Skip to content

Create an account and get up to 25% off.

Order

Pathway Human Homo sapiens

Metabolism of lipids

R-HSA-556833 in Reactome release 97: under Metabolism, with 758 genes placed in it by the mapping files and 10 child pathways in the hierarchy.

The same number in the other species

Reactome writes the mouse and rat events it infers from a human pathway under the human number with the species token. A door opens only where that species' own list in this release holds the id: R-MMU-556833 (mouse), R-RNO-556833 (rat). Whether the event was inferred from this one is what the record says.

01The record

Reactome's own record of this pathway

What this tells you

The pathway list, the hierarchy and the genes on this page are read from the files Reactome publishes for Reactome release 97, built into this site on 2026-09-09: the pathway list, the hierarchy relationship file and the two gene mapping files. The record card is the one live read, Reactome's own record of this pathway.

Reactome's download page describes the mapping files: Mapping files link the source database identifier to the lowest level pathway diagram or subset of the pathway, all levels of the pathway hierarchy or database identifier to all reactions. [R13] The gene list here is the all-levels mapping of NCBI Gene ids, filled from the all-levels mapping of Ensembl ids where the NCBI file has no row for a gene; each row names which file it came from by the shape of its source id. Each row carries the evidence codes the file writes for it, as written and unranked, and both where the file writes both; no page of Reactome's documentation the survey read defines the codes, so this page does not expand them. A gene id the identity files do not name is kept as the source's own id with no door rather than turned into a symbol.

On citing what a search finds, Reactome says: It should be remembered that while we strive to contain the most current and accurate data, Reactome should not be used in citations where other primary sources of information are available. [R12] The record card prints the literature Reactome attaches to a curated pathway for that reason. The data are public domain: All data in the Reactome database and files derived from that data are licensed under the Creative Commons Public Domain Dedication (CC0). User may copy, modify, and distribute these data, even for commercial purposes, without asking for permission. Attribution is encouraged but not required. [R10] The pathway illustrations are licensed apart, under CC BY 4.0, and none is shown here.

A gene on this list is one Reactome places in this pathway in this release, and that is all the row says: it does not say the gene is expressed in a tissue or associated with a disease, which are the other two explorers' questions, read from other sources. Reactome's papers of record are [R01] [R02].

  1. [R01] Ragueneau E, Gong C, Sinquin P, Sevilla C, Beavers D, Grentner A, et al. (2026). The Reactome Knowledgebase 2026. Nucleic Acids Research 54:D673-D681. PMID 41251150, doi 10.1093/nar/gkaf1223.
  2. [R02] Milacic M, Beavers D, Conley P, Gong C, Gillespie M, Griss J, et al. (2024). The Reactome Pathway Knowledgebase 2024. Nucleic Acids Research 52:D672-D678. PMID 37941124, doi 10.1093/nar/gkad1025.
  3. [R10] Reactome, reactome.org. License Agreement. https://reactome.org/license, read 2026-09-09.
  4. [R12] Reactome, reactome.org. Citing us. https://reactome.org/cite, read 2026-09-09.
  5. [R13] Reactome, reactome.org. Download. https://reactome.org/download-data, read 2026-09-09.
Reading this pathway's record from Reactome (the pathway record).Still reading. A first read of a pathway can take a while; this page waits up to 35 seconds for it, and its scripts then bring in the panel, or a line saying what did not arrive.

02The genes

Genes Reactome places in this human pathway

The mapping files place 758 genes in this human pathway; showing 301 to 400, in pages of 100, sorted by symbol for reading. The order carries no ranking.

