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Pathway Human Homo sapiens

Disease

R-HSA-1643685 in Reactome release 97: a top-level pathway, with 2,550 genes placed in it by the mapping files and 12 child pathways in the hierarchy.

The same number in the other species

Reactome writes the mouse and rat events it infers from a human pathway under the human number with the species token. A door opens only where that species' own list in this release holds the id; neither of the other two lists holds it. Whether the event was inferred from this one is what the record says.

01The record

Reactome's own record of this pathway

What this tells you

The pathway list, the hierarchy and the genes on this page are read from the files Reactome publishes for Reactome release 97, built into this site on 2026-09-09: the pathway list, the hierarchy relationship file and the two gene mapping files. The record card is the one live read, Reactome's own record of this pathway.

Reactome's download page describes the mapping files: Mapping files link the source database identifier to the lowest level pathway diagram or subset of the pathway, all levels of the pathway hierarchy or database identifier to all reactions. [R13] The gene list here is the all-levels mapping of NCBI Gene ids, filled from the all-levels mapping of Ensembl ids where the NCBI file has no row for a gene; each row names which file it came from by the shape of its source id. Each row carries the evidence codes the file writes for it, as written and unranked, and both where the file writes both; no page of Reactome's documentation the survey read defines the codes, so this page does not expand them. A gene id the identity files do not name is kept as the source's own id with no door rather than turned into a symbol.

On citing what a search finds, Reactome says: It should be remembered that while we strive to contain the most current and accurate data, Reactome should not be used in citations where other primary sources of information are available. [R12] The record card prints the literature Reactome attaches to a curated pathway for that reason. The data are public domain: All data in the Reactome database and files derived from that data are licensed under the Creative Commons Public Domain Dedication (CC0). User may copy, modify, and distribute these data, even for commercial purposes, without asking for permission. Attribution is encouraged but not required. [R10] The pathway illustrations are licensed apart, under CC BY 4.0, and none is shown here.

A gene on this list is one Reactome places in this pathway in this release, and that is all the row says: it does not say the gene is expressed in a tissue or associated with a disease, which are the other two explorers' questions, read from other sources. Reactome's papers of record are [R01] [R02].

  1. [R01] Ragueneau E, Gong C, Sinquin P, Sevilla C, Beavers D, Grentner A, et al. (2026). The Reactome Knowledgebase 2026. Nucleic Acids Research 54:D673-D681. PMID 41251150, doi 10.1093/nar/gkaf1223.
  2. [R02] Milacic M, Beavers D, Conley P, Gong C, Gillespie M, Griss J, et al. (2024). The Reactome Pathway Knowledgebase 2024. Nucleic Acids Research 52:D672-D678. PMID 37941124, doi 10.1093/nar/gkad1025.
  3. [R10] Reactome, reactome.org. License Agreement. https://reactome.org/license, read 2026-09-09.
  4. [R12] Reactome, reactome.org. Citing us. https://reactome.org/cite, read 2026-09-09.
  5. [R13] Reactome, reactome.org. Download. https://reactome.org/download-data, read 2026-09-09.
Reading this pathway's record from Reactome (the pathway record).Still reading. A first read of a pathway can take a while; this page waits up to 35 seconds for it, and its scripts then bring in the panel, or a line saying what did not arrive.

02The genes

Genes Reactome places in this human pathway

The mapping files place 2,550 genes in this human pathway; showing 501 to 600, in pages of 100, sorted by symbol for reading. The order carries no ranking.

