Pathway Human Homo sapiens
Disease
R-HSA-1643685 in Reactome release 97: a top-level pathway, with 2,550 genes placed in it by the mapping files and 12 child pathways in the hierarchy.
The same number in the other species
Reactome writes the mouse and rat events it infers from a human pathway under the human number with the species token. A door opens only where that species' own list in this release holds the id; neither of the other two lists holds it. Whether the event was inferred from this one is what the record says.
01The record
Reactome's own record of this pathway
What this tells you
The pathway list, the hierarchy and the genes on this page are read from the files Reactome publishes for Reactome release 97, built into this site on 2026-09-09: the pathway list, the hierarchy relationship file and the two gene mapping files. The record card is the one live read, Reactome's own record of this pathway.
Reactome's download page describes the mapping files: Mapping files link the source database identifier to the lowest level pathway diagram or subset of the pathway, all levels of the pathway hierarchy or database identifier to all reactions.
[R13] The gene list here is the all-levels mapping of NCBI Gene ids, filled from the all-levels mapping of Ensembl ids where the NCBI file has no row for a gene; each row names which file it came from by the shape of its source id. Each row carries the evidence codes the file writes for it, as written and unranked, and both where the file writes both; no page of Reactome's documentation the survey read defines the codes, so this page does not expand them. A gene id the identity files do not name is kept as the source's own id with no door rather than turned into a symbol.
On citing what a search finds, Reactome says: It should be remembered that while we strive to contain the most current and accurate data, Reactome should not be used in citations where other primary sources of information are available.
[R12] The record card prints the literature Reactome attaches to a curated pathway for that reason. The data are public domain: All data in the Reactome database and files derived from that data are licensed under the Creative Commons Public Domain Dedication (CC0). User may copy, modify, and distribute these data, even for commercial purposes, without asking for permission. Attribution is encouraged but not required.
[R10] The pathway illustrations are licensed apart, under CC BY 4.0, and none is shown here.
A gene on this list is one Reactome places in this pathway in this release, and that is all the row says: it does not say the gene is expressed in a tissue or associated with a disease, which are the other two explorers' questions, read from other sources. Reactome's papers of record are [R01] [R02].
- [R01] Ragueneau E, Gong C, Sinquin P, Sevilla C, Beavers D, Grentner A, et al. (2026). The Reactome Knowledgebase 2026. Nucleic Acids Research 54:D673-D681. PMID 41251150, doi 10.1093/nar/gkaf1223.
- [R02] Milacic M, Beavers D, Conley P, Gong C, Gillespie M, Griss J, et al. (2024). The Reactome Pathway Knowledgebase 2024. Nucleic Acids Research 52:D672-D678. PMID 37941124, doi 10.1093/nar/gkad1025.
- [R10] Reactome, reactome.org. License Agreement. https://reactome.org/license, read 2026-09-09.
- [R12] Reactome, reactome.org. Citing us. https://reactome.org/cite, read 2026-09-09.
- [R13] Reactome, reactome.org. Download. https://reactome.org/download-data, read 2026-09-09.
02The genes
Genes Reactome places in this human pathway
The mapping files place 2,550 genes in this human pathway; showing 1,901 to 2,000, in pages of 100, sorted by symbol for reading. The order carries no ranking.