Genes Reactome places in this human pathway, page 4 of 8
GeneGPAMAuthorityHGNC:24865Mapping file id57678 NCBI fileEvidenceTAS
GeneGPAT2AuthorityHGNC:27168Mapping file id150763 NCBI fileEvidenceTAS
GeneGPAT3AuthorityHGNC:28157Mapping file id84803 NCBI fileEvidenceTAS
GeneGPAT4AuthorityHGNC:20880Mapping file id137964 NCBI fileEvidenceTAS
GeneGPCPD1AuthorityHGNC:26957Mapping file id56261 NCBI fileEvidenceIEA
GeneGPD1AuthorityHGNC:4455Mapping file id2819 NCBI fileEvidenceTAS
GeneGPD1LAuthorityHGNC:28956Mapping file id23171 NCBI fileEvidenceTAS
GeneGPD2AuthorityHGNC:4456Mapping file id2820 NCBI fileEvidenceTAS
GeneGPS2AuthorityHGNC:4550Mapping file id2874 NCBI fileEvidenceTAS
GeneGPX1AuthorityHGNC:4553Mapping file id2876 NCBI fileEvidenceIEA, TAS
GeneGPX2AuthorityHGNC:4554Mapping file id2877 NCBI fileEvidenceIEA, TAS
GeneGPX4AuthorityHGNC:4556Mapping file id2879 NCBI fileEvidenceIEA, TAS
GeneGRHL1AuthorityHGNC:17923Mapping file id29841 NCBI fileEvidenceTAS
GeneGSTM4AuthorityHGNC:4636Mapping file id2948 NCBI fileEvidenceTAS
GeneHACD1AuthorityHGNC:9639Mapping file id9200 NCBI fileEvidenceTAS
GeneHACD2AuthorityHGNC:9640Mapping file id201562 NCBI fileEvidenceTAS
GeneHACD3AuthorityHGNC:24175Mapping file id51495 NCBI fileEvidenceTAS
GeneHACD4AuthorityHGNC:20920Mapping file id401494 NCBI fileEvidenceTAS
GeneHACL1AuthorityHGNC:17856Mapping file id26061 NCBI fileEvidenceTAS
GeneHADHAuthorityHGNC:4799Mapping file id3033 NCBI fileEvidenceTAS
GeneHADHAAuthorityHGNC:4801Mapping file id3030 NCBI fileEvidenceTAS
GeneHADHBAuthorityHGNC:4803Mapping file id3032 NCBI fileEvidenceTAS
GeneHAO2AuthorityHGNC:4810Mapping file id51179 NCBI fileEvidenceTAS
GeneHDAC3AuthorityHGNC:4854Mapping file id8841 NCBI fileEvidenceIEA, TAS
GeneHELZ2AuthorityHGNC:30021Mapping file id85441 NCBI fileEvidenceIEA, TAS
GeneHEXAAuthorityHGNC:4878Mapping file id3073 NCBI fileEvidenceTAS
GeneHEXBAuthorityHGNC:4879Mapping file id3074 NCBI fileEvidenceTAS
GeneHILPDAAuthorityHGNC:28859Mapping file id29923 NCBI fileEvidenceTAS
GeneHMGCLAuthorityHGNC:5005Mapping file id3155 NCBI fileEvidenceTAS
GeneHMGCLL1AuthorityHGNC:21359Mapping file id54511 NCBI fileEvidenceTAS
GeneHMGCRAuthorityHGNC:5006Mapping file id3156 NCBI fileEvidenceTAS
GeneHMGCS1AuthorityHGNC:5007Mapping file id3157 NCBI fileEvidenceTAS
GeneHMGCS2AuthorityHGNC:5008Mapping file id3158 NCBI fileEvidenceTAS
GeneHPGDAuthorityHGNC:5154Mapping file id3248 NCBI fileEvidenceIEA, TAS
GeneHPGDSAuthorityHGNC:17890Mapping file id27306 NCBI fileEvidenceTAS
GeneHSD11B1AuthorityHGNC:5208Mapping file id3290 NCBI fileEvidenceTAS
GeneHSD11B2AuthorityHGNC:5209Mapping file id3291 NCBI fileEvidenceTAS
GeneHSD17B1AuthorityHGNC:5210Mapping file id3292 NCBI fileEvidenceTAS
GeneHSD17B11AuthorityHGNC:22960Mapping file id51170 NCBI fileEvidenceTAS
