Pathway Human Homo sapiens
Metabolism of lipids
R-HSA-556833 in Reactome release 97: under Metabolism, with 758 genes placed in it by the mapping files and 10 child pathways in the hierarchy.
The same number in the other species
Reactome writes the mouse and rat events it infers from a human pathway under the human number with the species token. A door opens only where that species' own list in this release holds the id: R-MMU-556833 (mouse), R-RNO-556833 (rat). Whether the event was inferred from this one is what the record says.
01The record
Reactome's own record of this pathway
What this tells you
The pathway list, the hierarchy and the genes on this page are read from the files Reactome publishes for Reactome release 97, built into this site on 2026-09-09: the pathway list, the hierarchy relationship file and the two gene mapping files. The record card is the one live read, Reactome's own record of this pathway.
Reactome's download page describes the mapping files: Mapping files link the source database identifier to the lowest level pathway diagram or subset of the pathway, all levels of the pathway hierarchy or database identifier to all reactions.
[R13] The gene list here is the all-levels mapping of NCBI Gene ids, filled from the all-levels mapping of Ensembl ids where the NCBI file has no row for a gene; each row names which file it came from by the shape of its source id. Each row carries the evidence codes the file writes for it, as written and unranked, and both where the file writes both; no page of Reactome's documentation the survey read defines the codes, so this page does not expand them. A gene id the identity files do not name is kept as the source's own id with no door rather than turned into a symbol.
On citing what a search finds, Reactome says: It should be remembered that while we strive to contain the most current and accurate data, Reactome should not be used in citations where other primary sources of information are available.
[R12] The record card prints the literature Reactome attaches to a curated pathway for that reason. The data are public domain: All data in the Reactome database and files derived from that data are licensed under the Creative Commons Public Domain Dedication (CC0). User may copy, modify, and distribute these data, even for commercial purposes, without asking for permission. Attribution is encouraged but not required.
[R10] The pathway illustrations are licensed apart, under CC BY 4.0, and none is shown here.
A gene on this list is one Reactome places in this pathway in this release, and that is all the row says: it does not say the gene is expressed in a tissue or associated with a disease, which are the other two explorers' questions, read from other sources. Reactome's papers of record are [R01] [R02].
- [R01] Ragueneau E, Gong C, Sinquin P, Sevilla C, Beavers D, Grentner A, et al. (2026). The Reactome Knowledgebase 2026. Nucleic Acids Research 54:D673-D681. PMID 41251150, doi 10.1093/nar/gkaf1223.
- [R02] Milacic M, Beavers D, Conley P, Gong C, Gillespie M, Griss J, et al. (2024). The Reactome Pathway Knowledgebase 2024. Nucleic Acids Research 52:D672-D678. PMID 37941124, doi 10.1093/nar/gkad1025.
- [R10] Reactome, reactome.org. License Agreement. https://reactome.org/license, read 2026-09-09.
- [R12] Reactome, reactome.org. Citing us. https://reactome.org/cite, read 2026-09-09.
- [R13] Reactome, reactome.org. Download. https://reactome.org/download-data, read 2026-09-09.
02The genes
Genes Reactome places in this human pathway
The mapping files place 758 genes in this human pathway; showing 301 to 400, in pages of 100, sorted by symbol for reading. The order carries no ranking.