| Gene | Authority id | Mapping file id | Evidence codes |
|---|---|---|---|
| GeneSTAT5A | AuthorityHGNC:11366 | Mapping file id6776 NCBI file | EvidenceTAS |
| GeneSTAT5B | AuthorityHGNC:11367 | Mapping file id6777 NCBI file | EvidenceTAS |
| GeneSTING1 | AuthorityHGNC:27962 | Mapping file id340061 NCBI file | EvidenceTAS |
| GeneSTRA6 | AuthorityHGNC:30650 | Mapping file id64220 NCBI file | EvidenceTAS |
| GeneSTRN | AuthorityHGNC:11424 | Mapping file id6801 NCBI file | EvidenceTAS |
| GeneSTT3A | AuthorityHGNC:6172 | Mapping file id3703 NCBI file | EvidenceTAS |
| GeneSTT3B | AuthorityHGNC:30611 | Mapping file id201595 NCBI file | EvidenceTAS |
| GeneSTX1A | AuthorityHGNC:11433 | Mapping file id6804 NCBI file | EvidenceTAS |
| GeneSTX1B | AuthorityHGNC:18539 | Mapping file id112755 NCBI file | EvidenceTAS |
| GeneSUDS3 | AuthorityHGNC:29545 | Mapping file id64426 NCBI file | EvidenceTAS |
| GeneSUGP1 | AuthorityHGNC:18643 | Mapping file id57794 NCBI file | EvidenceTAS |
| GeneSUGT1 | AuthorityHGNC:16987 | Mapping file id10910 NCBI file | EvidenceTAS |
| GeneSUMO1 | AuthorityHGNC:12502 | Mapping file id7341 NCBI file | EvidenceIEA, TAS |
| GeneSUN2 | AuthorityHGNC:14210 | Mapping file id25777 NCBI file | EvidenceTAS |
| GeneSUPT16H | AuthorityHGNC:11465 | Mapping file id11198 NCBI file | EvidenceIEA |
| GeneSUPT4H1 | AuthorityHGNC:11467 | Mapping file id6827 NCBI file | EvidenceIEA, TAS |
| GeneSUPT5H | AuthorityHGNC:11469 | Mapping file id6829 NCBI file | EvidenceIEA, TAS |
| GeneSUZ12 | AuthorityHGNC:17101 | Mapping file id23512 NCBI file | EvidenceTAS |
| GeneSV2A | AuthorityHGNC:20566 | Mapping file id9900 NCBI file | EvidenceTAS |
| GeneSV2B | AuthorityHGNC:16874 | Mapping file id9899 NCBI file | EvidenceTAS |
| GeneSV2C | AuthorityHGNC:30670 | Mapping file id22987 NCBI file | EvidenceTAS |
| GeneSYK | AuthorityHGNC:11491 | Mapping file id6850 NCBI file | EvidenceTAS |
| GeneSYMPK | AuthorityHGNC:22935 | Mapping file id8189 NCBI file | EvidenceTAS |
| GeneSYT1 | AuthorityHGNC:11509 | Mapping file id6857 NCBI file | EvidenceTAS |
| GeneSYT2 | AuthorityHGNC:11510 | Mapping file id127833 NCBI file | EvidenceTAS |
| GeneSYVN1 | AuthorityHGNC:20738 | Mapping file id84447 NCBI file | EvidenceTAS |
| GeneTAB1 | AuthorityHGNC:18157 | Mapping file id10454 NCBI file | EvidenceTAS |
| GeneTAB2 | AuthorityHGNC:17075 | Mapping file id23118 NCBI file | EvidenceTAS |
| GeneTAB3 | AuthorityHGNC:30681 | Mapping file id257397 NCBI file | EvidenceTAS |
| GeneTAF1 | AuthorityHGNC:11535 | Mapping file id6872 NCBI file | EvidenceIEA |
| GeneTAF10 | AuthorityHGNC:11543 | Mapping file id6881 NCBI file | EvidenceIEA |
| GeneTAF11 | AuthorityHGNC:11544 | Mapping file id6882 NCBI file | EvidenceIEA |
| GeneTAF12 | AuthorityHGNC:11545 | Mapping file id6883 NCBI file | EvidenceIEA |
| GeneTAF13 | AuthorityHGNC:11546 | Mapping file id6884 NCBI file | EvidenceIEA |
| GeneTAF15 | AuthorityHGNC:11547 | Mapping file id8148 NCBI file | EvidenceIEA |
| GeneTAF1L | AuthorityHGNC:18056 | Mapping file id138474 NCBI file | EvidenceIEA |
| GeneTAF2 | AuthorityHGNC:11536 | Mapping file id6873 NCBI file | EvidenceIEA |
| GeneTAF3 | AuthorityHGNC:17303 | Mapping file id83860 NCBI file | EvidenceIEA |
| GeneTAF4 | AuthorityHGNC:11537 | Mapping file id6874 NCBI file | EvidenceIEA |
| GeneTAF4B | AuthorityHGNC:11538 | Mapping file id6875 NCBI file | EvidenceIEA |
| GeneTAF5 | AuthorityHGNC:11539 | Mapping file id6877 NCBI file | EvidenceIEA |
