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Pathway Human Homo sapiens

Metabolism of lipids

R-HSA-556833 in Reactome release 97: under Metabolism, with 758 genes placed in it by the mapping files and 10 child pathways in the hierarchy.

The same number in the other species

Reactome writes the mouse and rat events it infers from a human pathway under the human number with the species token. A door opens only where that species' own list in this release holds the id: R-MMU-556833 (mouse), R-RNO-556833 (rat). Whether the event was inferred from this one is what the record says.

01The record

Reactome's own record of this pathway

What this tells you

The pathway list, the hierarchy and the genes on this page are read from the files Reactome publishes for Reactome release 97, built into this site on 2026-09-09: the pathway list, the hierarchy relationship file and the two gene mapping files. The record card is the one live read, Reactome's own record of this pathway.

Reactome's download page describes the mapping files: Mapping files link the source database identifier to the lowest level pathway diagram or subset of the pathway, all levels of the pathway hierarchy or database identifier to all reactions. [R13] The gene list here is the all-levels mapping of NCBI Gene ids, filled from the all-levels mapping of Ensembl ids where the NCBI file has no row for a gene; each row names which file it came from by the shape of its source id. Each row carries the evidence codes the file writes for it, as written and unranked, and both where the file writes both; no page of Reactome's documentation the survey read defines the codes, so this page does not expand them. A gene id the identity files do not name is kept as the source's own id with no door rather than turned into a symbol.

On citing what a search finds, Reactome says: It should be remembered that while we strive to contain the most current and accurate data, Reactome should not be used in citations where other primary sources of information are available. [R12] The record card prints the literature Reactome attaches to a curated pathway for that reason. The data are public domain: All data in the Reactome database and files derived from that data are licensed under the Creative Commons Public Domain Dedication (CC0). User may copy, modify, and distribute these data, even for commercial purposes, without asking for permission. Attribution is encouraged but not required. [R10] The pathway illustrations are licensed apart, under CC BY 4.0, and none is shown here.

A gene on this list is one Reactome places in this pathway in this release, and that is all the row says: it does not say the gene is expressed in a tissue or associated with a disease, which are the other two explorers' questions, read from other sources. Reactome's papers of record are [R01] [R02].

  1. [R01] Ragueneau E, Gong C, Sinquin P, Sevilla C, Beavers D, Grentner A, et al. (2026). The Reactome Knowledgebase 2026. Nucleic Acids Research 54:D673-D681. PMID 41251150, doi 10.1093/nar/gkaf1223.
  2. [R02] Milacic M, Beavers D, Conley P, Gong C, Gillespie M, Griss J, et al. (2024). The Reactome Pathway Knowledgebase 2024. Nucleic Acids Research 52:D672-D678. PMID 37941124, doi 10.1093/nar/gkad1025.
  3. [R10] Reactome, reactome.org. License Agreement. https://reactome.org/license, read 2026-09-09.
  4. [R12] Reactome, reactome.org. Citing us. https://reactome.org/cite, read 2026-09-09.
  5. [R13] Reactome, reactome.org. Download. https://reactome.org/download-data, read 2026-09-09.
Reading this pathway's record from Reactome (the pathway record).Still reading. A first read of a pathway can take a while; this page waits up to 35 seconds for it, and its scripts then bring in the panel, or a line saying what did not arrive.

02The genes

Genes Reactome places in this human pathway

The mapping files place 758 genes in this human pathway; showing 1 to 100, in pages of 100, sorted by symbol for reading. The order carries no ranking.

