA-967512638 genes
- Diseases of programmed cell deathR-HSA-9645723108 genes
- Diseases of signal transduction by growth factor receptors and second messengersR-HSA-5663202456 genes
- Diseases of the neuronal systemR-HSA-967514314 genes
- Disorders of Developmental BiologyR-HSA-967515120 genes
- Disorders of transmembrane transportersR-HSA-5619115163 genes
- Infectious diseaseR-HSA-56632051,731 genes
Reactome's hierarchy is a graph rather than a tree: a pathway can sit under more than one parent, and the gene counts are each pathway's own placements at every level under it, so a parent's count is not the sum of its children's.
- Reactome, the human pathway list and hierarchy relationship file · Reactome release 97 · read · Reactome downloads"ReactomePathways.txt" and "ReactomePathwaysRelation.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.