| GeneTAF6 | AuthorityHGNC:11540 | Mapping file id6878 NCBI file | EvidenceIEA |
| GeneTAF7 | AuthorityHGNC:11541 | Mapping file id6879 NCBI file | EvidenceIEA |
| GeneTAF7L | AuthorityHGNC:11548 | Mapping file id54457 NCBI file | EvidenceIEA |
| GeneTAF8 | AuthorityHGNC:17300 | Mapping file id129685 NCBI file | EvidenceIEA |
| GeneTAF9 | AuthorityHGNC:11542 | Mapping file id6880 NCBI file | EvidenceIEA |
| GeneTAF9B | AuthorityHGNC:17306 | Mapping file id51616 NCBI file | EvidenceIEA |
| GeneTAL1 | AuthorityHGNC:11556 | Mapping file id6886 NCBI file | EvidenceTAS |
| GeneTALDO1 | AuthorityHGNC:11559 | Mapping file id6888 NCBI file | EvidenceTAS |
| GeneTAOK1 | AuthorityHGNC:29259 | Mapping file id57551 NCBI file | EvidenceTAS |
| GeneTBK1 | AuthorityHGNC:11584 | Mapping file id29110 NCBI file | EvidenceTAS |
| GeneTBL1X | AuthorityHGNC:11585 | Mapping file id6907 NCBI file | EvidenceIEA, TAS |
| GeneTBL1XR1 | AuthorityHGNC:29529 | Mapping file id79718 NCBI file | EvidenceIEA, TAS |
| GeneTBP | AuthorityHGNC:11588 | Mapping file id6908 NCBI file | EvidenceIEA |
| GeneTBXAS1 | AuthorityHGNC:11609 | Mapping file id6916 NCBI file | EvidenceTAS |
| GeneTCEA1 | AuthorityHGNC:11612 | Mapping file id6917 NCBI file | EvidenceIEA |
| GeneTCF7L2 | AuthorityHGNC:11641 | Mapping file id6934 NCBI file | EvidenceTAS |
| GeneTCN2 | AuthorityHGNC:11653 | Mapping file id6948 NCBI file | EvidenceTAS |
| GeneTENT4A | AuthorityHGNC:16705 | Mapping file id11044 NCBI file | EvidenceTAS |
| GeneTFDP1 | AuthorityHGNC:11749 | Mapping file id7027 NCBI file | EvidenceTAS |
| GeneTFDP2 | AuthorityHGNC:11751 | Mapping file id7029 NCBI file | EvidenceTAS |
| GeneTFG | AuthorityHGNC:11758 | Mapping file id10342 NCBI file | EvidenceTAS |
| GeneTGFA | AuthorityHGNC:11765 | Mapping file id7039 NCBI file | EvidenceTAS |
| GeneTGFB1 | AuthorityHGNC:11766 | Mapping file id7040 NCBI file | EvidenceTAS |
| GeneTGFBR1 | AuthorityHGNC:11772 | Mapping file id7046 NCBI file | EvidenceTAS |
| GeneTGFBR2 | AuthorityHGNC:11773 | Mapping file id7048 NCBI file | EvidenceTAS |
| GeneTHBS1 | AuthorityHGNC:11785 | Mapping file id7057 NCBI file | EvidenceTAS |
| GeneTHBS2 | AuthorityHGNC:11786 | Mapping file id7058 NCBI file | EvidenceTAS |
| GeneTHSD1 | AuthorityHGNC:17754 | Mapping file id55901 NCBI file | EvidenceTAS |
| GeneTHSD4 | AuthorityHGNC:25835 | Mapping file id79875 NCBI file | EvidenceTAS |
| GeneTHSD7A | AuthorityHGNC:22207 | Mapping file id221981 NCBI file | EvidenceTAS |
| GeneTHSD7B | AuthorityHGNC:29348 | Mapping file id80731 NCBI file | EvidenceTAS |
| GeneTICAM1 | AuthorityHGNC:18348 | Mapping file id148022 NCBI file | EvidenceTAS |
| GeneTIMD4 | AuthorityHGNC:25132 | Mapping file id91937 NCBI file | EvidenceTAS |
| GeneTIRAP | AuthorityHGNC:17192 | Mapping file id114609 NCBI file | EvidenceTAS |
| GeneTJP1 | AuthorityHGNC:11827 | Mapping file id7082 NCBI file | EvidenceIEA, TAS |
| GeneTKFC | AuthorityHGNC:24552 | Mapping file id26007 NCBI file | EvidenceIEA, TAS |
| GeneTLN1 | AuthorityHGNC:11845 | Mapping file id7094 NCBI file | EvidenceTAS |
| GeneTLR1 | AuthorityHGNC:11847 | Mapping file id7096 NCBI file | EvidenceTAS |
| GeneTLR10 | AuthorityHGNC:15634 | Mapping file id81793 NCBI file | EvidenceTAS |
| GeneTLR2 | AuthorityHGNC:11848 | Mapping file id7097 NCBI file | EvidenceTAS |
| GeneTLR3 | AuthorityHGNC:11849 | Mapping file id7098 NCBI file | EvidenceTAS |
| GeneTLR4 | AuthorityHGNC:11850 | Mapping file id7099 NCBI file | EvidenceTAS |