Genes Reactome places in this human pathway, page 1 of 8
GeneA4GALTAuthorityHGNC:18149Mapping file id53947 NCBI fileEvidenceTAS
GeneAACSAuthorityHGNC:21298Mapping file id65985 NCBI fileEvidenceTAS
GeneABCA1AuthorityHGNC:29Mapping file id19 NCBI fileEvidenceTAS
GeneABCB11AuthorityHGNC:42Mapping file id8647 NCBI fileEvidenceTAS
GeneABCB4AuthorityHGNC:45Mapping file id5244 NCBI fileEvidenceTAS
GeneABCC1AuthorityHGNC:51Mapping file id4363 NCBI fileEvidenceTAS
GeneABCC3AuthorityHGNC:54Mapping file id8714 NCBI fileEvidenceTAS
GeneABCD1AuthorityHGNC:61Mapping file id215 NCBI fileEvidenceTAS
GeneABCD3AuthorityHGNC:67Mapping file id5825 NCBI fileEvidenceTAS
GeneABCG2AuthorityHGNC:74Mapping file id9429 NCBI fileEvidenceTAS
GeneABHD3AuthorityHGNC:18718Mapping file id171586 NCBI fileEvidenceTAS
GeneABHD4AuthorityHGNC:20154Mapping file id63874 NCBI fileEvidenceTAS
GeneABHD5AuthorityHGNC:21396Mapping file id51099 NCBI fileEvidenceIEA
GeneACAA1AuthorityHGNC:82Mapping file id30 NCBI fileEvidenceTAS
GeneACAA2AuthorityHGNC:83Mapping file id10449 NCBI fileEvidenceTAS
GeneACACAAuthorityHGNC:84Mapping file id31 NCBI fileEvidenceTAS
GeneACACBAuthorityHGNC:85Mapping file id32 NCBI fileEvidenceTAS
GeneACAD10AuthorityHGNC:21597Mapping file id80724 NCBI fileEvidenceTAS
GeneACAD11AuthorityHGNC:30211Mapping file id84129 NCBI fileEvidenceTAS
GeneACADLAuthorityHGNC:88Mapping file id33 NCBI fileEvidenceTAS
GeneACADMAuthorityHGNC:89Mapping file id34 NCBI fileEvidenceTAS
GeneACADSAuthorityHGNC:90Mapping file id35 NCBI fileEvidenceTAS
GeneACADVLAuthorityHGNC:92Mapping file id37 NCBI fileEvidenceTAS
GeneACAT1AuthorityHGNC:93Mapping file id38 NCBI fileEvidenceTAS
GeneACAT2AuthorityHGNC:94Mapping file id39 NCBI fileEvidenceTAS
GeneACBD4AuthorityHGNC:23337Mapping file id79777 NCBI fileEvidenceTAS
GeneACBD5AuthorityHGNC:23338Mapping file id91452 NCBI fileEvidenceTAS
GeneACBD6AuthorityHGNC:23339Mapping file id84320 NCBI fileEvidenceTAS
GeneACBD7AuthorityHGNC:17715Mapping file id414149 NCBI fileEvidenceTAS
GeneACER1AuthorityHGNC:18356Mapping file id125981 NCBI fileEvidenceTAS
GeneACER2AuthorityHGNC:23675Mapping file id340485 NCBI fileEvidenceTAS
GeneACER3AuthorityHGNC:16066Mapping file id55331 NCBI fileEvidenceTAS
GeneACHEAuthorityHGNC:108Mapping file id43 NCBI fileEvidenceTAS
GeneACLYAuthorityHGNC:115Mapping file id47 NCBI fileEvidenceTAS
GeneACOT1AuthorityHGNC:33128Mapping file id641371 NCBI fileEvidenceTAS
GeneACOT11AuthorityHGNC:18156Mapping file id26027 NCBI fileEvidenceTAS
GeneACOT12AuthorityHGNC:24436Mapping file id134526 NCBI fileEvidenceTAS
GeneACOT13AuthorityHGNC:20999Mapping file id55856 NCBI fileEvidenceTAS
GeneACOT2AuthorityHGNC:18431Mapping file id10965 NCBI fileEvidenceTAS
GeneACOT4AuthorityHGNC:19748Mapping file id122970 NCBI fileEvidenceTAS
GeneACOT7AuthorityHGNC:24157Mapping file id11332 NCBI fileEvidenceTAS
GeneACOT8AuthorityHGNC:15919Mapping file id10005 NCBI fileEvidenceTAS
GeneACOT9AuthorityHGNC:17152Mapping file id23597 NCBI fileEvidenceTAS
GeneACOX1AuthorityHGNC:119Mapping file id51 NCBI fileEvidenceTAS
GeneACOX2AuthorityHGNC:120Mapping file id8309 NCBI fileEvidenceTAS
GeneACOX3AuthorityHGNC:121Mapping file id8310 NCBI fileEvidenceTAS
GeneACOXLAuthorityHGNC:25621Mapping file id55289 NCBI fileEvidenceTAS
GeneACP6AuthorityHGNC:29609Mapping file id51205 NCBI fileEvidenceTAS
GeneACSBG1AuthorityHGNC:29567Mapping file id23205 NCBI fileEvidenceTAS
GeneACSBG2AuthorityHGNC:24174Mapping file id81616 NCBI fileEvidenceTAS
GeneACSF2AuthorityHGNC:26101Mapping file id80221 NCBI fileEvidenceTAS
GeneACSF3AuthorityHGNC:27288Mapping file id197322 NCBI fileEvidenceTAS
GeneACSL1AuthorityHGNC:3569Mapping file id2180 NCBI fileEvidenceTAS
GeneACSL3AuthorityHGNC:3570Mapping file id2181 NCBI fileEvidenceTAS
GeneACSL4AuthorityHGNC:3571Mapping file id2182 NCBI fileEvidenceTAS
GeneACSL5AuthorityHGNC:16526Mapping file id51703 NCBI fileEvidenceTAS
GeneACSL6AuthorityHGNC:16496Mapping file id23305 NCBI fileEvidenceTAS
GeneACSM3AuthorityHGNC:10522Mapping file id6296 NCBI fileEvidenceIEA
GeneACSM6AuthorityHGNC:31665Mapping file id142827 NCBI fileEvidenceIEA
