Pathway Human Homo sapiens
Metabolism of lipids
R-HSA-556833 in Reactome release 97: under Metabolism, with 758 genes placed in it by the mapping files and 10 child pathways in the hierarchy.
The same number in the other species
Reactome writes the mouse and rat events it infers from a human pathway under the human number with the species token. A door opens only where that species' own list in this release holds the id: R-MMU-556833 (mouse), R-RNO-556833 (rat). Whether the event was inferred from this one is what the record says.
01The record
Reactome's own record of this pathway
What this tells you
The pathway list, the hierarchy and the genes on this page are read from the files Reactome publishes for Reactome release 97, built into this site on 2026-09-09: the pathway list, the hierarchy relationship file and the two gene mapping files. The record card is the one live read, Reactome's own record of this pathway.
Reactome's download page describes the mapping files: Mapping files link the source database identifier to the lowest level pathway diagram or subset of the pathway, all levels of the pathway hierarchy or database identifier to all reactions.
[R13] The gene list here is the all-levels mapping of NCBI Gene ids, filled from the all-levels mapping of Ensembl ids where the NCBI file has no row for a gene; each row names which file it came from by the shape of its source id. Each row carries the evidence codes the file writes for it, as written and unranked, and both where the file writes both; no page of Reactome's documentation the survey read defines the codes, so this page does not expand them. A gene id the identity files do not name is kept as the source's own id with no door rather than turned into a symbol.
On citing what a search finds, Reactome says: It should be remembered that while we strive to contain the most current and accurate data, Reactome should not be used in citations where other primary sources of information are available.
[R12] The record card prints the literature Reactome attaches to a curated pathway for that reason. The data are public domain: All data in the Reactome database and files derived from that data are licensed under the Creative Commons Public Domain Dedication (CC0). User may copy, modify, and distribute these data, even for commercial purposes, without asking for permission. Attribution is encouraged but not required.
[R10] The pathway illustrations are licensed apart, under CC BY 4.0, and none is shown here.
A gene on this list is one Reactome places in this pathway in this release, and that is all the row says: it does not say the gene is expressed in a tissue or associated with a disease, which are the other two explorers' questions, read from other sources. Reactome's papers of record are [R01] [R02].
- [R01] Ragueneau E, Gong C, Sinquin P, Sevilla C, Beavers D, Grentner A, et al. (2026). The Reactome Knowledgebase 2026. Nucleic Acids Research 54:D673-D681. PMID 41251150, doi 10.1093/nar/gkaf1223.
- [R02] Milacic M, Beavers D, Conley P, Gong C, Gillespie M, Griss J, et al. (2024). The Reactome Pathway Knowledgebase 2024. Nucleic Acids Research 52:D672-D678. PMID 37941124, doi 10.1093/nar/gkad1025.
- [R10] Reactome, reactome.org. License Agreement. https://reactome.org/license, read 2026-09-09.
- [R12] Reactome, reactome.org. Citing us. https://reactome.org/cite, read 2026-09-09.
- [R13] Reactome, reactome.org. Download. https://reactome.org/download-data, read 2026-09-09.
02The genes
Genes Reactome places in this human pathway
The mapping files place 758 genes in this human pathway; showing 501 to 600, in pages of 100, sorted by symbol for reading. The order carries no ranking.