| Gene | Authority id | Mapping file id | Evidence codes |
|---|---|---|---|
| GeneGPAM | AuthorityHGNC:24865 | Mapping file id57678 NCBI file | EvidenceTAS |
| GeneGPAT2 | AuthorityHGNC:27168 | Mapping file id150763 NCBI file | EvidenceTAS |
| GeneGPAT3 | AuthorityHGNC:28157 | Mapping file id84803 NCBI file | EvidenceTAS |
| GeneGPAT4 | AuthorityHGNC:20880 | Mapping file id137964 NCBI file | EvidenceTAS |
| GeneGPCPD1 | AuthorityHGNC:26957 | Mapping file id56261 NCBI file | EvidenceIEA |
| GeneGPD1 | AuthorityHGNC:4455 | Mapping file id2819 NCBI file | EvidenceTAS |
| GeneGPD1L | AuthorityHGNC:28956 | Mapping file id23171 NCBI file | EvidenceTAS |
| GeneGPD2 | AuthorityHGNC:4456 | Mapping file id2820 NCBI file | EvidenceTAS |
| GeneGPS2 | AuthorityHGNC:4550 | Mapping file id2874 NCBI file | EvidenceTAS |
| GeneGPX1 | AuthorityHGNC:4553 | Mapping file id2876 NCBI file | EvidenceIEA, TAS |
| GeneGPX2 | AuthorityHGNC:4554 | Mapping file id2877 NCBI file | EvidenceIEA, TAS |
| GeneGPX4 | AuthorityHGNC:4556 | Mapping file id2879 NCBI file | EvidenceIEA, TAS |
| GeneGRHL1 | AuthorityHGNC:17923 | Mapping file id29841 NCBI file | EvidenceTAS |
| GeneGSTM4 | AuthorityHGNC:4636 | Mapping file id2948 NCBI file | EvidenceTAS |
| GeneHACD1 | AuthorityHGNC:9639 | Mapping file id9200 NCBI file | EvidenceTAS |
| GeneHACD2 | AuthorityHGNC:9640 | Mapping file id201562 NCBI file | EvidenceTAS |
| GeneHACD3 | AuthorityHGNC:24175 | Mapping file id51495 NCBI file | EvidenceTAS |
| GeneHACD4 | AuthorityHGNC:20920 | Mapping file id401494 NCBI file | EvidenceTAS |
| GeneHACL1 | AuthorityHGNC:17856 | Mapping file id26061 NCBI file | EvidenceTAS |
| GeneHADH | AuthorityHGNC:4799 | Mapping file id3033 NCBI file | EvidenceTAS |
| GeneHADHA | AuthorityHGNC:4801 | Mapping file id3030 NCBI file | EvidenceTAS |
| GeneHADHB | AuthorityHGNC:4803 | Mapping file id3032 NCBI file | EvidenceTAS |
| GeneHAO2 | AuthorityHGNC:4810 | Mapping file id51179 NCBI file | EvidenceTAS |
| GeneHDAC3 | AuthorityHGNC:4854 | Mapping file id8841 NCBI file | EvidenceIEA, TAS |
| GeneHELZ2 | AuthorityHGNC:30021 | Mapping file id85441 NCBI file | EvidenceIEA, TAS |
| GeneHEXA | AuthorityHGNC:4878 | Mapping file id3073 NCBI file | EvidenceTAS |
| GeneHEXB | AuthorityHGNC:4879 | Mapping file id3074 NCBI file | EvidenceTAS |
| GeneHILPDA | AuthorityHGNC:28859 | Mapping file id29923 NCBI file | EvidenceTAS |
| GeneHMGCL | AuthorityHGNC:5005 | Mapping file id3155 NCBI file | EvidenceTAS |
| GeneHMGCLL1 | AuthorityHGNC:21359 | Mapping file id54511 NCBI file | EvidenceTAS |
| GeneHMGCR | AuthorityHGNC:5006 | Mapping file id3156 NCBI file | EvidenceTAS |
| GeneHMGCS1 | AuthorityHGNC:5007 | Mapping file id3157 NCBI file | EvidenceTAS |
| GeneHMGCS2 | AuthorityHGNC:5008 | Mapping file id3158 NCBI file | EvidenceTAS |
| GeneHPGD | AuthorityHGNC:5154 | Mapping file id3248 NCBI file | EvidenceIEA, TAS |
| GeneHPGDS | AuthorityHGNC:17890 | Mapping file id27306 NCBI file | EvidenceTAS |
| GeneHSD11B1 | AuthorityHGNC:5208 | Mapping file id3290 NCBI file | EvidenceTAS |
| GeneHSD11B2 | AuthorityHGNC:5209 | Mapping file id3291 NCBI file | EvidenceTAS |
| GeneHSD17B1 | AuthorityHGNC:5210 | Mapping file id3292 NCBI file | EvidenceTAS |
| GeneHSD17B11 | AuthorityHGNC:22960 | Mapping file id51170 NCBI file | EvidenceTAS |
| GeneHSD17B12 | AuthorityHGNC:18646 | Mapping file id51144 NCBI file | EvidenceTAS |