Genes Reactome places in this human pathway, page 6 of 26
GeneDUSP8AuthorityHGNC:3074Mapping file id1850 NCBI fileEvidenceTAS
GeneDUSP9AuthorityHGNC:3076Mapping file id1852 NCBI fileEvidenceTAS
GeneDVL1AuthorityHGNC:3084Mapping file id1855 NCBI fileEvidenceIEA, TAS
GeneDVL2AuthorityHGNC:3086Mapping file id1856 NCBI fileEvidenceIEA, TAS
GeneDVL3AuthorityHGNC:3087Mapping file id1857 NCBI fileEvidenceIEA, TAS
GeneDYNC1H1AuthorityHGNC:2961Mapping file id1778 NCBI fileEvidenceTAS
GeneDYNC1I1AuthorityHGNC:2963Mapping file id1780 NCBI fileEvidenceTAS
GeneDYNC1I2AuthorityHGNC:2964Mapping file id1781 NCBI fileEvidenceTAS
GeneDYNC1LI1AuthorityHGNC:18745Mapping file id51143 NCBI fileEvidenceTAS
GeneDYNC1LI2AuthorityHGNC:2966Mapping file id1783 NCBI fileEvidenceTAS
GeneDYNLL1AuthorityHGNC:15476Mapping file id8655 NCBI fileEvidenceTAS
GeneDYNLL2AuthorityHGNC:24596Mapping file id140735 NCBI fileEvidenceTAS
GeneDYNLT1AuthorityHGNC:11697Mapping file id6993 NCBI fileEvidenceTAS
GeneE2F1AuthorityHGNC:3113Mapping file id1869 NCBI fileEvidenceTAS
GeneE2F2AuthorityHGNC:3114Mapping file id1870 NCBI fileEvidenceTAS
GeneE2F3AuthorityHGNC:3115Mapping file id1871 NCBI fileEvidenceTAS
GeneECHS1AuthorityHGNC:3151Mapping file id1892 NCBI fileEvidenceTAS
GeneEDEM2AuthorityHGNC:15877Mapping file id55741 NCBI fileEvidenceTAS
GeneEEDAuthorityHGNC:3188Mapping file id8726 NCBI fileEvidenceTAS
GeneEEF1A1AuthorityHGNC:3189Mapping file id1915 NCBI fileEvidenceTAS
GeneEEF1GAuthorityHGNC:3213Mapping file id1937 NCBI fileEvidenceTAS
GeneEEF2AuthorityHGNC:3214Mapping file id1938 NCBI fileEvidenceTAS
GeneEFTUD2AuthorityHGNC:30858Mapping file id9343 NCBI fileEvidenceTAS
GeneEGFAuthorityHGNC:3229Mapping file id1950 NCBI fileEvidenceTAS
GeneEGFRAuthorityHGNC:3236Mapping file id1956 NCBI fileEvidenceTAS
GeneEIF2AK2AuthorityHGNC:9437Mapping file id5610 NCBI fileEvidenceTAS
GeneEIF2AK3AuthorityHGNC:3255Mapping file id9451 NCBI fileEvidenceTAS
GeneEIF4A1AuthorityHGNC:3282Mapping file id1973 NCBI fileEvidenceTAS
GeneEIF4A2AuthorityHGNC:3284Mapping file id1974 NCBI fileEvidenceTAS
GeneEIF4A3AuthorityHGNC:18683Mapping file id9775 NCBI fileEvidenceTAS
GeneEIF4EAuthorityHGNC:3287Mapping file id1977 NCBI fileEvidenceTAS
GeneEIF4E3AuthorityHGNC:31837Mapping file id317649 NCBI fileEvidenceTAS
GeneEIF4G1AuthorityHGNC:3296Mapping file id1981 NCBI fileEvidenceTAS
GeneEIF4G2AuthorityHGNC:3297Mapping file id1982 NCBI fileEvidenceTAS
GeneEIF4G3AuthorityHGNC:3298Mapping file id8672 NCBI fileEvidenceTAS
GeneELAVL1AuthorityHGNC:3312Mapping file id1994 NCBI fileEvidenceTAS
GeneELAVL2AuthorityHGNC:3313Mapping file id1993 NCBI fileEvidenceTAS
GeneELK1AuthorityHGNC:3321Mapping file id2002 NCBI fileEvidenceTAS
GeneELLAuthorityHGNC:23114Mapping file id8178 NCBI fileEvidenceIEA