| Gene | Authority id | Mapping file id | Evidence codes |
|---|---|---|---|
| GenePECR | AuthorityHGNC:18281 | Mapping file id55825 NCBI file | EvidenceTAS |
| GenePEMT | AuthorityHGNC:8830 | Mapping file id10400 NCBI file | EvidenceTAS |
| GenePEX11A | AuthorityHGNC:8852 | Mapping file id8800 NCBI file | EvidenceTAS |
| GenePGP | AuthorityHGNC:8909 | Mapping file id283871 NCBI file | EvidenceTAS |
| GenePGS1 | AuthorityHGNC:30029 | Mapping file id9489 NCBI file | EvidenceIEA |
| GenePHOSPHO1 | AuthorityHGNC:16815 | Mapping file id162466 NCBI file | EvidenceTAS |
| GenePHYH | AuthorityHGNC:8940 | Mapping file id5264 NCBI file | EvidenceTAS |
| GenePI4K2A | AuthorityHGNC:30031 | Mapping file id55361 NCBI file | EvidenceTAS |
| GenePI4K2B | AuthorityHGNC:18215 | Mapping file id55300 NCBI file | EvidenceTAS |
| GenePI4KA | AuthorityHGNC:8983 | Mapping file id5297 NCBI file | EvidenceTAS |
| GenePI4KB | AuthorityHGNC:8984 | Mapping file id5298 NCBI file | EvidenceTAS |
| GenePIAS4 | AuthorityHGNC:17002 | Mapping file id51588 NCBI file | EvidenceTAS |
| GenePIK3C2A | AuthorityHGNC:8971 | Mapping file id5286 NCBI file | EvidenceTAS |
| GenePIK3C2B | AuthorityHGNC:8972 | Mapping file id5287 NCBI file | EvidenceTAS |
| GenePIK3C2G | AuthorityHGNC:8973 | Mapping file id5288 NCBI file | EvidenceTAS |
| GenePIK3C3 | AuthorityHGNC:8974 | Mapping file id5289 NCBI file | EvidenceTAS |
| GenePIK3CA | AuthorityHGNC:8975 | Mapping file id5290 NCBI file | EvidenceTAS |
| GenePIK3CB | AuthorityHGNC:8976 | Mapping file id5291 NCBI file | EvidenceTAS |
| GenePIK3CD | AuthorityHGNC:8977 | Mapping file id5293 NCBI file | EvidenceTAS |
| GenePIK3CG | AuthorityHGNC:8978 | Mapping file id5294 NCBI file | EvidenceTAS |
| GenePIK3R1 | AuthorityHGNC:8979 | Mapping file id5295 NCBI file | EvidenceTAS |
| GenePIK3R2 | AuthorityHGNC:8980 | Mapping file id5296 NCBI file | EvidenceTAS |
| GenePIK3R3 | AuthorityHGNC:8981 | Mapping file id8503 NCBI file | EvidenceTAS |
| GenePIK3R4 | AuthorityHGNC:8982 | Mapping file id30849 NCBI file | EvidenceTAS |
| GenePIK3R5 | AuthorityHGNC:30035 | Mapping file id23533 NCBI file | EvidenceTAS |
| GenePIK3R6 | AuthorityHGNC:27101 | Mapping file id146850 NCBI file | EvidenceTAS |
| GenePIKFYVE | AuthorityHGNC:23785 | Mapping file id200576 NCBI file | EvidenceIEA, TAS |
| GenePIP4K2A | AuthorityHGNC:8997 | Mapping file id5305 NCBI file | EvidenceTAS |
| GenePIP4K2B | AuthorityHGNC:8998 | Mapping file id8396 NCBI file | EvidenceTAS |
| GenePIP4K2C | AuthorityHGNC:23786 | Mapping file id79837 NCBI file | EvidenceTAS |
| GenePIP4P1 | AuthorityHGNC:19299 | Mapping file id90809 NCBI file | EvidenceTAS |
| GenePIP5K1A | AuthorityHGNC:8994 | Mapping file id8394 NCBI file | EvidenceTAS |
| GenePIP5K1B | AuthorityHGNC:8995 | Mapping file id8395 NCBI file | EvidenceTAS |
| GenePIP5K1C | AuthorityHGNC:8996 | Mapping file id23396 NCBI file | EvidenceTAS |
| GenePISD | AuthorityHGNC:8999 | Mapping file id23761 NCBI file | EvidenceIEA |
| GenePITPNB | AuthorityHGNC:9002 | Mapping file id23760 NCBI file | EvidenceTAS |
| GenePITPNM1 | AuthorityHGNC:9003 | Mapping file id9600 NCBI file | EvidenceTAS |
| GenePITPNM2 | AuthorityHGNC:21044 | Mapping file id57605 NCBI file | EvidenceTAS |
| GenePITPNM3 | AuthorityHGNC:21043 | Mapping file id83394 NCBI file | EvidenceTAS |
| GenePLA1A | AuthorityHGNC:17661 | Mapping file id51365 NCBI file | EvidenceTAS |
| GenePLA2G10 | AuthorityHGNC:9029 | Mapping file id8399 NCBI file | EvidenceTAS |