| GeneTLR5 | AuthorityHGNC:11851 | Mapping file id7100 NCBI file | EvidenceTAS |
| GeneTLR6 | AuthorityHGNC:16711 | Mapping file id10333 NCBI file | EvidenceTAS |
| GeneTLR7 | AuthorityHGNC:15631 | Mapping file id51284 NCBI file | EvidenceTAS |
| GeneTLR8 | AuthorityHGNC:15632 | Mapping file id51311 NCBI file | EvidenceTAS |
| GeneTLR9 | AuthorityHGNC:15633 | Mapping file id54106 NCBI file | EvidenceTAS |
| GeneTMEM258 | AuthorityHGNC:1164 | Mapping file id746 NCBI file | EvidenceTAS |
| GeneTMPRSS2 | AuthorityHGNC:11876 | Mapping file id7113 NCBI file | EvidenceTAS |
| GeneTNKS | AuthorityHGNC:11941 | Mapping file id8658 NCBI file | EvidenceTAS |
| GeneTNKS2 | AuthorityHGNC:15677 | Mapping file id80351 NCBI file | EvidenceTAS |
| GeneTNRC6C | AuthorityHGNC:29318 | Mapping file id57690 NCBI file | EvidenceTAS |
| GeneTOMM70 | AuthorityHGNC:11985 | Mapping file id9868 NCBI file | EvidenceTAS |
| GeneTOP3A | AuthorityHGNC:11992 | Mapping file id7156 NCBI file | EvidenceTAS |
| GeneTOPBP1 | AuthorityHGNC:17008 | Mapping file id11073 NCBI file | EvidenceTAS |
| GeneTP53 | AuthorityHGNC:11998 | Mapping file id7157 NCBI file | EvidenceTAS |
| GeneTPM3 | AuthorityHGNC:12012 | Mapping file id7170 NCBI file | EvidenceTAS |
| GeneTPM4 | AuthorityHGNC:12013 | Mapping file id7171 NCBI file | EvidenceTAS |
| GeneTPMT | AuthorityHGNC:12014 | Mapping file id7172 NCBI file | EvidenceTAS |
Evidence codes on this page: IEA, TAS, as the mapping file writes them; a row carrying two was written twice by the file, once under each. The mapping file id says which file placed the gene: an NCBI Gene id from NCBI2Reactome_All_Levels.txt, an Ensembl gene id from Ensembl2Reactome_All_Levels.txt. The two files can disagree about a code, so a row's codes are the one file's view. Measured by this site's build over this release on 2026-09-09: of the 138,908 human pathway-gene pairs both files place, 207 (0.149 per cent, over 47 genes) carry TAS in the Ensembl file where the NCBI rows carry IEA alone.
- Reactome mapping files, the human rows for this pathway · Reactome release 97 · read · Reactome downloads"NCBI2Reactome_All_Levels.txt" and "Ensembl2Reactome_All_Levels.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.
03The hierarchy
Parents and children in this release's hierarchy
Parents
None: this is a top-level pathway of the release.
Children
- Diseases of cellular response to stressR-HSA-96751323 genes
- Diseases of DNA repairR-HSA-967513551 genes
- Diseases of hemostasisR-HSA-967179324 genes
- Diseases of Immune SystemR-HSA-526027139 genes
- Diseases of metabolismR-HSA-5668914272 genes
- Diseases of mitotic cell cycleR-HSA-967512638 genes
- Diseases of programmed cell deathR-HSA-9645723108 genes
- Diseases of signal transduction by growth factor receptors and second messengersR-HSA-5663202456 genes
- Diseases of the neuronal systemR-HSA-967514314 genes
- Disorders of Developmental BiologyR-HSA-967515120 genes
- Disorders of transmembrane transportersR-HSA-5619115163 genes
- Infectious diseaseR-HSA-56632051,731 genes
Reactome's hierarchy is a graph rather than a tree: a pathway can sit under more than one parent, and the gene counts are each pathway's own placements at every level under it, so a parent's count is not the sum of its children's.
- Reactome, the human pathway list and hierarchy relationship file · Reactome release 97 · read · Reactome downloads"ReactomePathways.txt" and "ReactomePathwaysRelation.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.