GeneELMO1AuthorityHGNC:16286Mapping file id9844 NCBI fileEvidenceTAS
GeneELMO2AuthorityHGNC:17233Mapping file id63916 NCBI fileEvidenceTAS
GeneELOAAuthorityHGNC:11620Mapping file id6924 NCBI fileEvidenceIEA
GeneELOA2AuthorityHGNC:30771Mapping file id51224 NCBI fileEvidenceIEA
GeneELOBAuthorityHGNC:11619Mapping file id6923 NCBI fileEvidenceIEA, TAS
GeneELOCAuthorityHGNC:11617Mapping file id6921 NCBI fileEvidenceIEA, TAS
GeneEMC4AuthorityHGNC:28032Mapping file id51234 NCBI fileEvidenceTAS
GeneEML4AuthorityHGNC:1316Mapping file id27436 NCBI fileEvidenceTAS
GeneENO1AuthorityHGNC:3350Mapping file id2023 NCBI fileEvidenceTAS
GeneENTPD1AuthorityHGNC:3363Mapping file id953 NCBI fileEvidenceTAS
GeneENTPD5AuthorityHGNC:3367Mapping file id957 NCBI fileEvidenceTAS
GeneEP300AuthorityHGNC:3373Mapping file id2033 NCBI fileEvidenceTAS
GeneEPCAMAuthorityHGNC:11529Mapping file id4072 NCBI fileEvidenceTAS
GeneEPGNAuthorityHGNC:17470Mapping file id255324 NCBI fileEvidenceTAS
GeneEPM2AAuthorityHGNC:3413Mapping file id7957 NCBI fileEvidenceTAS
GeneEPS15AuthorityHGNC:3419Mapping file id2060 NCBI fileEvidenceIEA
GeneERBB2AuthorityHGNC:3430Mapping file id2064 NCBI fileEvidenceTAS
GeneERBB3AuthorityHGNC:3431Mapping file id2065 NCBI fileEvidenceTAS
GeneERBB4AuthorityHGNC:3432Mapping file id2066 NCBI fileEvidenceTAS
GeneERBINAuthorityHGNC:15842Mapping file id55914 NCBI fileEvidenceTAS
GeneERCC2AuthorityHGNC:3434Mapping file id2068 NCBI fileEvidenceIEA
GeneERCC3AuthorityHGNC:3435Mapping file id2071 NCBI fileEvidenceIEA
GeneEREGAuthorityHGNC:3443Mapping file id2069 NCBI fileEvidenceTAS
GeneERLEC1AuthorityHGNC:25222Mapping file id27248 NCBI fileEvidenceTAS
GeneERLIN1AuthorityHGNC:16947Mapping file id10613 NCBI fileEvidenceTAS
GeneERLIN2AuthorityHGNC:1356Mapping file id11160 NCBI fileEvidenceTAS
GeneESR1AuthorityHGNC:3467Mapping file id2099 NCBI fileEvidenceTAS
GeneESR2AuthorityHGNC:3468Mapping file id2100 NCBI fileEvidenceTAS
GeneESRP1AuthorityHGNC:25966Mapping file id54845 NCBI fileEvidenceTAS
GeneETV6AuthorityHGNC:3495Mapping file id2120 NCBI fileEvidenceIEA, TAS
GeneEXO1AuthorityHGNC:3511Mapping file id9156 NCBI fileEvidenceTAS
GeneEXOC1AuthorityHGNC:30380Mapping file id55763 NCBI fileEvidenceTAS
GeneEXT1AuthorityHGNC:3512Mapping file id2131 NCBI fileEvidenceTAS
GeneEXT2AuthorityHGNC:3513Mapping file id2132 NCBI fileEvidenceTAS
GeneEZH2AuthorityHGNC:3527Mapping file id2146 NCBI fileEvidenceTAS
GeneF10AuthorityHGNC:3528Mapping file id2159 NCBI fileEvidenceTAS
GeneF11AuthorityHGNC:3529Mapping file id2160 NCBI fileEvidenceTAS
GeneF12AuthorityHGNC:3530Mapping file id2161 NCBI fileEvidenceTAS
GeneF2AuthorityHGNC:3535Mapping file id2147 NCBI fileEvidenceTAS
GeneF5AuthorityHGNC:3542Mapping file id2153 NCBI fileEvidenceTAS