| GenePLA2G12A | AuthorityHGNC:18554 | Mapping file id81579 NCBI file | EvidenceTAS |
| GenePLA2G15 | AuthorityHGNC:17163 | Mapping file id23659 NCBI file | EvidenceTAS |
| GenePLA2G1B | AuthorityHGNC:9030 | Mapping file id5319 NCBI file | EvidenceTAS |
| GenePLA2G2A | AuthorityHGNC:9031 | Mapping file id5320 NCBI file | EvidenceTAS |
| GenePLA2G2D | AuthorityHGNC:9033 | Mapping file id26279 NCBI file | EvidenceTAS |
| GenePLA2G2E | AuthorityHGNC:13414 | Mapping file id30814 NCBI file | EvidenceTAS |
| GenePLA2G2F | AuthorityHGNC:30040 | Mapping file id64600 NCBI file | EvidenceTAS |
| GenePLA2G3 | AuthorityHGNC:17934 | Mapping file id50487 NCBI file | EvidenceTAS |
| GenePLA2G4A | AuthorityHGNC:9035 | Mapping file id5321 NCBI file | EvidenceTAS |
| GenePLA2G4B | AuthorityHGNC:9036 | Mapping file id100137049 NCBI file | EvidenceTAS |
| GenePLA2G4C | AuthorityHGNC:9037 | Mapping file id8605 NCBI file | EvidenceTAS |
| GenePLA2G4D | AuthorityHGNC:30038 | Mapping file id283748 NCBI file | EvidenceTAS |
| GenePLA2G4E | AuthorityHGNC:24791 | Mapping file id123745 NCBI file | EvidenceTAS |
| GenePLA2G4F | AuthorityHGNC:27396 | Mapping file id255189 NCBI file | EvidenceTAS |
| GenePLA2G5 | AuthorityHGNC:9038 | Mapping file id5322 NCBI file | EvidenceTAS |
| GenePLA2G6 | AuthorityHGNC:9039 | Mapping file id8398 NCBI file | EvidenceIEA, TAS |
| GenePLA2R1 | AuthorityHGNC:9042 | Mapping file id22925 NCBI file | EvidenceTAS |
| GenePLAAT1 | AuthorityHGNC:14922 | Mapping file id57110 NCBI file | EvidenceTAS |
| GenePLAAT2 | AuthorityHGNC:17824 | Mapping file id54979 NCBI file | EvidenceTAS |
| GenePLAAT3 | AuthorityHGNC:17825 | Mapping file id11145 NCBI file | EvidenceTAS |
| GenePLAAT4 | AuthorityHGNC:9869 | Mapping file id5920 NCBI file | EvidenceTAS |
| GenePLAAT5 | AuthorityHGNC:24978 | Mapping file id117245 NCBI file | EvidenceTAS |
| GenePLB1 | AuthorityHGNC:30041 | Mapping file id151056 NCBI file | EvidenceTAS |
| GenePLBD1 | AuthorityHGNC:26215 | Mapping file id79887 NCBI file | EvidenceTAS |
| GenePLD1 | AuthorityHGNC:9067 | Mapping file id5337 NCBI file | EvidenceIEA, TAS |
| GenePLD2 | AuthorityHGNC:9068 | Mapping file id5338 NCBI file | EvidenceIEA, TAS |
| GenePLD3 | AuthorityHGNC:17158 | Mapping file id23646 NCBI file | EvidenceIEA |
| GenePLD4 | AuthorityHGNC:23792 | Mapping file id122618 NCBI file | EvidenceIEA |
| GenePLD6 | AuthorityHGNC:30447 | Mapping file id201164 NCBI file | EvidenceIEA, TAS |
| GenePLEKHA1 | AuthorityHGNC:14335 | Mapping file id59338 NCBI file | EvidenceTAS |
| GenePLEKHA2 | AuthorityHGNC:14336 | Mapping file id59339 NCBI file | EvidenceTAS |
| GenePLEKHA3 | AuthorityHGNC:14338 | Mapping file id65977 NCBI file | EvidenceTAS |
| GenePLEKHA4 | AuthorityHGNC:14339 | Mapping file id57664 NCBI file | EvidenceTAS |
| GenePLEKHA5 | AuthorityHGNC:30036 | Mapping file id54477 NCBI file | EvidenceTAS |
| GenePLEKHA6 | AuthorityHGNC:17053 | Mapping file id22874 NCBI file | EvidenceTAS |
| GenePLEKHA8 | AuthorityHGNC:30037 | Mapping file id84725 NCBI file | EvidenceTAS |
| GenePLIN1 | AuthorityHGNC:9076 | Mapping file id5346 NCBI file | EvidenceIEA |
| GenePLIN2 | AuthorityHGNC:248 | Mapping file id123 NCBI file | EvidenceTAS |
| GenePLIN3 | AuthorityHGNC:16893 | Mapping file id10226 NCBI file | EvidenceTAS |
| GenePLPP1 | AuthorityHGNC:9228 | Mapping file id8611 NCBI file | EvidenceTAS |
| GenePLPP2 | AuthorityHGNC:9230 | Mapping file id8612 NCBI file | EvidenceTAS |