GeneHSD17B12AuthorityHGNC:18646Mapping file id51144 NCBI fileEvidenceTAS
GeneHSD17B13AuthorityHGNC:18685Mapping file id345275 NCBI fileEvidenceTAS
GeneHSD17B14AuthorityHGNC:23238Mapping file id51171 NCBI fileEvidenceTAS
GeneHSD17B2AuthorityHGNC:5211Mapping file id3294 NCBI fileEvidenceTAS
GeneHSD17B3AuthorityHGNC:5212Mapping file id3293 NCBI fileEvidenceTAS
GeneHSD17B4AuthorityHGNC:5213Mapping file id3295 NCBI fileEvidenceTAS
GeneHSD17B7AuthorityHGNC:5215Mapping file id51478 NCBI fileEvidenceTAS
GeneHSD17B8AuthorityHGNC:3554Mapping file id7923 NCBI fileEvidenceTAS
GeneHSD3B1AuthorityHGNC:5217Mapping file id3283 NCBI fileEvidenceTAS
GeneHSD3B2AuthorityHGNC:5218Mapping file id3284 NCBI fileEvidenceTAS
GeneHSD3B7AuthorityHGNC:18324Mapping file id80270 NCBI fileEvidenceTAS
GeneHTD2AuthorityHGNC:53111Mapping file id109703458 NCBI fileEvidenceTAS
GeneIDI1AuthorityHGNC:5387Mapping file id3422 NCBI fileEvidenceTAS
GeneIDI2AuthorityHGNC:23487Mapping file id91734 NCBI fileEvidenceTAS
GeneINPP4AAuthorityHGNC:6074Mapping file id3631 NCBI fileEvidenceTAS
GeneINPP4BAuthorityHGNC:6075Mapping file id8821 NCBI fileEvidenceTAS
GeneINPP5DAuthorityHGNC:6079Mapping file id3635 NCBI fileEvidenceTAS
GeneINPP5EAuthorityHGNC:21474Mapping file id56623 NCBI fileEvidenceTAS
GeneINPP5FAuthorityHGNC:17054Mapping file id22876 NCBI fileEvidenceTAS
GeneINPP5JAuthorityHGNC:8956Mapping file id27124 NCBI fileEvidenceTAS
GeneINPP5KAuthorityHGNC:33882Mapping file id51763 NCBI fileEvidenceTAS
GeneINPPL1AuthorityHGNC:6080Mapping file id3636 NCBI fileEvidenceTAS
GeneINSIG1AuthorityHGNC:6083Mapping file id3638 NCBI fileEvidenceIEA
GeneINSIG2AuthorityHGNC:20452Mapping file id51141 NCBI fileEvidenceIEA
GeneKDSRAuthorityHGNC:4021Mapping file id2531 NCBI fileEvidenceTAS
GeneKPNB1AuthorityHGNC:6400Mapping file id3837 NCBI fileEvidenceTAS
GeneLBRAuthorityHGNC:6518Mapping file id3930 NCBI fileEvidenceTAS
GeneLCLAT1AuthorityHGNC:26756Mapping file id253558 NCBI fileEvidenceTAS
GeneLDLRAP1AuthorityHGNC:18640Mapping file id26119 NCBI fileEvidenceTAS
GeneLGMNAuthorityHGNC:9472Mapping file id5641 NCBI fileEvidenceTAS
GeneLHBAuthorityHGNC:6584Mapping file id3972 NCBI fileEvidenceTAS
GeneLIPEAuthorityHGNC:6621Mapping file id3991 NCBI fileEvidenceIEA
GeneLIPHAuthorityHGNC:18483Mapping file id200879 NCBI fileEvidenceTAS
GeneLIPIAuthorityHGNC:18821Mapping file id149998 NCBI fileEvidenceTAS
GeneLPCAT1AuthorityHGNC:25718Mapping file id79888 NCBI fileEvidenceTAS
GeneLPCAT2AuthorityHGNC:26032Mapping file id54947 NCBI fileEvidenceTAS
GeneLPCAT3AuthorityHGNC:30244Mapping file id10162 NCBI fileEvidenceTAS
GeneLPCAT4AuthorityHGNC:30059Mapping file id254531 NCBI fileEvidenceTAS
GeneLPGAT1AuthorityHGNC:28985Mapping file id9926 NCBI fileEvidenceTAS
GeneLPIN1AuthorityHGNC:13345Mapping file id23175 NCBI fileEvidenceTAS