GeneF8AuthorityHGNC:3546Mapping file id2157 NCBI fileEvidenceTAS
GeneF9AuthorityHGNC:3551Mapping file id2158 NCBI fileEvidenceTAS
GeneFADDAuthorityHGNC:3573Mapping file id8772 NCBI fileEvidenceTAS
GeneFAM114A2AuthorityHGNC:1333Mapping file id10827 NCBI fileEvidenceTAS
GeneFAM131BAuthorityHGNC:22202Mapping file id9715 NCBI fileEvidenceTAS
GeneFASLGAuthorityHGNC:11936Mapping file id356 NCBI fileEvidenceTAS
GeneFASNAuthorityHGNC:3594Mapping file id2194 NCBI fileEvidenceTAS
GeneFAUAuthorityHGNC:3597Mapping file id2197 NCBI fileEvidenceTAS
GeneFBXW7AuthorityHGNC:16712Mapping file id55294 NCBI fileEvidenceTAS
GeneFCGR1AAuthorityHGNC:3613Mapping file id2209 NCBI fileEvidenceTAS
GeneFCGR2AAuthorityHGNC:3616Mapping file id2212 NCBI fileEvidenceTAS
GeneFCGR3AAuthorityHGNC:3619Mapping file id2214 NCBI fileEvidenceTAS
GeneFDX1AuthorityHGNC:3638Mapping file id2230 NCBI fileEvidenceTAS
GeneFDX2AuthorityHGNC:30546Mapping file id112812 NCBI fileEvidenceTAS
GeneFDXRAuthorityHGNC:3642Mapping file id2232 NCBI fileEvidenceTAS
GeneFEN1AuthorityHGNC:3650Mapping file id2237 NCBI fileEvidenceTAS
GeneFGAAuthorityHGNC:3661Mapping file id2243 NCBI fileEvidenceTAS
GeneFGBAuthorityHGNC:3662Mapping file id2244 NCBI fileEvidenceTAS
GeneFGF1AuthorityHGNC:3665Mapping file id2246 NCBI fileEvidenceIEA, TAS
GeneFGF10AuthorityHGNC:3666Mapping file id2255 NCBI fileEvidenceTAS
GeneFGF16AuthorityHGNC:3672Mapping file id8823 NCBI fileEvidenceTAS

Evidence codes on this page: IEA, TAS, as the mapping file writes them; a row carrying two was written twice by the file, once under each. The mapping file id says which file placed the gene: an NCBI Gene id from NCBI2Reactome_All_Levels.txt, an Ensembl gene id from Ensembl2Reactome_All_Levels.txt. The two files can disagree about a code, so a row's codes are the one file's view. Measured by this site's build over this release on 2026-09-09: of the 138,908 human pathway-gene pairs both files place, 207 (0.149 per cent, over 47 genes) carry TAS in the Ensembl file where the NCBI rows carry IEA alone.

  • Reactome mapping files, the human rows for this pathway · Reactome release 97 · read · Reactome downloads"NCBI2Reactome_All_Levels.txt" and "Ensembl2Reactome_All_Levels.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.

03The hierarchy

Parents and children in this release's hierarchy

Reactome's hierarchy is a graph rather than a tree: a pathway can sit under more than one parent, and the gene counts are each pathway's own placements at every level under it, so a parent's count is not the sum of its children's.

  • Reactome, the human pathway list and hierarchy relationship file · Reactome release 97 · read · Reactome downloads"ReactomePathways.txt" and "ReactomePathwaysRelation.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.