| GenePLPP3 | AuthorityHGNC:9229 | Mapping file id8613 NCBI file | EvidenceTAS |
| GenePLPP6 | AuthorityHGNC:23682 | Mapping file id403313 NCBI file | EvidenceTAS |
| GenePMVK | AuthorityHGNC:9141 | Mapping file id10654 NCBI file | EvidenceTAS |
| GenePNPLA2 | AuthorityHGNC:30802 | Mapping file id57104 NCBI file | EvidenceTAS |
| GenePNPLA3 | AuthorityHGNC:18590 | Mapping file id80339 NCBI file | EvidenceTAS |
| GenePNPLA4 | AuthorityHGNC:24887 | Mapping file id8228 NCBI file | EvidenceTAS |
| GenePNPLA5 | AuthorityHGNC:24888 | Mapping file id150379 NCBI file | EvidenceTAS |
| GenePNPLA6 | AuthorityHGNC:16268 | Mapping file id10908 NCBI file | EvidenceTAS |
| GenePNPLA7 | AuthorityHGNC:24768 | Mapping file id375775 NCBI file | EvidenceIEA |
| GenePNPLA8 | AuthorityHGNC:28900 | Mapping file id50640 NCBI file | EvidenceTAS |
| GenePOMC | AuthorityHGNC:9201 | Mapping file id5443 NCBI file | EvidenceTAS |
| GenePON1 | AuthorityHGNC:9204 | Mapping file id5444 NCBI file | EvidenceTAS |
| GenePON2 | AuthorityHGNC:9205 | Mapping file id5445 NCBI file | EvidenceTAS |
| GenePON3 | AuthorityHGNC:9206 | Mapping file id5446 NCBI file | EvidenceTAS |
| GenePPARA | AuthorityHGNC:9232 | Mapping file id5465 NCBI file | EvidenceIEA, TAS |
| GenePPARD | AuthorityHGNC:9235 | Mapping file id5467 NCBI file | EvidenceTAS |
| GenePPARG | AuthorityHGNC:9236 | Mapping file id5468 NCBI file | EvidenceTAS |
| GenePPARGC1A | AuthorityHGNC:9237 | Mapping file id10891 NCBI file | EvidenceTAS |
Evidence codes on this page: IEA, TAS, as the mapping file writes them; a row carrying two was written twice by the file, once under each. The mapping file id says which file placed the gene: an NCBI Gene id from NCBI2Reactome_All_Levels.txt, an Ensembl gene id from Ensembl2Reactome_All_Levels.txt. The two files can disagree about a code, so a row's codes are the one file's view. Measured by this site's build over this release on 2026-09-09: of the 138,908 human pathway-gene pairs both files place, 207 (0.149 per cent, over 47 genes) carry TAS in the Ensembl file where the NCBI rows carry IEA alone.
- Reactome mapping files, the human rows for this pathway · Reactome release 97 · read · Reactome downloads"NCBI2Reactome_All_Levels.txt" and "Ensembl2Reactome_All_Levels.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.
03The hierarchy
Parents and children in this release's hierarchy
Children
- Biosynthesis of specialized proresolving mediators (SPMs)R-HSA-901867819 genes
- Fatty acid metabolismR-HSA-8978868175 genes
- Ketone body metabolismR-HSA-7418210 genes
- Lipid particle organizationR-HSA-89645726 genes
- Metabolism of steroidsR-HSA-8957322155 genes
- Phospholipid metabolismR-HSA-1483257212 genes
- Regulation of lipid metabolism by PPARalphaR-HSA-400206119 genes
- Sphingolipid metabolismR-HSA-428157107 genes
- Triglyceride metabolismR-HSA-897922738 genes
- Wax and plasmalogen biosynthesisR-HSA-88485847 genes
Reactome's hierarchy is a graph rather than a tree: a pathway can sit under more than one parent, and the gene counts are each pathway's own placements at every level under it, so a parent's count is not the sum of its children's.
- Reactome, the human pathway list and hierarchy relationship file · Reactome release 97 · read · Reactome downloads"ReactomePathways.txt" and "ReactomePathwaysRelation.txt", Reactome, release 97, https://reactome.org/download-data/ (date of access 2026-09-09). Data CC0; attribution encouraged.