| GeneHSD17B13 | AuthorityHGNC:18685 | Mapping file id345275 NCBI file | EvidenceTAS |
| GeneHSD17B14 | AuthorityHGNC:23238 | Mapping file id51171 NCBI file | EvidenceTAS |
| GeneHSD17B2 | AuthorityHGNC:5211 | Mapping file id3294 NCBI file | EvidenceTAS |
| GeneHSD17B3 | AuthorityHGNC:5212 | Mapping file id3293 NCBI file | EvidenceTAS |
| GeneHSD17B4 | AuthorityHGNC:5213 | Mapping file id3295 NCBI file | EvidenceTAS |
| GeneHSD17B7 | AuthorityHGNC:5215 | Mapping file id51478 NCBI file | EvidenceTAS |
| GeneHSD17B8 | AuthorityHGNC:3554 | Mapping file id7923 NCBI file | EvidenceTAS |
| GeneHSD3B1 | AuthorityHGNC:5217 | Mapping file id3283 NCBI file | EvidenceTAS |
| GeneHSD3B2 | AuthorityHGNC:5218 | Mapping file id3284 NCBI file | EvidenceTAS |
| GeneHSD3B7 | AuthorityHGNC:18324 | Mapping file id80270 NCBI file | EvidenceTAS |
| GeneHTD2 | AuthorityHGNC:53111 | Mapping file id109703458 NCBI file | EvidenceTAS |
| GeneIDI1 | AuthorityHGNC:5387 | Mapping file id3422 NCBI file | EvidenceTAS |
| GeneIDI2 | AuthorityHGNC:23487 | Mapping file id91734 NCBI file | EvidenceTAS |
| GeneINPP4A | AuthorityHGNC:6074 | Mapping file id3631 NCBI file | EvidenceTAS |
| GeneINPP4B | AuthorityHGNC:6075 | Mapping file id8821 NCBI file | EvidenceTAS |
| GeneINPP5D | AuthorityHGNC:6079 | Mapping file id3635 NCBI file | EvidenceTAS |
| GeneINPP5E | AuthorityHGNC:21474 | Mapping file id56623 NCBI file | EvidenceTAS |
| GeneINPP5F | AuthorityHGNC:17054 | Mapping file id22876 NCBI file | EvidenceTAS |
| GeneINPP5J | AuthorityHGNC:8956 | Mapping file id27124 NCBI file | EvidenceTAS |
| GeneINPP5K | AuthorityHGNC:33882 | Mapping file id51763 NCBI file | EvidenceTAS |
| GeneINPPL1 | AuthorityHGNC:6080 | Mapping file id3636 NCBI file | EvidenceTAS |
| GeneINSIG1 | AuthorityHGNC:6083 | Mapping file id3638 NCBI file | EvidenceIEA |
| GeneINSIG2 | AuthorityHGNC:20452 | Mapping file id51141 NCBI file | EvidenceIEA |
| GeneKDSR | AuthorityHGNC:4021 | Mapping file id2531 NCBI file | EvidenceTAS |
| GeneKPNB1 | AuthorityHGNC:6400 | Mapping file id3837 NCBI file | EvidenceTAS |
| GeneLBR | AuthorityHGNC:6518 | Mapping file id3930 NCBI file | EvidenceTAS |
| GeneLCLAT1 | AuthorityHGNC:26756 | Mapping file id253558 NCBI file | EvidenceTAS |
| GeneLDLRAP1 | AuthorityHGNC:18640 | Mapping file id26119 NCBI file | EvidenceTAS |
| GeneLGMN | AuthorityHGNC:9472 | Mapping file id5641 NCBI file | EvidenceTAS |
| GeneLHB | AuthorityHGNC:6584 | Mapping file id3972 NCBI file | EvidenceTAS |
| GeneLIPE | AuthorityHGNC:6621 | Mapping file id3991 NCBI file | EvidenceIEA |
| GeneLIPH | AuthorityHGNC:18483 | Mapping file id200879 NCBI file | EvidenceTAS |
| GeneLIPI | AuthorityHGNC:18821 | Mapping file id149998 NCBI file | EvidenceTAS |
| GeneLPCAT1 | AuthorityHGNC:25718 | Mapping file id79888 NCBI file | EvidenceTAS |
| GeneLPCAT2 | AuthorityHGNC:26032 | Mapping file id54947 NCBI file | EvidenceTAS |
| GeneLPCAT3 | AuthorityHGNC:30244 | Mapping file id10162 NCBI file | EvidenceTAS |
| GeneLPCAT4 | AuthorityHGNC:30059 | Mapping file id254531 NCBI file | EvidenceTAS |
| GeneLPGAT1 | AuthorityHGNC:28985 | Mapping file id9926 NCBI file | EvidenceTAS |
| GeneLPIN1 | AuthorityHGNC:13345 | Mapping file id23175 NCBI file | EvidenceTAS |
| GeneLPIN2 | AuthorityHGNC:14450 | Mapping file id9663 NCBI file | EvidenceTAS |
| GeneLPIN3 | AuthorityHGNC:14451 | Mapping file id64900 NCBI file | EvidenceTAS |
| GeneLRP2 | AuthorityHGNC:6694 | Mapping file id4036 NCBI file | EvidenceTAS |