GeneLPIN2AuthorityHGNC:14450Mapping file id9663 NCBI fileEvidenceTAS
GeneLPIN3AuthorityHGNC:14451Mapping file id64900 NCBI fileEvidenceTAS
GeneLRP2AuthorityHGNC:6694Mapping file id4036 NCBI fileEvidenceTAS
GeneLSSAuthorityHGNC:6708Mapping file id4047 NCBI fileEvidenceTAS
GeneLTA4HAuthorityHGNC:6710Mapping file id4048 NCBI fileEvidenceTAS
GeneLTC4SAuthorityHGNC:6719Mapping file id4056 NCBI fileEvidenceTAS
GeneM6PRAuthorityHGNC:6752Mapping file id4074 NCBI fileEvidenceTAS
GeneMAPKAPK2AuthorityHGNC:6887Mapping file id9261 NCBI fileEvidenceTAS
GeneMBOAT1AuthorityHGNC:21579Mapping file id154141 NCBI fileEvidenceTAS
GeneMBOAT2AuthorityHGNC:25193Mapping file id129642 NCBI fileEvidenceTAS
GeneMBOAT7AuthorityHGNC:15505Mapping file id79143 NCBI fileEvidenceTAS
GeneMBTPS1AuthorityHGNC:15456Mapping file id8720 NCBI fileEvidenceTAS
GeneMBTPS2AuthorityHGNC:15455Mapping file id51360 NCBI fileEvidenceTAS
GeneMCATAuthorityHGNC:29622Mapping file id27349 NCBI fileEvidenceTAS
GeneMCEEAuthorityHGNC:16732Mapping file id84693 NCBI fileEvidenceTAS
GeneME1AuthorityHGNC:6983Mapping file id4199 NCBI fileEvidenceTAS
GeneMECRAuthorityHGNC:19691Mapping file id51102 NCBI fileEvidenceTAS
GeneMED1AuthorityHGNC:9234Mapping file id5469 NCBI fileEvidenceIEA, TAS
GeneMED10AuthorityHGNC:28760Mapping file id84246 NCBI fileEvidenceTAS
GeneMED11AuthorityHGNC:32687Mapping file id400569 NCBI fileEvidenceTAS
GeneMED12AuthorityHGNC:11957Mapping file id9968 NCBI fileEvidenceTAS

Evidence codes on this page: IEA, TAS, as the mapping file writes them; a row carrying two was written twice by the file, once under each. The mapping file id says which file placed the gene: an NCBI Gene id from NCBI2Reactome_All_Levels.txt, an Ensembl gene id from Ensembl2Reactome_All_Levels.txt. The two files can disagree about a code, so a row's codes are the one file's view. Measured by this site's build over this release on 2026-09-09: of the 138,908 human pathway-gene pairs both files place, 207 (0.149 per cent, over 47 genes) carry TAS in the Ensembl file where the NCBI rows carry IEA alone.

  • Reactome mapping files, the human rows for this pathway · Reactome release 97 · read · Reactome downloads"NCBI2Reactome_All_Levels.txt" and "Ensembl2Reactome_All_Levels.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.

03The hierarchy

Parents and children in this release's hierarchy

Reactome's hierarchy is a graph rather than a tree: a pathway can sit under more than one parent, and the gene counts are each pathway's own placements at every level under it, so a parent's count is not the sum of its children's.

  • Reactome, the human pathway list and hierarchy relationship file · Reactome release 97 · read · Reactome downloads"ReactomePathways.txt" and "ReactomePathwaysRelation.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.