GeneACSS3AuthorityHGNC:24723Mapping file id79611 NCBI fileEvidenceTAS
GeneAGKAuthorityHGNC:21869Mapping file id55750 NCBI fileEvidenceTAS
GeneAGMOAuthorityHGNC:33784Mapping file id392636 NCBI fileEvidenceTAS
GeneAGPAT1AuthorityHGNC:324Mapping file id10554 NCBI fileEvidenceTAS
GeneAGPAT2AuthorityHGNC:325Mapping file id10555 NCBI fileEvidenceTAS
GeneAGPAT3AuthorityHGNC:326Mapping file id56894 NCBI fileEvidenceTAS
GeneAGPAT4AuthorityHGNC:20885Mapping file id56895 NCBI fileEvidenceTAS
GeneAGPAT5AuthorityHGNC:20886Mapping file id55326 NCBI fileEvidenceTAS
GeneAGPSAuthorityHGNC:327Mapping file id8540 NCBI fileEvidenceTAS
GeneAGTAuthorityHGNC:333Mapping file id183 NCBI fileEvidenceTAS
GeneAHRAuthorityHGNC:348Mapping file id196 NCBI fileEvidenceTAS
GeneAHRRAuthorityHGNC:346Mapping file id57491 NCBI fileEvidenceTAS
GeneAKR1B1AuthorityHGNC:381Mapping file id231 NCBI fileEvidenceTAS
GeneAKR1B15AuthorityHGNC:37281Mapping file id441282 NCBI fileEvidenceTAS
GeneAKR1C1AuthorityHGNC:384Mapping file id1645 NCBI fileEvidenceTAS
GeneAKR1C2AuthorityHGNC:385Mapping file id1646 NCBI fileEvidenceTAS
GeneAKR1C3AuthorityHGNC:386Mapping file id8644 NCBI fileEvidenceTAS
GeneAKR1C4AuthorityHGNC:387Mapping file id1109 NCBI fileEvidenceTAS
GeneAKR1D1AuthorityHGNC:388Mapping file id6718 NCBI fileEvidenceTAS
GeneALAS1AuthorityHGNC:396Mapping file id211 NCBI fileEvidenceTAS
GeneALBAuthorityHGNC:399Mapping file id213 NCBI fileEvidenceTAS
GeneALDH3A2AuthorityHGNC:403Mapping file id224 NCBI fileEvidenceTAS
GeneALDH3B1AuthorityHGNC:410Mapping file id221 NCBI fileEvidenceTAS
GeneALDH3B2AuthorityHGNC:411Mapping file id222 NCBI fileEvidenceTAS
GeneALOX12AuthorityHGNC:429Mapping file id239 NCBI fileEvidenceTAS
GeneALOX12BAuthorityHGNC:430Mapping file id242 NCBI fileEvidenceTAS
GeneALOX15AuthorityHGNC:433Mapping file id246 NCBI fileEvidenceTAS
GeneALOX15BAuthorityHGNC:434Mapping file id247 NCBI fileEvidenceTAS
GeneALOX5AuthorityHGNC:435Mapping file id240 NCBI fileEvidenceTAS
GeneALOX5APAuthorityHGNC:436Mapping file id241 NCBI fileEvidenceTAS
GeneALOXE3AuthorityHGNC:13743Mapping file id59344 NCBI fileEvidenceTAS
GeneALPIAuthorityHGNC:437Mapping file id248 NCBI fileEvidenceTAS
GeneAMACRAuthorityHGNC:451Mapping file id23600 NCBI fileEvidenceTAS
GeneANGPTL4AuthorityHGNC:16039Mapping file id51129 NCBI fileEvidenceTAS
GeneANKRD1AuthorityHGNC:15819Mapping file id27063 NCBI fileEvidenceTAS
GeneAPOA1AuthorityHGNC:600Mapping file id335 NCBI fileEvidenceTAS
GeneAPOA2AuthorityHGNC:601Mapping file id336 NCBI fileEvidenceTAS
GeneAPOA5AuthorityHGNC:17288Mapping file id116519 NCBI fileEvidenceTAS
GeneARF1AuthorityHGNC:652Mapping file id375 NCBI fileEvidenceTAS
GeneARF3AuthorityHGNC:654Mapping file id377 NCBI fileEvidenceTAS
GeneARNTAuthorityHGNC:700Mapping file id405 NCBI fileEvidenceTAS

Evidence codes on this page: IEA, TAS, as the mapping file writes them; a row carrying two was written twice by the file, once under each. The mapping file id says which file placed the gene: an NCBI Gene id from NCBI2Reactome_All_Levels.txt, an Ensembl gene id from Ensembl2Reactome_All_Levels.txt. The two files can disagree about a code, so a row's codes are the one file's view. Measured by this site's build over this release on 2026-09-09: of the 138,908 human pathway-gene pairs both files place, 207 (0.149 per cent, over 47 genes) carry TAS in the Ensembl file where the NCBI rows carry IEA alone.

  • Reactome mapping files, the human rows for this pathway · Reactome release 97 · read · Reactome downloads"NCBI2Reactome_All_Levels.txt" and "Ensembl2Reactome_All_Levels.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.

03The hierarchy

Parents and children in this release's hierarchy

Reactome's hierarchy is a graph rather than a tree: a pathway can sit under more than one parent, and the gene counts are each pathway's own placements at every level under it, so a parent's count is not the sum of its children's.

  • Reactome, the human pathway list and hierarchy relationship file · Reactome release 97 · read · Reactome downloads"ReactomePathways.txt" and "ReactomePathwaysRelation.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.