| GeneLSS | AuthorityHGNC:6708 | Mapping file id4047 NCBI file | EvidenceTAS |
| GeneLTA4H | AuthorityHGNC:6710 | Mapping file id4048 NCBI file | EvidenceTAS |
| GeneLTC4S | AuthorityHGNC:6719 | Mapping file id4056 NCBI file | EvidenceTAS |
| GeneM6PR | AuthorityHGNC:6752 | Mapping file id4074 NCBI file | EvidenceTAS |
| GeneMAPKAPK2 | AuthorityHGNC:6887 | Mapping file id9261 NCBI file | EvidenceTAS |
| GeneMBOAT1 | AuthorityHGNC:21579 | Mapping file id154141 NCBI file | EvidenceTAS |
| GeneMBOAT2 | AuthorityHGNC:25193 | Mapping file id129642 NCBI file | EvidenceTAS |
| GeneMBOAT7 | AuthorityHGNC:15505 | Mapping file id79143 NCBI file | EvidenceTAS |
| GeneMBTPS1 | AuthorityHGNC:15456 | Mapping file id8720 NCBI file | EvidenceTAS |
| GeneMBTPS2 | AuthorityHGNC:15455 | Mapping file id51360 NCBI file | EvidenceTAS |
| GeneMCAT | AuthorityHGNC:29622 | Mapping file id27349 NCBI file | EvidenceTAS |
| GeneMCEE | AuthorityHGNC:16732 | Mapping file id84693 NCBI file | EvidenceTAS |
| GeneME1 | AuthorityHGNC:6983 | Mapping file id4199 NCBI file | EvidenceTAS |
| GeneMECR | AuthorityHGNC:19691 | Mapping file id51102 NCBI file | EvidenceTAS |
| GeneMED1 | AuthorityHGNC:9234 | Mapping file id5469 NCBI file | EvidenceIEA, TAS |
| GeneMED10 | AuthorityHGNC:28760 | Mapping file id84246 NCBI file | EvidenceTAS |
| GeneMED11 | AuthorityHGNC:32687 | Mapping file id400569 NCBI file | EvidenceTAS |
| GeneMED12 | AuthorityHGNC:11957 | Mapping file id9968 NCBI file | EvidenceTAS |
Evidence codes on this page: IEA, TAS, as the mapping file writes them; a row carrying two was written twice by the file, once under each. The mapping file id says which file placed the gene: an NCBI Gene id from NCBI2Reactome_All_Levels.txt, an Ensembl gene id from Ensembl2Reactome_All_Levels.txt. The two files can disagree about a code, so a row's codes are the one file's view. Measured by this site's build over this release on 2026-09-09: of the 138,908 human pathway-gene pairs both files place, 207 (0.149 per cent, over 47 genes) carry TAS in the Ensembl file where the NCBI rows carry IEA alone.
- Reactome mapping files, the human rows for this pathway · Reactome release 97 · read · Reactome downloads"NCBI2Reactome_All_Levels.txt" and "Ensembl2Reactome_All_Levels.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.
03The hierarchy
Parents and children in this release's hierarchy
Children
- Biosynthesis of specialized proresolving mediators (SPMs)R-HSA-901867819 genes
- Fatty acid metabolismR-HSA-8978868175 genes
- Ketone body metabolismR-HSA-7418210 genes
- Lipid particle organizationR-HSA-89645726 genes
- Metabolism of steroidsR-HSA-8957322155 genes
- Phospholipid metabolismR-HSA-1483257212 genes
- Regulation of lipid metabolism by PPARalphaR-HSA-400206119 genes
- Sphingolipid metabolismR-HSA-428157107 genes
- Triglyceride metabolismR-HSA-897922738 genes
- Wax and plasmalogen biosynthesisR-HSA-88485847 genes
Reactome's hierarchy is a graph rather than a tree: a pathway can sit under more than one parent, and the gene counts are each pathway's own placements at every level under it, so a parent's count is not the sum of its children's.
- Reactome, the human pathway list and hierarchy relationship file · Reactome release 97 · read · Reactome downloads"ReactomePathways.txt" and "ReactomePathwaysRelation.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.